cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:154000001, elapsed 0.0s, est remaining 0.6s, peak mem 111MB, user 0.2s, sys 0.5s, output queue size 12
progress 10% @chr2:70000001, elapsed 0.1s, est remaining 0.5s, peak mem 111MB, user 0.3s, sys 1.1s, output queue size 5
progress 15% @chr3:1, elapsed 0.1s, est remaining 0.5s, peak mem 111MB, user 0.4s, sys 1.8s, output queue size 15
progress 20% @chr3:136000001, elapsed 0.1s, est remaining 0.4s, peak mem 111MB, user 0.5s, sys 2.6s, output queue size 17
progress 25% @chr4:110000001, elapsed 0.1s, est remaining 0.4s, peak mem 111MB, user 0.6s, sys 3.2s, output queue size 9
progress 30% @chr5:100000001, elapsed 0.2s, est remaining 0.4s, peak mem 111MB, user 0.9s, sys 3.7s, output queue size 9
progress 35% @chr6:56000001, elapsed 0.2s, est remaining 0.4s, peak mem 111MB, user 1.0s, sys 4.5s, output queue size 14
progress 40% @chr7:45000001, elapsed 0.2s, est remaining 0.3s, peak mem 111MB, user 1.2s, sys 5.2s, output queue size 10
progress 45% @chr8:48000001, elapsed 0.2s, est remaining 0.3s, peak mem 111MB, user 1.4s, sys 5.8s, output queue size 10
progress 50% @chr9:59000001, elapsed 0.3s, est remaining 0.3s, peak mem 111MB, user 1.5s, sys 6.5s, output queue size 14
progress 55% @chr10:96000001, elapsed 0.3s, est remaining 0.2s, peak mem 111MB, user 1.6s, sys 7.3s, output queue size 6
progress 60% @chr11:127000001, elapsed 0.3s, est remaining 0.2s, peak mem 111MB, user 1.8s, sys 7.9s, output queue size 37
progress 65% @chr13:6000001, elapsed 0.4s, est remaining 0.2s, peak mem 111MB, user 2.0s, sys 8.4s, output queue size 9
progress 70% @chr14:67000001, elapsed 0.4s, est remaining 0.2s, peak mem 111MB, user 2.2s, sys 9.1s, output queue size 28
progress 75% @chr16:22000001, elapsed 0.4s, est remaining 0.1s, peak mem 111MB, user 2.3s, sys 9.8s, output queue size 10
progress 80% @chr17:74000001, elapsed 0.4s, est remaining 0.1s, peak mem 111MB, user 2.6s, sys 10.3s, output queue size 22
progress 85% @chr20:32000001, elapsed 0.5s, est remaining 0.1s, peak mem 111MB, user 2.7s, sys 11.0s, output queue size 10
progress 90% @chr21:26000001, elapsed 0.5s, est remaining 0.1s, peak mem 132MB, user 3.1s, sys 11.5s, output queue size 114
progress 95% @chrY:39000001, elapsed 0.5s, est remaining 0.0s, peak mem 150MB, user 3.5s, sys 11.9s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.9s, est remaining 0.0s, peak mem 162MB, user 5.3s, sys 12.8s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395349
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.361 user 5.876 sys 8.160 real
done: 1 calls 0.002 user 0.000 sys 0.011 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.003 user 0.002 sys 0.864 real
idle: 73 calls 0.013 user 0.004 sys 38.622 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 169918464 mem 5.803 user 13.419 sys 2.300 real