cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo AlignmentStat HCC1395_BL.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo HCC1395_BL.sentieon.insert_size_metrics --algo QualDistribution HCC1395_BL.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle HCC1395_BL.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle HCC1395_BL.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:165000001, elapsed 0.0s, est remaining 0.5s, peak mem 81MB, user 0.0s, sys 0.4s, output queue size 18
progress 10% @chr2:74000001, elapsed 0.0s, est remaining 0.4s, peak mem 81MB, user 0.1s, sys 1.1s, output queue size 14
progress 15% @chr2:235000001, elapsed 0.1s, est remaining 0.4s, peak mem 81MB, user 0.2s, sys 1.7s, output queue size 20
progress 20% @chr3:154000001, elapsed 0.1s, est remaining 0.4s, peak mem 81MB, user 0.2s, sys 2.2s, output queue size 22
progress 25% @chr4:93000001, elapsed 0.1s, est remaining 0.3s, peak mem 81MB, user 0.3s, sys 2.7s, output queue size 22
progress 30% @chr5:86000001, elapsed 0.1s, est remaining 0.3s, peak mem 81MB, user 0.3s, sys 3.3s, output queue size 24
progress 35% @chr6:66000001, elapsed 0.2s, est remaining 0.3s, peak mem 81MB, user 0.4s, sys 3.9s, output queue size 5
progress 40% @chr7:56000001, elapsed 0.2s, est remaining 0.3s, peak mem 81MB, user 0.4s, sys 4.5s, output queue size 15
progress 45% @chr8:56000001, elapsed 0.2s, est remaining 0.2s, peak mem 81MB, user 0.5s, sys 5.2s, output queue size 9
progress 50% @chr9:73000001, elapsed 0.2s, est remaining 0.2s, peak mem 81MB, user 0.6s, sys 5.8s, output queue size 15
progress 55% @chr10:95000001, elapsed 0.2s, est remaining 0.2s, peak mem 81MB, user 0.7s, sys 6.3s, output queue size 24
progress 60% @chr11:122000001, elapsed 0.3s, est remaining 0.2s, peak mem 81MB, user 0.7s, sys 6.9s, output queue size 7
progress 65% @chr13:15000001, elapsed 0.3s, est remaining 0.2s, peak mem 81MB, user 0.8s, sys 7.5s, output queue size 17
progress 70% @chr14:60000001, elapsed 0.3s, est remaining 0.1s, peak mem 81MB, user 0.8s, sys 8.0s, output queue size 1
progress 75% @chr16:12000001, elapsed 0.3s, est remaining 0.1s, peak mem 81MB, user 0.9s, sys 8.6s, output queue size 7
progress 80% @chr17:82000001, elapsed 0.3s, est remaining 0.1s, peak mem 81MB, user 0.9s, sys 9.3s, output queue size 3
progress 85% @chr20:22000001, elapsed 0.4s, est remaining 0.1s, peak mem 81MB, user 1.0s, sys 9.9s, output queue size 10
progress 90% @chrX:44000001, elapsed 0.4s, est remaining 0.0s, peak mem 96MB, user 1.4s, sys 10.0s, output queue size 114
progress 95% @chrY:39000001, elapsed 0.5s, est remaining 0.0s, peak mem 111MB, user 2.1s, sys 10.3s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.2s, est remaining 0.0s, peak mem 135MB, user 5.1s, sys 10.8s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 51395349
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 0.995 user 5.459 sys 6.915 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.002 user 0.003 sys 1.190 real
idle: 80 calls 0.028 user 0.048 sys 50.738 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 141713408 mem 5.293 user 11.439 sys 2.239 real