File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/fa58eaf6bdfa9e62c132a902bf1ad7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-v3721mep because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:05:32,984 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:05:33,835 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:05:34,004 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:05:35,014 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:05:35,197 - cnv_pipe.batch.run_model - INFO - Processing cluster 1302 with 157 probes
2026-06-05 14:05:35,580 - cnv_pipe.batch.run_model.cluster1302 - INFO - Child process started for cluster 1302 with 157 probes
2026-06-05 14:06:23,850 - cnv_pipe.batch.run_model.cluster1302 - INFO - Child process finished cluster 1302. Wrote cluster_1302_samples.csv and cluster_1302_params.csv
2026-06-05 14:06:23,850 - cnv_pipe.batch.run_model - INFO - Cluster 1302 finished in 48.65 seconds. Status: SUCCESS