cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_BF84-N1-BDNA-1_B23KGCJLT4_1.md.bam --algo AlignmentStat 1029_BF84-N1-BDNA-1_B23KGCJLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1029_BF84-N1-BDNA-1_B23KGCJLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1029_BF84-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1029_BF84-N1-BDNA-1_B23KGCJLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1029_BF84-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:187000001, elapsed 2.3s, est remaining 42.8s, peak mem 1024MB, user 52.4s, sys 0.7s, output queue size 146
progress 10% @chr2:17000001, elapsed 4.1s, est remaining 36.9s, peak mem 1342MB, user 113.5s, sys 1.2s, output queue size 117
progress 15% @chr3:18000001, elapsed 6.2s, est remaining 35.1s, peak mem 2036MB, user 173.2s, sys 1.8s, output queue size 203
progress 20% @chr3:178000001, elapsed 8.0s, est remaining 32.0s, peak mem 2061MB, user 230.4s, sys 2.5s, output queue size 174
progress 25% @chr4:133000001, elapsed 9.6s, est remaining 28.7s, peak mem 2090MB, user 280.0s, sys 2.9s, output queue size 302
progress 30% @chr5:106000001, elapsed 10.8s, est remaining 25.2s, peak mem 2122MB, user 317.6s, sys 3.1s, output queue size 464
progress 35% @chr6:91000001, elapsed 12.6s, est remaining 23.4s, peak mem 2139MB, user 365.6s, sys 3.5s, output queue size 625
progress 40% @chr7:47000001, elapsed 14.6s, est remaining 21.8s, peak mem 2235MB, user 422.3s, sys 4.0s, output queue size 786
progress 45% @chr8:72000001, elapsed 16.9s, est remaining 20.6s, peak mem 2240MB, user 500.0s, sys 4.4s, output queue size 204
progress 50% @chr8:143000001, elapsed 18.7s, est remaining 18.7s, peak mem 2308MB, user 543.9s, sys 4.8s, output queue size 366
progress 55% @chr10:118000001, elapsed 21.1s, est remaining 17.3s, peak mem 2338MB, user 619.1s, sys 5.3s, output queue size 527
progress 60% @chr12:1000001, elapsed 23.7s, est remaining 15.8s, peak mem 2338MB, user 702.5s, sys 6.0s, output queue size 510
progress 65% @chr12:111000001, elapsed 26.3s, est remaining 14.2s, peak mem 2355MB, user 773.1s, sys 6.8s, output queue size 672
progress 70% @chr13:102000001, elapsed 27.6s, est remaining 11.8s, peak mem 2363MB, user 809.0s, sys 7.1s, output queue size 833
progress 75% @chr16:42000001, elapsed 30.1s, est remaining 10.0s, peak mem 2394MB, user 885.2s, sys 7.6s, output queue size 995
progress 80% @chr18:10000001, elapsed 33.8s, est remaining 8.5s, peak mem 2406MB, user 991.4s, sys 8.0s, output queue size 623
progress 85% @chr20:23000001, elapsed 37.1s, est remaining 6.5s, peak mem 2406MB, user 1112.1s, sys 8.6s, output queue size 351
progress 90% @chr21:44000001, elapsed 39.1s, est remaining 4.3s, peak mem 2444MB, user 1178.8s, sys 8.8s, output queue size 513
progress 95% @chrY:53000001, elapsed 40.7s, est remaining 2.1s, peak mem 2446MB, user 1215.3s, sys 9.0s, output queue size 675
progress 100% @chrX:67000001, elapsed 45.4s, est remaining 0.0s, peak mem 2505MB, user 1285.3s, sys 9.4s, output queue size 3540
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 15779590337
reads: 318152412
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 262.405 user 6.264 sys 265.903 real
done: 1 calls 0.005 user 0.000 sys 0.015 real
exec_no_coor: 1 calls 0.001 user 0.000 sys 0.003 real
execute: 1 calls 0.003 user 0.004 sys 45.509 real
idle: 180 calls 0.175 user 0.001 sys 145.908 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 2626711552 mem 1286.987 user 9.705 sys 46.656 real