File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1d/d776d4890cac52f91fc45e76497525/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-u0h0srr6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:01:58,602 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:01:59,444 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:01:59,618 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:02:00,638 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:02:00,707 - cnv_pipe.batch.run_model - INFO - Processing cluster 127 with 185 probes
2026-06-05 14:02:01,073 - cnv_pipe.batch.run_model.cluster127 - INFO - Child process started for cluster 127 with 185 probes
2026-06-05 14:02:56,565 - cnv_pipe.batch.run_model.cluster127 - INFO - Child process finished cluster 127. Wrote cluster_127_samples.csv and cluster_127_params.csv
2026-06-05 14:02:56,566 - cnv_pipe.batch.run_model - INFO - Cluster 127 finished in 55.86 seconds. Status: SUCCESS