mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-deghu1ih because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:03:44,402 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:03:45,233 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:03:45,404 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:03:46,472 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:03:46,662 - cnv_pipe.batch.run_model - INFO - Processing cluster 624 with 170 probes
2026-06-05 14:03:47,037 - cnv_pipe.batch.run_model.cluster624 - INFO - Child process started for cluster 624 with 170 probes
2026-06-05 14:04:39,396 - cnv_pipe.batch.run_model.cluster624 - INFO - Child process finished cluster 624. Wrote cluster_624_samples.csv and cluster_624_params.csv
2026-06-05 14:04:39,397 - cnv_pipe.batch.run_model - INFO - Cluster 624 finished in 52.73 seconds. Status: SUCCESS