mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-q1wgpmfo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:05:03,763 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:05:04,614 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:05:04,782 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:05:05,752 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:05:05,920 - cnv_pipe.batch.run_model - INFO - Processing cluster 1231 with 199 probes
2026-06-05 14:05:06,287 - cnv_pipe.batch.run_model.cluster1231 - INFO - Child process started for cluster 1231 with 199 probes
2026-06-05 14:06:06,661 - cnv_pipe.batch.run_model.cluster1231 - INFO - Child process finished cluster 1231. Wrote cluster_1231_samples.csv and cluster_1231_params.csv
2026-06-05 14:06:06,663 - cnv_pipe.batch.run_model - INFO - Cluster 1231 finished in 60.74 seconds. Status: SUCCESS