mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d5xlp5h6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:03:53,611 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:03:54,585 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:03:54,781 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:03:55,969 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:03:56,185 - cnv_pipe.batch.run_model - INFO - Processing cluster 742 with 187 probes
2026-06-05 14:03:56,595 - cnv_pipe.batch.run_model.cluster742 - INFO - Child process started for cluster 742 with 187 probes
2026-06-05 14:04:54,852 - cnv_pipe.batch.run_model.cluster742 - INFO - Child process finished cluster 742. Wrote cluster_742_samples.csv and cluster_742_params.csv
2026-06-05 14:04:54,854 - cnv_pipe.batch.run_model - INFO - Cluster 742 finished in 58.67 seconds. Status: SUCCESS