File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c5/1658d6ec0c2e967f6609acf325b357/.command.err
Size
86.1 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr4_22420786-22421189.bed)
Attempt

Content

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[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX8hrNlD/chr4_22420786-22421189.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX8hrNlD/chr4_22420786-22421189.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX8hrNlD/chr4_22420786-22421189.bed.gz.tbi
[2026-06-05T13:59:49.330625Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T13:59:49.331271Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T13:59:49.331286Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T13:59:49.331290Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T13:59:49.331295Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX8hrNlD'
[2026-06-05T13:59:49.331299Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T13:59:49.331304Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T13:59:49.331308Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T13:59:49.331312Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] [RunParameters] memMb: 3096076
[2026-06-05T13:59:49.331315Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T13:59:49.331319Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T13:59:49.331323Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T13:59:49.331326Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T13:59:49.331330Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T13:59:49.332161Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T13:59:49.332221Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T13:59:49.337904Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T13:59:49.338608Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T13:59:49.339087Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T13:59:49.339396Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T13:59:49.339631Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.340072Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.340169Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.340242Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.340357Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.340423Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.340539Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.340602Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.340993Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.341117Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T13:59:49.341333Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.341474Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.341538Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.341649Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.341950Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.342381Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.342585Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.342785Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.344647Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.345039Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T13:59:49.345741Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.345866Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.346001Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.346075Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.346191Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.346337Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.347006Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.347114Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.347241Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.347313Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.347431Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.347500Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.347977Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.348171Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.348314Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.348383Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.348494Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.348557Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.348669Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.348739Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.348851Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.348913Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.349023Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.349087Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.349204Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.349285Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.349791Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.350124Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.350360Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.350439Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.350547Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.350615Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.350725Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.350786Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.350896Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.350960Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.351066Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.351162Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.351544Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.352060Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.352192Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.352253Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.352361Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.352426Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.352536Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.352606Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.352717Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.352780Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.352891Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.352956Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.353187Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.353941Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.354146Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.354226Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.355487Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.355642Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.355766Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.355986Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.356975Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.357111Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.357244Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.357314Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.357436Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.357499Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.357915Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.358376Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.358491Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.358562Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.358675Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.358802Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.358922Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.358988Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.359097Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.359169Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.359287Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.359349Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.373638Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.373740Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.373807Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.373991Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.374060Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.374218Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.374286Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.374412Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.374479Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T13:59:49.374526Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T13:59:49.377308Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:49.378162Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:49.378729Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:49.379471Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:49.381577Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:49.383420Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T13:59:49.384082Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:49.385201Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:49.390358Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-06-05T13:59:49.391020Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T13:59:49.393920Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:49.394302Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T13:59:49.396425Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:49.397755Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T13:59:49.403494Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T13:59:49.406389Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-06-05T13:59:49.407716Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-06-05T13:59:50.316841Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.318001Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.321587Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-06-05T13:59:50.532949Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.534092Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.537324Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T13:59:50.749077Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.750561Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.754106Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T13:59:50.783050Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.784570Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.788293Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-06-05T13:59:50.817245Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.818670Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.821728Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T13:59:50.850944Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.852421Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.856188Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T13:59:50.966929Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.968322Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:50.971725Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-06-05T13:59:51.032613Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.034003Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.037543Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T13:59:51.098433Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.099807Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.103832Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-06-05T13:59:51.465213Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.465348Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.466718Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.467335Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.472121Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T13:59:51.473017Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-06-05T13:59:51.583021Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.584420Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.588043Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T13:59:51.648958Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.650406Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.653957Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-06-05T13:59:51.715141Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.716438Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.719941Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T13:59:51.981420Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.982504Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.986797Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T13:59:52.047105Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.048207Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.051803Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T13:59:52.414106Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.415145Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.418468Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T13:59:52.480151Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.480280Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.481365Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.481974Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.486640Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T13:59:52.522487Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T13:59:52.548038Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.548151Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.549180Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.549938Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.554077Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T13:59:52.555595Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T13:59:52.616390Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.617787Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.618585Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.621317Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.622229Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-06-05T13:59:52.625056Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T13:59:52.654076Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.655107Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.658455Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-06-05T13:59:52.687737Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.688698Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.692112Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T13:59:52.696547Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.697442Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.701218Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T13:59:52.730069Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.730179Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.731202Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.732035Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.735597Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T13:59:52.736875Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T13:59:52.798508Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.798621Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.799567Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.800439Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.804176Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-06-05T13:59:52.805407Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T13:59:52.915513Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.916526Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.919768Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-06-05T13:59:52.981034Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.982063Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.985612Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-06-05T13:59:53.397777Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.398982Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.402603Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T13:59:53.613851Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.615082Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.618400Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T13:59:53.679451Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.680877Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.684557Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T13:59:53.713663Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.714803Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.718046Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-06-05T13:59:53.779237Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.780183Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.783801Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T13:59:53.812642Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.813574Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.816986Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T13:59:54.078507Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.079689Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.082920Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T13:59:54.144020Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.145223Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.148563Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T13:59:54.209734Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.210841Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.214716Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-06-05T13:59:54.275031Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.276126Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.279410Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-06-05T13:59:54.340462Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.340567Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.340602Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.341450Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.341953Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.342389Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.346195Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T13:59:54.348303Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T13:59:54.349753Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T13:59:54.406588Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.407476Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.410673Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T13:59:54.522228Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.523095Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.526551Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T13:59:54.938404Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.939254Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.943306Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T13:59:55.003578Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.003685Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.003712Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.004425Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.005172Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.005846Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.008998Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-06-05T13:59:55.011827Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-06-05T13:59:55.012617Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T13:59:55.074136Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.074929Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.078476Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T13:59:55.139392Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.140190Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.143629Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-06-05T13:59:55.505982Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.506782Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.510030Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T13:59:55.571521Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.572338Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.575317Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T13:59:55.637138Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.637943Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.640722Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.641595Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.642018Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T13:59:55.645001Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T13:59:55.705897Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.706683Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.710330Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-06-05T13:59:56.021795Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.022553Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.025510Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T13:59:56.088379Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.089110Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.093236Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T13:59:56.154195Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.154926Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.158207Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T13:59:56.219471Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.220225Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.223705Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T13:59:56.284820Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.285591Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.289616Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-06-05T13:59:56.500748Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.501547Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.505236Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T13:59:56.566313Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.567032Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.571448Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T13:59:56.681979Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.682788Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.686595Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T13:59:56.748039Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.748724Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.752496Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T13:59:56.863800Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.864554Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.867716Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-06-05T13:59:56.896879Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.897531Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.900627Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-06-05T13:59:56.905724Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.906311Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.910069Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-06-05T13:59:56.939072Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.939748Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.942537Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.943351Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.943558Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-06-05T13:59:56.947028Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-06-05T13:59:57.008445Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.009109Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.012612Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T13:59:57.073807Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.074490Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.077679Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T13:59:57.090765Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.091389Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.095381Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-06-05T13:59:57.156265Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.156352Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.156383Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.156965Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.157706Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.157981Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.163803Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T13:59:57.164141Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T13:59:57.165289Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T13:59:57.224612Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.224721Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.224747Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.225315Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.227443Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.228648Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.229360Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T13:59:57.232808Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T13:59:57.234072Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-06-05T13:59:57.295215Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.295307Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.295349Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.295877Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.299522Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-06-05T13:59:57.361864Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.476130Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.476673Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.480394Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T13:59:57.541483Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.557391Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.557901Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.561788Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T13:59:57.622764Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.837175Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.837718Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.840915Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-06-05T13:59:57.903073Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.167548Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.168058Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.171754Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-06-05T13:59:58.232710Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.346871Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.347334Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.350243Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T13:59:58.379740Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.380060Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.380218Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.380987Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.383426Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.384989Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T13:59:58.386069Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T13:59:58.388289Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T13:59:58.417781Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.417860Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.417886Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.418136Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.419074Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.421890Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T13:59:58.422972Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T13:59:58.452644Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.452739Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.452975Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.455547Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T13:59:58.485535Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.901931Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T14:00:08.220208Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T14:00:08.220208Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] 
[2026-06-05T14:00:08.220208Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T14:00:08.220277Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] 
[2026-06-05T14:00:08.220284Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T14:00:08.220292Z] [nf-c51658d6ec0c2e967f6609acf325b357-a21ae-gwzxw] [606_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec