File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/4ed874529c4b4a9ca871672c930a2c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hi9oev19 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:04:10,400 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:04:11,334 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:04:11,510 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:04:12,597 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:04:12,664 - cnv_pipe.batch.run_model - INFO - Processing cluster 907 with 154 probes
2026-06-05 14:04:13,077 - cnv_pipe.batch.run_model.cluster907 - INFO - Child process started for cluster 907 with 154 probes
2026-06-05 14:05:01,692 - cnv_pipe.batch.run_model.cluster907 - INFO - Child process finished cluster 907. Wrote cluster_907_samples.csv and cluster_907_params.csv
2026-06-05 14:05:01,693 - cnv_pipe.batch.run_model - INFO - Cluster 907 finished in 49.03 seconds. Status: SUCCESS