mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kej4j7ti because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:03:53,551 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:03:54,422 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:03:54,600 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:03:55,848 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:03:55,925 - cnv_pipe.batch.run_model - INFO - Processing cluster 754 with 183 probes
2026-06-05 14:03:56,314 - cnv_pipe.batch.run_model.cluster754 - INFO - Child process started for cluster 754 with 183 probes
2026-06-05 14:04:55,807 - cnv_pipe.batch.run_model.cluster754 - INFO - Child process finished cluster 754. Wrote cluster_754_samples.csv and cluster_754_params.csv
2026-06-05 14:04:55,808 - cnv_pipe.batch.run_model - INFO - Cluster 754 finished in 59.88 seconds. Status: SUCCESS