File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/d4d7b6086e093ada5f09ee950a16ca/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oa127mmb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:05:24,990 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:05:25,834 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:05:26,005 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:05:27,091 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:05:27,159 - cnv_pipe.batch.run_model - INFO - Processing cluster 1355 with 192 probes
2026-06-05 14:05:27,530 - cnv_pipe.batch.run_model.cluster1355 - INFO - Child process started for cluster 1355 with 192 probes
2026-06-05 14:06:25,938 - cnv_pipe.batch.run_model.cluster1355 - INFO - Child process finished cluster 1355. Wrote cluster_1355_samples.csv and cluster_1355_params.csv
2026-06-05 14:06:25,940 - cnv_pipe.batch.run_model - INFO - Cluster 1355 finished in 58.78 seconds. Status: SUCCESS