#!/bin/bash -Ceuo pipefail tabix -l negative_somatic_control_2.snv_indel.merged.vcf.gz > negative_somatic_control_2.chromosomes.txt cat <<-END_VERSIONS > versions.yml "DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES": bcftools: $(bcftools --version 2>&1 | head -n1 | sed 's/^.*bcftools //; s/ .*$//') END_VERSIONS