File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/771cca54efc4dc289214273a03881b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_j7zjig0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:04:26,894 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:04:27,697 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:04:27,863 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:04:28,768 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:04:28,940 - cnv_pipe.batch.run_model - INFO - Processing cluster 1007 with 198 probes
2026-06-05 14:04:29,310 - cnv_pipe.batch.run_model.cluster1007 - INFO - Child process started for cluster 1007 with 198 probes
2026-06-05 14:05:27,461 - cnv_pipe.batch.run_model.cluster1007 - INFO - Child process finished cluster 1007. Wrote cluster_1007_samples.csv and cluster_1007_params.csv
2026-06-05 14:05:27,462 - cnv_pipe.batch.run_model - INFO - Cluster 1007 finished in 58.52 seconds. Status: SUCCESS