File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/2e29b3e8376fc16a1b6eeef7d44663/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ook9_a83 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:03:53,210 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:03:54,078 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:03:54,253 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:03:55,323 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:03:55,550 - cnv_pipe.batch.run_model - INFO - Processing cluster 757 with 173 probes
2026-06-05 14:03:55,942 - cnv_pipe.batch.run_model.cluster757 - INFO - Child process started for cluster 757 with 173 probes
2026-06-05 14:04:52,033 - cnv_pipe.batch.run_model.cluster757 - INFO - Child process finished cluster 757. Wrote cluster_757_samples.csv and cluster_757_params.csv
2026-06-05 14:04:52,034 - cnv_pipe.batch.run_model - INFO - Cluster 757 finished in 56.48 seconds. Status: SUCCESS