control_type,sample_id,variant_type,qc_metric_name,qc_value
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy,false
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy_chromosomes,NONE
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_del_dup_pass_ratio,5.2000
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_del_pass_count,52
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_dup_pass_count,10
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_missed,NONE
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_recovered_count,2
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_truth_total,2
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_qc_failed,false
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_cn,0
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_filter,PASS
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_cn,1
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_filter,PASS
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,hla,germline_control_hla_alleles_recovered_count,6
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,hla,germline_control_hla_alleles_truth_total,6
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_missed_variants,NONE
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_recovered_count,12
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_truth_total,12
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_indel_count,1369
germline,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_snv_count,25673
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy,false
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy_chromosomes,NONE
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_del_dup_pass_ratio,4.4167
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_del_pass_count,53
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_dup_pass_count,12
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_missed,NONE
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_recovered_count,2
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_truth_total,2
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_qc_failed,false
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_cn,0
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_filter,PASS
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_cn,1
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_filter,PASS
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,hla,germline_control_hla_alleles_recovered_count,6
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,hla,germline_control_hla_alleles_truth_total,6
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_missed_variants,NONE
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_recovered_count,12
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_truth_total,12
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_indel_count,1365
germline,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_snv_count,25704
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy,false
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy_chromosomes,NONE
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_del_dup_pass_ratio,5.5556
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_del_pass_count,50
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_dup_pass_count,9
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_missed,NONE
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_recovered_count,2
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_truth_total,2
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_qc_failed,false
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_cn,0
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_filter,PASS
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_cn,1
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_filter,PASS
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,hla,germline_control_hla_alleles_recovered_count,6
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,hla,germline_control_hla_alleles_truth_total,6
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_missed_variants,NONE
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_recovered_count,12
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_truth_total,12
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_indel_count,1366
germline,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_snv_count,25633
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy,false
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_abnormal_ploidy_chromosomes,NONE
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_del_dup_pass_ratio,5.3333
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_del_pass_count,48
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_dup_pass_count,9
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_missed,NONE
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_recovered_count,2
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_landmark_del_truth_total,2
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_qc_failed,false
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_cn,0
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b17_del_filter,PASS
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_cn,1
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,germline_control_cnv_ugt2b28_del_filter,PASS
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,hla,germline_control_hla_alleles_recovered_count,6
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,hla,germline_control_hla_alleles_truth_total,6
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_missed_variants,NONE
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_recovered_count,12
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_giab_truth_total,12
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_indel_count,1347
germline,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,germline_control_snv_indel_snv_count,25652
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,negative_somatic_control_cnv_segment_count,3
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_lci,0.02622210296849425
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_max_msi_score,0.041221123188734055
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_mean_msi_score,0.030888851545751096
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_min_msi_score,0.019855141639709473
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_msi_status,MSS
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_uci,0.03555560012300794
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,negative_somatic_control_msi_total_sites,178
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_pct,23.03
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_sites,41
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_indel_count,5
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_snv_count,1
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_effective_coding_region_size,34.15
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_non_synonymous_count,0
negative_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_score,0.0
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,negative_somatic_control_cnv_segment_count,5
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_lci,0.024533608174867834
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_max_msi_score,0.04560926556587219
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_mean_msi_score,0.03030748274177313
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_min_msi_score,0.019481247290968895
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_msi_status,MSS
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_uci,0.036081357308678425
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,negative_somatic_control_msi_total_sites,178
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_pct,22.47
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_sites,40
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_indel_count,2
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_snv_count,0
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_effective_coding_region_size,34.15
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_non_synonymous_count,0
negative_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_score,0.0
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,negative_somatic_control_cnv_segment_count,7
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_lci,0.025747463799561318
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_max_msi_score,0.07450731098651886
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_mean_msi_score,0.03817997947335243
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_min_msi_score,0.01320294477045536
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_msi_status,MSS
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_uci,0.05061249514714354
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,negative_somatic_control_msi_total_sites,177
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_pct,14.12
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_sites,25
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_indel_count,3
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_snv_count,2
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_effective_coding_region_size,34.15
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_non_synonymous_count,0
negative_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_score,0.0
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,negative_somatic_control_cnv_segment_count,14
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_lci,0.05632864295722269
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_max_msi_score,0.10977954417467117
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_mean_msi_score,0.07018488310277463
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_min_msi_score,0.04696954786777496
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_msi_status,MSS
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,negative_somatic_control_mimsi_uci,0.08404112324832656
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,negative_somatic_control_msi_total_sites,178
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_pct,20.22
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,negative_somatic_control_msi_unstable_sites,36
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_indel_count,8
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,negative_somatic_control_snv_indel_snv_count,2
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_effective_coding_region_size,34.15
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_non_synonymous_count,0
negative_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,negative_somatic_control_tmb_score,0.0
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_missed,MYCN;MET
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_copy_numbers,NONE
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_truth_total,2
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_segment_count,3
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_lci,0.026449470154683713
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_max_msi_score,0.046199601143598557
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_mean_msi_score,0.03298479374498129
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_min_msi_score,0.018430830910801888
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_msi_status,MSS
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_uci,0.03952011733527887
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,positive_somatic_control_msi_total_sites,178
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_pct,23.03
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_sites,41
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_missed_variants,163343;177678;13983;376002;13655
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_truth_total,5
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_indel_count,5
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_snv_count,1
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_effective_coding_region_size,34.15
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_non_synonymous_count,0
positive_somatic,NA12878_c_0002_gDNA_0001_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_score,0.0
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_missed,MYCN;MET
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_copy_numbers,NONE
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_truth_total,2
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_segment_count,5
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_lci,0.01950270306487239
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_max_msi_score,0.05042268708348274
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_mean_msi_score,0.027736567240208388
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_min_msi_score,0.014864913187921047
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_msi_status,MSS
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_uci,0.03597043141554439
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,positive_somatic_control_msi_total_sites,178
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_pct,22.47
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_sites,40
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_missed_variants,13983;376002;13655;163343;177678
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_truth_total,5
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_indel_count,2
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_snv_count,0
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_effective_coding_region_size,34.15
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_non_synonymous_count,0
positive_somatic,NA12878_c_0002_gDNA_0002_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_score,0.0
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_missed,MYCN;MET
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_copy_numbers,NONE
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_truth_total,2
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_segment_count,7
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_lci,0.03246478471634626
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_max_msi_score,0.07176382094621658
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_mean_msi_score,0.043101522140204906
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_min_msi_score,0.021567203104496002
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_msi_status,MSS
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_uci,0.053738259564063556
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,positive_somatic_control_msi_total_sites,177
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_pct,14.12
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_sites,25
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_missed_variants,13655;13983;163343;177678;376002
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_truth_total,5
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_indel_count,3
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_snv_count,2
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_effective_coding_region_size,34.15
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_non_synonymous_count,0
positive_somatic,NA12878_c_0002_gDNA_0003_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_score,0.0
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_missed,MYCN;MET
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_copy_numbers,NONE
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_amp_truth_total,2
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,cnv,positive_somatic_control_cnv_segment_count,14
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_lci,0.05044051533901929
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_max_msi_score,0.10746132582426071
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_mean_msi_score,0.06808366477489472
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_min_msi_score,0.02963821217417717
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_msi_status,MSS
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,mimsi,positive_somatic_control_mimsi_uci,0.08572681421077015
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,positive_somatic_control_msi_total_sites,178
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_pct,20.22
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,msi,positive_somatic_control_msi_unstable_sites,36
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_missed_variants,13655;13983;376002;163343;177678
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_recovered_count,0
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_coa_truth_total,5
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_indel_count,8
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,snv_indel,positive_somatic_control_snv_indel_snv_count,2
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_effective_coding_region_size,34.15
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_non_synonymous_count,0
positive_somatic,NA12878_c_0002_gDNA_0004_B23KGCJLT4_1,tmb,positive_somatic_control_tmb_score,0.0