File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/52af33185951b402f408d2712d0097/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oh7l32l2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:01:54,442 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:01:55,378 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:01:55,568 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:01:56,664 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:01:56,824 - cnv_pipe.batch.run_model - INFO - Processing cluster 105 with 140 probes
2026-06-05 14:01:57,236 - cnv_pipe.batch.run_model.cluster105 - INFO - Child process started for cluster 105 with 140 probes
2026-06-05 14:02:40,936 - cnv_pipe.batch.run_model.cluster105 - INFO - Child process finished cluster 105. Wrote cluster_105_samples.csv and cluster_105_params.csv
2026-06-05 14:02:40,937 - cnv_pipe.batch.run_model - INFO - Cluster 105 finished in 44.11 seconds. Status: SUCCESS