File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/80e521fcc2ae77d6621da24d3eab3e/.command.err
Size
3.6 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:MIMSI_ANALYZE (positive_somatic_control_1)
Attempt

Content

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[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: NA12878_c_0002_gDNA_0001_B23KGCJLT4_1.recalibrated.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai

[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
[W::hts_idx_load3] The index file is older than the data file: normal/reference-NA12878.bam.bai
/usr/local/lib/python3.11/site-packages/main/evaluate_sample.py:47: UserWarning: Sample name 'positive_somatic_control_1' has multiple '_' characters; cannot split into tumor/normal IDs. Reporting full name as tumor ID.
  warnings.warn(