File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/08f0db6b5c02c2c64428cdad49d1c4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ki99wpw5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:05:26,044 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:05:26,934 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:05:27,106 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:05:28,112 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:05:28,271 - cnv_pipe.batch.run_model - INFO - Processing cluster 1204 with 183 probes
2026-06-05 14:05:28,661 - cnv_pipe.batch.run_model.cluster1204 - INFO - Child process started for cluster 1204 with 183 probes
2026-06-05 14:06:25,186 - cnv_pipe.batch.run_model.cluster1204 - INFO - Child process finished cluster 1204. Wrote cluster_1204_samples.csv and cluster_1204_params.csv
2026-06-05 14:06:25,186 - cnv_pipe.batch.run_model - INFO - Cluster 1204 finished in 56.92 seconds. Status: SUCCESS