cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_Blood.md.bam --algo AlignmentStat Sig_18_Blood.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo Sig_18_Blood.sentieon.insert_size_metrics --algo QualDistribution Sig_18_Blood.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle Sig_18_Blood.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle Sig_18_Blood.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:162000001, elapsed 0.0s, est remaining 0.7s, peak mem 75MB, user 0.1s, sys 0.6s, output queue size 8
progress 10% @chr2:64000001, elapsed 0.1s, est remaining 0.6s, peak mem 75MB, user 0.3s, sys 1.4s, output queue size 15
progress 15% @chr2:220000001, elapsed 0.1s, est remaining 0.5s, peak mem 75MB, user 0.4s, sys 2.2s, output queue size 15
progress 20% @chr3:154000001, elapsed 0.1s, est remaining 0.5s, peak mem 75MB, user 0.6s, sys 2.9s, output queue size 6
progress 25% @chr4:111000001, elapsed 0.2s, est remaining 0.5s, peak mem 75MB, user 0.7s, sys 3.7s, output queue size 5
progress 30% @chr5:90000001, elapsed 0.2s, est remaining 0.4s, peak mem 75MB, user 0.8s, sys 4.4s, output queue size 8
progress 35% @chr6:57000001, elapsed 0.2s, est remaining 0.4s, peak mem 75MB, user 0.9s, sys 5.2s, output queue size 13
progress 40% @chr7:60000001, elapsed 0.2s, est remaining 0.4s, peak mem 75MB, user 1.0s, sys 5.9s, output queue size 16
progress 45% @chr8:61000001, elapsed 0.3s, est remaining 0.3s, peak mem 75MB, user 1.2s, sys 6.6s, output queue size 11
progress 50% @chr9:74000001, elapsed 0.3s, est remaining 0.3s, peak mem 75MB, user 1.3s, sys 7.4s, output queue size 6
progress 55% @chr10:83000001, elapsed 0.3s, est remaining 0.3s, peak mem 75MB, user 1.5s, sys 8.1s, output queue size 12
progress 60% @chr11:119000001, elapsed 0.4s, est remaining 0.2s, peak mem 75MB, user 1.6s, sys 8.8s, output queue size 4
progress 65% @chr12:130000001, elapsed 0.4s, est remaining 0.2s, peak mem 75MB, user 1.6s, sys 9.6s, output queue size 19
progress 70% @chr14:60000001, elapsed 0.4s, est remaining 0.2s, peak mem 75MB, user 1.7s, sys 10.3s, output queue size 2
progress 75% @chr16:14000001, elapsed 0.4s, est remaining 0.1s, peak mem 75MB, user 1.9s, sys 11.1s, output queue size 15
progress 80% @chr18:4000001, elapsed 0.5s, est remaining 0.1s, peak mem 75MB, user 2.1s, sys 11.8s, output queue size 10
progress 85% @chr20:22000001, elapsed 0.5s, est remaining 0.1s, peak mem 75MB, user 2.2s, sys 12.3s, output queue size 18
progress 90% @chrX:45000001, elapsed 0.6s, est remaining 0.1s, peak mem 93MB, user 2.7s, sys 12.7s, output queue size 114
progress 95% @chrY:39000001, elapsed 0.6s, est remaining 0.0s, peak mem 105MB, user 3.5s, sys 13.0s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.3s, est remaining 0.0s, peak mem 126MB, user 6.5s, sys 13.4s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 52290600
reads: 1001133
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.357 user 6.582 sys 8.256 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.000 user 0.002 sys 1.327 real
idle: 81 calls 0.022 user 0.021 sys 51.006 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 132173824 mem 6.730 user 14.031 sys 2.376 real