File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/298f68c2a80aaca50ee905199a6cbb/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5uegn2q5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:03:47,960 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:03:48,886 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:03:49,067 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:03:50,131 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:03:50,317 - cnv_pipe.batch.run_model - INFO - Processing cluster 670 with 151 probes
2026-06-05 14:03:50,714 - cnv_pipe.batch.run_model.cluster670 - INFO - Child process started for cluster 670 with 151 probes
2026-06-05 14:04:39,515 - cnv_pipe.batch.run_model.cluster670 - INFO - Child process finished cluster 670. Wrote cluster_670_samples.csv and cluster_670_params.csv
2026-06-05 14:04:39,516 - cnv_pipe.batch.run_model - INFO - Cluster 670 finished in 49.20 seconds. Status: SUCCESS