File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/29aaf5009af6f5fc13e56610c3bc6c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-z4lec9ta because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:04:49,603 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:04:50,432 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:04:50,598 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:04:51,583 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:04:51,743 - cnv_pipe.batch.run_model - INFO - Processing cluster 817 with 132 probes
2026-06-05 14:04:52,118 - cnv_pipe.batch.run_model.cluster817 - INFO - Child process started for cluster 817 with 132 probes
2026-06-05 14:05:32,502 - cnv_pipe.batch.run_model.cluster817 - INFO - Child process finished cluster 817. Wrote cluster_817_samples.csv and cluster_817_params.csv
2026-06-05 14:05:32,503 - cnv_pipe.batch.run_model - INFO - Cluster 817 finished in 40.76 seconds. Status: SUCCESS