cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_tissue.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed Sig_18_tissue_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:148000001, elapsed 0.0s, est remaining 0.6s, peak mem 111MB, user 0.1s, sys 0.4s, output queue size 14
progress 10% @chr2:82000001, elapsed 0.1s, est remaining 0.5s, peak mem 111MB, user 0.3s, sys 1.1s, output queue size 22
progress 15% @chr2:237000001, elapsed 0.1s, est remaining 0.5s, peak mem 111MB, user 0.5s, sys 1.8s, output queue size 12
progress 20% @chr3:158000001, elapsed 0.1s, est remaining 0.4s, peak mem 111MB, user 0.7s, sys 2.3s, output queue size 4
progress 25% @chr4:103000001, elapsed 0.1s, est remaining 0.4s, peak mem 111MB, user 0.8s, sys 3.1s, output queue size 13
progress 30% @chr5:93000001, elapsed 0.2s, est remaining 0.4s, peak mem 111MB, user 0.9s, sys 3.7s, output queue size 10
progress 35% @chr6:59000001, elapsed 0.2s, est remaining 0.3s, peak mem 111MB, user 1.1s, sys 4.3s, output queue size 16
progress 40% @chr7:44000001, elapsed 0.2s, est remaining 0.3s, peak mem 111MB, user 1.2s, sys 5.0s, output queue size 14
progress 45% @chr8:37000001, elapsed 0.2s, est remaining 0.3s, peak mem 111MB, user 1.4s, sys 5.5s, output queue size 20
progress 50% @chr9:65000001, elapsed 0.3s, est remaining 0.3s, peak mem 111MB, user 1.5s, sys 6.3s, output queue size 8
progress 55% @chr10:79000001, elapsed 0.3s, est remaining 0.2s, peak mem 111MB, user 1.7s, sys 7.0s, output queue size 16
progress 60% @chr11:125000001, elapsed 0.3s, est remaining 0.2s, peak mem 111MB, user 1.8s, sys 7.5s, output queue size 9
progress 65% @chr13:5000001, elapsed 0.3s, est remaining 0.2s, peak mem 111MB, user 2.0s, sys 8.2s, output queue size 10
progress 70% @chr14:54000001, elapsed 0.4s, est remaining 0.2s, peak mem 111MB, user 2.2s, sys 8.8s, output queue size 7
progress 75% @chr16:5000001, elapsed 0.4s, est remaining 0.1s, peak mem 111MB, user 2.4s, sys 9.4s, output queue size 8
progress 80% @chr18:3000001, elapsed 0.4s, est remaining 0.1s, peak mem 111MB, user 2.5s, sys 10.1s, output queue size 17
progress 85% @chr20:5000001, elapsed 0.4s, est remaining 0.1s, peak mem 111MB, user 2.6s, sys 10.7s, output queue size 17
progress 90% @chrX:42000001, elapsed 0.5s, est remaining 0.1s, peak mem 132MB, user 3.0s, sys 11.1s, output queue size 114
progress 95% @chrY:39000001, elapsed 0.5s, est remaining 0.0s, peak mem 144MB, user 3.4s, sys 11.4s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.1s, est remaining 0.0s, peak mem 150MB, user 5.5s, sys 11.8s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50047058
reads: 1001838
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.312 user 5.467 sys 7.975 real
done: 1 calls 0.006 user 0.000 sys 0.012 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.002 user 0.001 sys 1.152 real
idle: 79 calls 0.019 user 0.030 sys 48.192 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 157372416 mem 6.103 user 12.467 sys 2.631 real