Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/c086aea3cc00d252955ec09fc131b8/germline_control_1.haplotyper.unfiltered.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/ccb1167dcf58f05ea530e2e79efc38/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/ccb1167dcf58f05ea530e2e79efc38/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/c086aea3cc00d252955ec09fc131b8/germline_control_1.haplotyper.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/682ccbef0f2f05308d4a0ad7dfa742/germline_control_1.forcecall.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/682ccbef0f2f05308d4a0ad7dfa742/germline_control_1.forcecall.unfiltered.vcf.gz.tbi
==> STAGING COMPLETE (6 inputs)

Checking the headers and starting positions of 2 files
Writing to /tmp/bcftools.uLErdY
Merging 1 temporary files
Done
Cleaning