File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6d/098bad8ff29e947392bdd8e3649b7a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6qslbt6w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:04:53,456 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:04:54,351 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:04:54,529 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:04:55,534 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:04:55,714 - cnv_pipe.batch.run_model - INFO - Processing cluster 1165 with 191 probes
2026-06-05 14:04:56,088 - cnv_pipe.batch.run_model.cluster1165 - INFO - Child process started for cluster 1165 with 191 probes
2026-06-05 14:05:54,323 - cnv_pipe.batch.run_model.cluster1165 - INFO - Child process finished cluster 1165. Wrote cluster_1165_samples.csv and cluster_1165_params.csv
2026-06-05 14:05:54,325 - cnv_pipe.batch.run_model - INFO - Cluster 1165 finished in 58.61 seconds. Status: SUCCESS