mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tuhxm2nd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:03:53,987 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:03:54,840 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:03:55,012 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:03:56,033 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:03:56,109 - cnv_pipe.batch.run_model - INFO - Processing cluster 762 with 178 probes
2026-06-05 14:03:56,599 - cnv_pipe.batch.run_model.cluster762 - INFO - Child process started for cluster 762 with 178 probes
2026-06-05 14:04:51,458 - cnv_pipe.batch.run_model.cluster762 - INFO - Child process finished cluster 762. Wrote cluster_762_samples.csv and cluster_762_params.csv
2026-06-05 14:04:51,460 - cnv_pipe.batch.run_model - INFO - Cluster 762 finished in 55.35 seconds. Status: SUCCESS