Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/dea1054c423a19b06f5aa115e2e6ff/.command.sh
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/509fa580b3dd16e8438dcd8edd0905/Sig_18_tissue.recalibrated.bam
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/509fa580b3dd16e8438dcd8edd0905/Sig_18_tissue.recalibrated.bam.bai
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/dea1054c423a19b06f5aa115e2e6ff/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
==> STAGING COMPLETE (10 inputs)
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX8BVsRv/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX8BVsRv/chr6_138229684-138229952.bed.gz.tbi
Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:
/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX8BVsRv/chr6_138229684-138229952.bed.gz.tbi
[2026-06-05T14:00:01.665759Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T14:00:01.666585Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T14:00:01.666594Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T14:00:01.666599Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T14:00:01.666603Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX8BVsRv'
[2026-06-05T14:00:01.666607Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T14:00:01.666612Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T14:00:01.666616Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T14:00:01.666619Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-05T14:00:01.666623Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T14:00:01.666627Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T14:00:01.666630Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T14:00:01.666634Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T14:00:01.666638Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T14:00:01.667207Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T14:00:01.667325Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T14:00:01.673633Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T14:00:01.674381Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T14:00:01.674640Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T14:00:01.675141Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T14:00:01.675505Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.676111Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.676213Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.676288Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.676425Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.676494Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.677031Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.677216Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.677504Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.678215Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.678528Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.678863Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.680818Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.681254Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T14:00:01.681649Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.681880Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.682408Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.682705Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.683028Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.683132Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.683335Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.683405Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.683519Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.683589Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.683703Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.683780Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.683911Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.683980Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.684531Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.684715Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.685212Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.685418Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.685544Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.685609Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.685723Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.685786Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.685897Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.685970Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.686082Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.686145Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.686260Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.686323Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.686524Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.687008Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.687123Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.687187Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.687301Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.687426Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.687550Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.687618Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.687728Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.687812Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.687931Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.688029Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.688495Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.688902Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.689021Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.689094Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.689203Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.689268Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.689384Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.689449Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.689558Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.689630Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.689738Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.689821Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.690036Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.690602Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.690726Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.690792Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.690906Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.690971Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.691080Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.691147Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.693033Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.693713Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.693862Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.693935Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.694049Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.694116Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.694234Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.694303Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.694422Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.694485Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.694596Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.694666Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.694782Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.694933Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.695659Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.695726Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.695862Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.695936Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.696049Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.696114Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.696277Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.696339Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.696458Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.696520Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.696657Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.696723Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.697219Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.697966Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.698089Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.698153Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.698263Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.698330Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.698437Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.698501Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.698616Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.698683Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.701664Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.702456Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.702846Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.702935Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.718316Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.718867Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.719033Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.719337Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.719537Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.720628Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.720814Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.721320Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.721526Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.721799Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.722548Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.723129Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.723703Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.724451Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T14:00:01.725157Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T14:00:01.725379Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.726496Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.730039Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.730231Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T14:00:01.731102Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.736353Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-05T14:00:01.741388Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-05T14:00:01.741967Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-05T14:00:01.745790Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-05T14:00:01.746741Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-05T14:00:01.750555Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T14:00:01.751475Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-05T14:00:01.915394Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.916659Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.920539Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-05T14:00:02.432869Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.434193Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:02.437793Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-05T14:00:03.351715Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.351849Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.353110Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.353547Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.357354Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T14:00:03.358853Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-05T14:00:03.361990Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.363179Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.366408Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-05T14:00:03.395355Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.396669Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.400463Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T14:00:03.429152Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.430398Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.434190Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-05T14:00:03.446764Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.447934Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.451613Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-05T14:00:03.464276Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.465404Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.468852Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-05T14:00:03.730788Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.732083Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.735699Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T14:00:03.796906Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.798144Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:03.801896Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-05T14:00:04.163793Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.164998Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.168386Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-05T14:00:04.229661Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.230850Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.233949Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-05T14:00:04.295291Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.296527Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.299880Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-05T14:00:04.361128Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.362322Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.365978Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-05T14:00:04.426975Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.428208Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.431179Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-05T14:00:04.460661Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.461847Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.466039Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.466450Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-05T14:00:04.467637Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.473378Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T14:00:04.683132Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.684287Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.687311Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-05T14:00:04.748900Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.750069Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:04.753668Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-05T14:00:05.215741Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.216874Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.220882Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-05T14:00:05.432256Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.432357Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.433574Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.433985Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.438201Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T14:00:05.501702Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-05T14:00:05.549715Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.550876Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.554308Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T14:00:05.665873Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.667027Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.670544Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T14:00:05.731828Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.733082Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.737174Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-05T14:00:05.948572Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.949709Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.953191Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-05T14:00:05.982348Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.983545Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.985881Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.987127Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:05.987769Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T14:00:05.990302Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-05T14:00:06.051794Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.052959Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.057044Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-05T14:00:06.117736Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.118818Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.122886Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-05T14:00:06.283592Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.284714Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.288227Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-05T14:00:06.349651Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.350731Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.354258Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-05T14:00:06.415662Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.416778Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.420059Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T14:00:06.481609Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.482772Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.486420Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T14:00:06.515143Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.516202Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.519677Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-05T14:00:06.532497Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.533536Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.536694Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-05T14:00:06.541337Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.542115Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.545029Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-05T14:00:06.558180Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.559145Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.563344Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-05T14:00:06.576033Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.576989Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.580441Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-05T14:00:06.580713Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.581555Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.584562Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-05T14:00:06.597643Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.598580Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.601813Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-05T14:00:06.631389Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.631485Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.632445Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.632835Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.636658Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-05T14:00:06.638406Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-05T14:00:06.697680Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.698490Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.701597Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-05T14:00:06.763062Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.764092Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.767713Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T14:00:06.829033Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.830053Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.833745Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-05T14:00:06.894701Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.895701Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:06.899440Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-05T14:00:07.010582Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.011569Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.015185Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-05T14:00:07.076243Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.077247Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.080626Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-05T14:00:07.191902Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.193033Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.196176Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-05T14:00:07.257633Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.258778Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.262307Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-05T14:00:07.623911Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.624823Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:07.627819Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-05T14:00:08.141227Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.142221Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.146293Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-05T14:00:08.207093Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.207184Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.208065Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.208448Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.212123Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-05T14:00:08.213650Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-05T14:00:08.273313Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.273422Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.274356Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.274735Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.279527Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T14:00:08.280299Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-05T14:00:08.339181Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.340133Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.343877Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-05T14:00:08.404696Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.405645Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.409315Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-05T14:00:08.470159Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.471105Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.474723Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-05T14:00:08.535820Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.536791Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.540432Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-05T14:00:08.601419Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.602342Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.606385Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-05T14:00:08.667207Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.668153Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.672020Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-05T14:00:08.883395Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.884319Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.887850Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-05T14:00:08.948756Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.949638Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:08.953236Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T14:00:09.014365Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.015203Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.018268Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-05T14:00:09.031052Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.031817Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.034503Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-05T14:00:09.047700Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.048860Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.049222Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.052221Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.053282Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-05T14:00:09.055663Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T14:00:09.068929Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.069689Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.072840Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T14:00:09.134032Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.134124Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.134883Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.135262Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.138710Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T14:00:09.139929Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T14:00:09.200239Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.200335Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.201072Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.201399Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.205759Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T14:00:09.206023Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T14:00:09.266680Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.266773Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.266797Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.267521Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.268103Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.268635Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.272088Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T14:00:09.275314Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T14:00:09.276277Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-05T14:00:09.334433Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.334537Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.335248Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.335615Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.339034Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T14:00:09.340347Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-05T14:00:09.400551Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.401321Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.404420Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-05T14:00:09.433591Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.434349Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.437027Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-05T14:00:09.438408Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.438938Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.441680Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T14:00:09.470875Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.471594Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.474655Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T14:00:09.503813Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.503915Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.504558Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.504937Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.508432Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-05T14:00:09.509754Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-05T14:00:09.569701Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.569777Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.570396Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.570799Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.574232Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-05T14:00:09.603643Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T14:00:09.636132Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.636228Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.636879Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.637264Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.641424Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-05T14:00:09.641959Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T14:00:09.654177Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.654818Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.657973Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-05T14:00:09.670591Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.671144Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.674659Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-05T14:00:09.703078Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.703168Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.704095Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.704371Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.704596Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.708752Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.709086Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-05T14:00:09.709635Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T14:00:09.712404Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T14:00:09.741076Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.741152Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.741697Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.742060Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.745565Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-05T14:00:09.746365Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-05T14:00:09.758334Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.758893Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.761867Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T14:00:09.790909Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.791516Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.794445Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-05T14:00:09.795186Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.827324Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.831193Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.831745Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T14:00:09.834566Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-05T14:00:09.863877Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.279154Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.279237Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.279262Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.279772Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.280221Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.280472Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.284182Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-05T14:00:10.285294Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-05T14:00:10.286895Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-05T14:00:10.313496Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.314056Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.316892Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-05T14:00:10.330325Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.330397Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.330422Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:10.362311Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.028040Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.028547Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.031237Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-05T14:00:11.092580Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.092956Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.093092Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.093524Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.093909Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.098802Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T14:00:11.100568Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T14:00:11.101274Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T14:00:11.126370Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.126447Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.126661Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.127138Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.130909Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.131229Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T14:00:11.131603Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T14:00:11.163015Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.163083Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.163257Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T14:00:11.165762Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T14:00:11.195267Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:12.312067Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T14:00:20.555033Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T14:00:20.555033Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner]
[2026-06-05T14:00:20.555033Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] workflow version: 2.9.10
[2026-06-05T14:00:20.555121Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner]
[2026-06-05T14:00:20.555129Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T14:00:20.555135Z] [nf-f0dea1054c423a19b06f5aa115e2e6ff-cf797-klngh] [635_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec