[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUqHzGw/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUqHzGw/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUqHzGw/chr20_14085521-14085828.bed.gz.tbi
[2026-06-05T14:00:00.493893Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T14:00:00.494889Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T14:00:00.494898Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T14:00:00.494902Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T14:00:00.494906Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXUqHzGw'
[2026-06-05T14:00:00.494910Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T14:00:00.494915Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T14:00:00.494919Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T14:00:00.494923Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-05T14:00:00.494927Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T14:00:00.494930Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T14:00:00.494933Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T14:00:00.494937Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T14:00:00.494941Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T14:00:00.495819Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T14:00:00.495963Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T14:00:00.501906Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T14:00:00.502878Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T14:00:00.503166Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T14:00:00.503431Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T14:00:00.503668Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.504469Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.504785Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.505067Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.505243Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.505623Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.505729Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.506020Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.506367Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.507025Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.507195Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.509497Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.509942Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T14:00:00.510015Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.510267Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.510586Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.511012Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.511098Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.511223Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.511298Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.511499Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.511590Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.511738Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.511826Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.511952Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.512023Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.512351Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.512693Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.512835Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.512918Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.513048Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.513137Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.513260Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.513332Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.513451Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.513523Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.513645Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.513901Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.514302Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.514374Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.514499Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.514571Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.514716Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.514791Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.514919Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.514996Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.515117Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.515187Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.515652Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.516045Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.516174Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.516256Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.516379Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.516456Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.516573Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.516639Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.516754Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.516822Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.516939Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.517005Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.517197Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.517322Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.517870Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.517950Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.518081Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.518161Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.518282Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.518347Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.519251Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.519651Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.519788Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.519862Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.519993Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.520063Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.521597Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.522233Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.522668Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.523230Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.523361Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.523428Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.523551Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.523617Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.523787Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.523863Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.523980Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.524060Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.524175Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.524304Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.524602Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.525308Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.525451Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.525530Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.525653Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.525734Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.525864Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.525939Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.526067Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.526140Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.541807Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.542505Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.542680Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.543622Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.543864Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.544171Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.544262Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.544783Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.545105Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.545649Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.545833Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.546957Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.547339Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.547849Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T14:00:00.548080Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.548839Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T14:00:00.549261Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.550479Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.553909Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.554331Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-05T14:00:00.558999Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T14:00:00.565205Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T14:00:00.568382Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T14:00:00.568789Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-05T14:00:00.571400Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-05T14:00:00.575520Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-05T14:00:00.576918Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T14:00:00.691154Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.691250Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.691286Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.692259Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.692696Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.693043Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.700933Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T14:00:00.702704Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-05T14:00:00.704234Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T14:00:00.812298Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.812405Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.813537Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.813940Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.818157Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T14:00:00.819399Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-05T14:00:00.878990Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.880120Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-05T14:00:00.884187Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-05T14:00:01.296325Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.297446Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.301128Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-05T14:00:01.612832Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.613894Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.617223Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-05T14:00:02.179995Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.180099Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.181129Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.181551Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.186169Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T14:00:02.187220Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T14:00:02.247071Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.247201Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.248296Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.249135Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.252480Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-05T14:00:02.254425Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-05T14:00:02.313601Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.314716Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.318147Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-05T14:00:02.347329Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.348442Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.351827Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-05T14:00:02.664109Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.665171Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.668391Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-05T14:00:02.729663Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.730785Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.734272Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-05T14:00:03.096421Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.097430Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.100720Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-05T14:00:03.161875Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.163077Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.166301Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-05T14:00:03.227956Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.229004Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.232160Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T14:00:03.293332Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.294326Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.297532Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T14:00:03.358930Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.359047Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.359963Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.360322Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.364000Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T14:00:03.406912Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T14:00:03.425170Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.425253Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.426191Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.426543Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.430080Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T14:00:03.431578Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-05T14:00:03.458925Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.459974Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.463341Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T14:00:03.464142Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.465041Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.468036Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-05T14:00:03.529299Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.529399Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.530373Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.530777Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.534392Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T14:00:03.566653Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-05T14:00:03.595848Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.595956Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.596902Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.597225Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.600987Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-05T14:00:03.602221Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-05T14:00:03.662423Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.663500Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.667364Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-05T14:00:04.530686Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.531685Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.535941Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-05T14:00:04.596212Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.597286Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.600643Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T14:00:04.661694Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.662765Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.665858Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T14:00:04.727423Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.728474Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.731979Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-05T14:00:04.793195Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.793311Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.794225Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.794633Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.798126Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-05T14:00:04.831417Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-05T14:00:04.859385Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.860390Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.864446Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T14:00:04.975342Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.976328Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.979615Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-05T14:00:05.040956Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.041921Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.045353Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-05T14:00:05.307406Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.308378Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.311645Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-05T14:00:05.372955Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.373880Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.377573Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-05T14:00:05.488937Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.489875Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.493446Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-05T14:00:05.554328Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.555138Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.558556Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T14:00:05.669985Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.670080Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.670932Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.671307Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.675742Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-05T14:00:05.733300Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T14:00:05.736978Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.737050Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.737879Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.738291Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.741637Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-05T14:00:05.742487Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T14:00:05.802935Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.803034Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.803074Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.803877Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.804289Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.804855Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.807215Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-05T14:00:05.810016Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-05T14:00:05.811374Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-05T14:00:05.871339Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.871452Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.872308Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.872967Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.876438Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-05T14:00:05.877495Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-05T14:00:05.939308Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.939420Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.940330Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.940859Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.945197Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-05T14:00:05.946322Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T14:00:06.006122Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.006955Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.011296Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T14:00:06.072496Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.073525Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.077579Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-05T14:00:06.188743Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.189478Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.193274Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T14:00:06.254182Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.254977Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.258611Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T14:00:06.319725Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.320607Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.324200Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-05T14:00:06.385259Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.386078Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.389552Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T14:00:06.450719Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.451571Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.455076Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-05T14:00:06.516188Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.516976Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.520328Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T14:00:06.581855Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.582756Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.587366Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T14:00:06.648360Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.649130Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.652539Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-05T14:00:06.713815Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.713932Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.714608Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.715446Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.720329Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-05T14:00:06.721837Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-05T14:00:06.782958Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.783722Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.787812Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-05T14:00:07.149551Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.150331Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.154046Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T14:00:07.415896Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.416649Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.420793Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-05T14:00:07.449687Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.450444Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.453776Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-05T14:00:07.458602Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.459239Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.462926Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-05T14:00:07.524009Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.524787Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.528544Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-05T14:00:07.589691Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.590509Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.593828Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T14:00:07.623095Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.623710Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.627423Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-05T14:00:07.628250Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.628853Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.632463Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-05T14:00:07.661436Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.662164Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.665802Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-05T14:00:07.666062Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.666541Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.669930Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T14:00:07.698886Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.699596Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.703213Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T14:00:07.704161Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.704942Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.708414Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-05T14:00:07.737547Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.738223Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.742272Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-05T14:00:07.746823Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.262554Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.262739Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.263360Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.264234Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.267901Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-05T14:00:08.269286Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-05T14:00:08.269784Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.270356Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.273947Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-05T14:00:08.303019Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.304693Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.308185Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.723062Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.723612Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.726930Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T14:00:08.788050Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.788695Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.791899Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T14:00:08.853016Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.318613Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.319195Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.322212Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-05T14:00:09.383891Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.200280Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.200876Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.204168Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-05T14:00:10.265464Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.191802Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.192366Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.195288Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-05T14:00:15.224659Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.224986Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.225119Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.225648Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.226663Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.230152Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T14:00:15.231624Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T14:00:15.232369Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T14:00:15.260045Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.260105Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.260126Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.260313Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.260742Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.263354Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T14:00:15.289346Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T14:00:15.293249Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.293313Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.293496Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T14:00:15.296027Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T14:00:15.325405Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:19.499504Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T14:00:33.614665Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T14:00:33.614665Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] 
[2026-06-05T14:00:33.614665Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T14:00:33.614748Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] 
[2026-06-05T14:00:33.614757Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T14:00:33.614764Z] [nf-7e374ee5957b89bb366503e82b34a936-9d42d-56bfr] [626_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec