cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_16G-N1-BDNA-1_B23KGCJLT4_1.md.bam --algo AlignmentStat 1029_16G-N1-BDNA-1_B23KGCJLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1029_16G-N1-BDNA-1_B23KGCJLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1029_16G-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1029_16G-N1-BDNA-1_B23KGCJLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1029_16G-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:154000001, elapsed 3.0s, est remaining 57.3s, peak mem 1130MB, user 70.7s, sys 0.8s, output queue size 146
progress 10% @chr2:70000001, elapsed 5.5s, est remaining 49.7s, peak mem 1686MB, user 149.1s, sys 1.8s, output queue size 117
progress 15% @chr3:4000001, elapsed 8.2s, est remaining 46.5s, peak mem 2069MB, user 232.8s, sys 3.0s, output queue size 122
progress 20% @chr3:178000001, elapsed 10.5s, est remaining 42.0s, peak mem 2108MB, user 302.8s, sys 3.3s, output queue size 174
progress 25% @chr4:87000001, elapsed 12.5s, est remaining 37.6s, peak mem 2144MB, user 367.6s, sys 3.7s, output queue size 302
progress 30% @chr5:35000001, elapsed 14.2s, est remaining 33.0s, peak mem 2208MB, user 415.8s, sys 4.1s, output queue size 464
progress 35% @chr6:56000001, elapsed 16.5s, est remaining 30.7s, peak mem 2252MB, user 474.7s, sys 4.4s, output queue size 625
progress 40% @chr7:47000001, elapsed 19.2s, est remaining 28.7s, peak mem 2357MB, user 556.0s, sys 4.7s, output queue size 786
progress 45% @chr8:79000001, elapsed 22.2s, est remaining 27.1s, peak mem 2377MB, user 655.0s, sys 5.3s, output queue size 204
progress 50% @chr9:39000001, elapsed 24.7s, est remaining 24.7s, peak mem 2461MB, user 718.0s, sys 5.5s, output queue size 366
progress 55% @chr10:73000001, elapsed 27.7s, est remaining 22.6s, peak mem 2497MB, user 809.8s, sys 5.9s, output queue size 527
progress 60% @chr12:1000001, elapsed 30.8s, est remaining 20.5s, peak mem 2497MB, user 915.6s, sys 6.3s, output queue size 510
progress 65% @chr13:18000001, elapsed 33.8s, est remaining 18.2s, peak mem 2498MB, user 997.0s, sys 6.5s, output queue size 672
progress 70% @chr14:69000001, elapsed 35.6s, est remaining 15.3s, peak mem 2507MB, user 1044.3s, sys 6.9s, output queue size 833
progress 75% @chr16:38000001, elapsed 39.0s, est remaining 13.0s, peak mem 2545MB, user 1149.1s, sys 7.2s, output queue size 995
progress 80% @chr18:10000001, elapsed 44.1s, est remaining 11.0s, peak mem 2594MB, user 1301.0s, sys 7.7s, output queue size 623
progress 85% @chr19:45000001, elapsed 48.7s, est remaining 8.6s, peak mem 2594MB, user 1445.9s, sys 8.2s, output queue size 785
progress 90% @chrX:15000001, elapsed 51.3s, est remaining 5.7s, peak mem 2594MB, user 1547.3s, sys 8.5s, output queue size 513
progress 95% @chrY:53000001, elapsed 53.0s, est remaining 2.8s, peak mem 2594MB, user 1588.2s, sys 8.7s, output queue size 675
progress 100% @chr22:23000001, elapsed 59.9s, est remaining 0.0s, peak mem 2597MB, user 1666.1s, sys 9.2s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 19411960612
reads: 403138416
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 316.335 user 6.593 sys 323.058 real
done: 1 calls 0.009 user 0.000 sys 0.017 real
exec_no_coor: 1 calls 0.007 user 0.000 sys 0.009 real
execute: 1 calls 0.003 user 0.003 sys 60.045 real
idle: 247 calls 0.158 user 0.000 sys 212.374 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 2723520512 mem 1667.828 user 9.489 sys 61.082 real