[2026-06-05T14:00:08.344727Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T14:00:08.347026Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T14:00:08.347040Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T14:00:08.347045Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T14:00:08.347049Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXi83sZA'
[2026-06-05T14:00:08.347053Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T14:00:08.347059Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T14:00:08.347063Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T14:00:08.347067Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-05T14:00:08.347071Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T14:00:08.347074Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T14:00:08.347078Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T14:00:08.347082Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T14:00:08.347086Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T14:00:08.347636Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T14:00:08.347762Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T14:00:08.354016Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T14:00:08.355048Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T14:00:08.355347Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T14:00:08.355638Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T14:00:08.355989Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.356454Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.356554Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.356628Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.356745Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.356812Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.356931Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.356994Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.357367Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.357684Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.357949Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.358092Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.358332Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.358475Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.358629Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.358990Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.359581Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.360040Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.361927Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.362342Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.362612Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.362847Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T14:00:08.363277Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.363397Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.363522Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.363588Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.363711Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.363778Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.363888Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.363956Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.364065Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.364136Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.364473Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.364886Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.365006Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.365074Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.365192Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.365256Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.365385Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.365454Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.365570Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.365632Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.365742Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.365811Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.366113Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.366508Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.366628Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.366691Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.366863Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.366930Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.367036Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.367104Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.367214Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.367279Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.367390Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.367450Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.367701Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.368384Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.368562Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.368717Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.368856Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.368923Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.369044Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.369109Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.369220Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.369378Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.369757Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.370320Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.370901Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.370969Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.371081Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.371147Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.371259Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.371345Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.373235Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.373885Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.374024Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.374096Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.374213Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.374281Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.374398Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.374464Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.374575Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.374640Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.374756Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.374825Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.375028Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.375251Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.375938Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.376006Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.376118Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.376183Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.376292Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.376356Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.376468Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.376528Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.376640Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.376702Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.392685Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.393297Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.393466Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.394652Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.394820Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.395334Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.395487Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.396057Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.396472Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.396957Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.397223Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.397825Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.398572Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.399239Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.399585Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T14:00:08.400346Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.401291Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T14:00:08.401931Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.403081Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.408789Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-05T14:00:08.411999Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T14:00:08.415530Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T14:00:08.419632Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-05T14:00:08.422756Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-05T14:00:08.424855Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-05T14:00:08.425571Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-05T14:00:08.429462Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-05T14:00:08.492182Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.493234Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.497621Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.499060Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.499912Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T14:00:08.504943Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-05T14:00:08.614667Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.614794Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.615914Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.616332Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.620535Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-05T14:00:09.224456Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-05T14:00:09.233617Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.234781Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.238066Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-05T14:00:09.500092Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.501154Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.504751Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T14:00:09.534066Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.535206Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.538540Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-05T14:00:09.567800Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.567894Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.569236Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.569807Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.575685Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-05T14:00:09.576603Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-05T14:00:09.579824Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.580798Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.584603Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T14:00:10.498879Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.500023Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.504182Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-05T14:00:10.533138Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.534336Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.538274Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-05T14:00:10.599462Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.600605Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.604558Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T14:00:10.665711Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.665876Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.666932Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.667376Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.673344Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T14:00:10.731595Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-05T14:00:10.733607Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.734746Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.738188Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-05T14:00:10.899821Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.900919Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.904282Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-05T14:00:10.965595Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.966576Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.970679Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-05T14:00:11.232109Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.233163Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.237271Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T14:00:11.298309Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.299436Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.302988Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T14:00:11.307703Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.308672Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.312651Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T14:00:11.341528Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.342564Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.346554Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-05T14:00:11.347211Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.348162Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.351695Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-05T14:00:11.412782Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.413932Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.417237Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T14:00:11.478721Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.479771Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.483048Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-05T14:00:11.544445Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.544557Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.545544Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.546087Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.550561Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-05T14:00:11.551973Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-05T14:00:11.611571Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.611659Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.612627Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.613032Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.616683Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T14:00:11.618065Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-05T14:00:11.678019Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.678121Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.679239Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.679647Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.683387Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T14:00:11.684844Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-05T14:00:11.744642Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.745695Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.749499Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-05T14:00:12.161556Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:12.162615Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:12.166320Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-05T14:00:12.227510Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:12.228530Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:12.232775Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T14:00:13.045925Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.046918Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.050807Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-05T14:00:13.212771Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.213851Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.217837Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-05T14:00:13.218857Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.220185Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.220777Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.223663Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.224273Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-05T14:00:13.227136Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-05T14:00:13.288319Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.288451Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.289489Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.289877Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.294118Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-05T14:00:13.295601Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-05T14:00:13.355105Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.356022Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.359727Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T14:00:13.471183Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.472275Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.476173Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-05T14:00:13.537375Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.538403Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.542044Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T14:00:13.603266Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.604277Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.607693Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T14:00:13.669447Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.670507Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.673885Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-05T14:00:13.735508Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.737179Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.737553Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.740391Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.742457Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T14:00:13.743728Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-05T14:00:13.804918Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.805014Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.805924Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.806262Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.811732Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T14:00:13.812247Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-05T14:00:13.839038Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.839984Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.844276Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-05T14:00:13.872650Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.873595Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.877341Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T14:00:13.881822Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.882433Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.886095Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T14:00:13.947161Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.947260Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.948127Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.948739Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T14:00:13.953347Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T14:00:13.954211Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T14:00:14.013853Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.013975Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.014828Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.015299Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.019806Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-05T14:00:14.021068Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T14:00:14.131271Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.132097Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.135745Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-05T14:00:14.148481Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.149355Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.152850Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-05T14:00:14.181754Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.182605Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.186245Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T14:00:14.186525Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.187107Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.191092Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-05T14:00:14.252023Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.252983Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.256585Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T14:00:14.317741Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.318732Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.322223Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-05T14:00:14.584753Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.585635Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.589155Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T14:00:14.751007Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.751129Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.751882Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.752426Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.757122Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-05T14:00:14.758724Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T14:00:14.818154Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.818254Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.819142Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.819541Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.823249Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-05T14:00:14.824769Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-05T14:00:14.884477Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.885328Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.889099Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-05T14:00:14.950471Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.951213Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.954703Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T14:00:14.955602Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.956156Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:14.959744Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-05T14:00:15.020670Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.020788Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.021537Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.022118Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.026034Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-05T14:00:15.026614Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T14:00:15.087164Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.087304Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.088000Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.088398Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.093385Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-05T14:00:15.907156Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.907942Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.911611Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-05T14:00:15.972468Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.973234Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.976507Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-05T14:00:16.037799Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.038557Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.042457Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-05T14:00:16.103354Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.104090Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.107014Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T14:00:16.168766Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.168864Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.169498Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.169850Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.173254Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T14:00:16.174307Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-05T14:00:16.234879Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.234993Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.235590Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.236092Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.239576Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T14:00:16.240634Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-05T14:00:16.301074Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.301171Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.301749Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.304930Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T14:00:16.334050Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.950017Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.950656Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:16.953965Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T14:00:17.015141Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.079430Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.079936Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.082996Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-05T14:00:17.144226Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.459114Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.459619Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.463017Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-05T14:00:17.469551Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-05T14:00:17.476062Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.476132Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.476560Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.476947Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.479984Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-05T14:00:17.480930Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-05T14:00:17.492981Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.508841Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:17.508911Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.724066Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.724625Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.727675Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-05T14:00:22.789050Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.789355Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.789493Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.789922Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.790364Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.794807Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T14:00:22.796258Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T14:00:22.797470Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T14:00:22.823863Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.823938Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.824139Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.824573Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.825259Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.827823Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T14:00:22.828840Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T14:00:22.858025Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.858102Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.858291Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T14:00:22.861163Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T14:00:22.890510Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:27.317539Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T14:00:41.466593Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T14:00:41.466593Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] 
[2026-06-05T14:00:41.466593Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T14:00:41.466677Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] 
[2026-06-05T14:00:41.466685Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T14:00:41.466693Z] [nf-7fc1d9e8aa2d9711e208cbc7af20d882-d0204-vgpfw] [628_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec