File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/a5a8c825a7a16c8482af70eee65c2f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ps_pi2gl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:05:33,995 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:05:34,874 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:05:35,047 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:05:36,133 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:05:36,211 - cnv_pipe.batch.run_model - INFO - Processing cluster 1321 with 188 probes
2026-06-05 14:05:36,583 - cnv_pipe.batch.run_model.cluster1321 - INFO - Child process started for cluster 1321 with 188 probes
2026-06-05 14:06:32,931 - cnv_pipe.batch.run_model.cluster1321 - INFO - Child process finished cluster 1321. Wrote cluster_1321_samples.csv and cluster_1321_params.csv
2026-06-05 14:06:32,932 - cnv_pipe.batch.run_model - INFO - Cluster 1321 finished in 56.72 seconds. Status: SUCCESS