mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8co0bymw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:03:51,011 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:03:52,316 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:03:52,598 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:03:54,318 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:03:54,592 - cnv_pipe.batch.run_model - INFO - Processing cluster 699 with 187 probes
2026-06-05 14:03:55,208 - cnv_pipe.batch.run_model.cluster699 - INFO - Child process started for cluster 699 with 187 probes
2026-06-05 14:05:26,227 - cnv_pipe.batch.run_model.cluster699 - INFO - Child process finished cluster 699. Wrote cluster_699_samples.csv and cluster_699_params.csv
2026-06-05 14:05:26,228 - cnv_pipe.batch.run_model - INFO - Cluster 699 finished in 91.64 seconds. Status: SUCCESS