File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/6ac332344100f9fd9fd24961288264/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-f4vfozlg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:05:00,564 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:05:01,394 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:05:01,561 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:05:02,502 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:05:02,668 - cnv_pipe.batch.run_model - INFO - Processing cluster 1208 with 178 probes
2026-06-05 14:05:03,030 - cnv_pipe.batch.run_model.cluster1208 - INFO - Child process started for cluster 1208 with 178 probes
2026-06-05 14:05:56,521 - cnv_pipe.batch.run_model.cluster1208 - INFO - Child process finished cluster 1208. Wrote cluster_1208_samples.csv and cluster_1208_params.csv
2026-06-05 14:05:56,522 - cnv_pipe.batch.run_model - INFO - Cluster 1208 finished in 53.85 seconds. Status: SUCCESS