cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_BGBW-N1-BDNA-1_B23KGCJLT4_1.md.bam --algo AlignmentStat 1029_BGBW-N1-BDNA-1_B23KGCJLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1029_BGBW-N1-BDNA-1_B23KGCJLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1029_BGBW-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1029_BGBW-N1-BDNA-1_B23KGCJLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1029_BGBW-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:181000001, elapsed 2.0s, est remaining 38.3s, peak mem 871MB, user 47.1s, sys 0.6s, output queue size 146
progress 10% @chr2:46000001, elapsed 3.6s, est remaining 32.5s, peak mem 1222MB, user 98.7s, sys 1.0s, output queue size 166
progress 15% @chr2:237000001, elapsed 5.5s, est remaining 31.0s, peak mem 1484MB, user 155.2s, sys 1.7s, output queue size 122
progress 20% @chr3:178000001, elapsed 7.0s, est remaining 28.1s, peak mem 1502MB, user 202.5s, sys 2.1s, output queue size 174
progress 25% @chr4:129000001, elapsed 8.4s, est remaining 25.2s, peak mem 1517MB, user 246.7s, sys 2.3s, output queue size 302
progress 30% @chr5:106000001, elapsed 9.5s, est remaining 22.1s, peak mem 1560MB, user 280.2s, sys 2.5s, output queue size 464
progress 35% @chr6:91000001, elapsed 11.0s, est remaining 20.5s, peak mem 1591MB, user 320.7s, sys 2.8s, output queue size 625
progress 40% @chr7:65000001, elapsed 12.8s, est remaining 19.2s, peak mem 1709MB, user 370.9s, sys 3.0s, output queue size 786
progress 45% @chr8:82000001, elapsed 14.8s, est remaining 18.1s, peak mem 1741MB, user 436.8s, sys 3.3s, output queue size 204
progress 50% @chr8:143000001, elapsed 16.4s, est remaining 16.4s, peak mem 1773MB, user 478.8s, sys 3.5s, output queue size 366
progress 55% @chr10:118000001, elapsed 18.3s, est remaining 15.0s, peak mem 1814MB, user 538.5s, sys 3.8s, output queue size 527
progress 60% @chr11:1000001, elapsed 20.4s, est remaining 13.6s, peak mem 1819MB, user 605.2s, sys 4.1s, output queue size 510
progress 65% @chr13:33000001, elapsed 22.3s, est remaining 12.0s, peak mem 1825MB, user 656.1s, sys 4.3s, output queue size 672
progress 70% @chr14:71000001, elapsed 23.5s, est remaining 10.1s, peak mem 1825MB, user 692.1s, sys 4.5s, output queue size 833
progress 75% @chr16:41000001, elapsed 25.7s, est remaining 8.6s, peak mem 1851MB, user 759.6s, sys 4.9s, output queue size 995
progress 80% @chr18:9000001, elapsed 28.9s, est remaining 7.2s, peak mem 1863MB, user 854.5s, sys 5.3s, output queue size 623
progress 85% @chr20:9000001, elapsed 31.8s, est remaining 5.6s, peak mem 1863MB, user 955.4s, sys 5.6s, output queue size 351
progress 90% @chrX:36000001, elapsed 33.5s, est remaining 3.7s, peak mem 1863MB, user 1009.6s, sys 5.9s, output queue size 513
progress 95% @chrY:55000001, elapsed 34.5s, est remaining 1.8s, peak mem 1868MB, user 1037.0s, sys 6.0s, output queue size 675
progress 100% @chr22:23000001, elapsed 38.9s, est remaining 0.0s, peak mem 1906MB, user 1084.0s, sys 6.3s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 13269943922
reads: 271283048
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 214.989 user 4.702 sys 219.423 real
done: 1 calls 0.001 user 0.000 sys 0.010 real
exec_no_coor: 1 calls 0.001 user 0.000 sys 0.002 real
execute: 1 calls 0.001 user 0.001 sys 38.978 real
idle: 182 calls 0.129 user 0.000 sys 146.387 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 1998680064 mem 1085.450 user 6.698 sys 40.047 real