mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-eqva7x83 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 23:41:04,943 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 23:41:05,719 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 23:41:05,893 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 23:41:47,461 - cnv_pipe.batch.run_model - INFO - Loaded data with 185 samples
2026-06-05 23:41:47,548 - cnv_pipe.batch.run_model - INFO - Processing cluster 0 with 137 probes
2026-06-05 23:41:47,924 - cnv_pipe.batch.run_model.cluster0 - INFO - Child process started for cluster 0 with 137 probes
2026-06-05 23:45:48,646 - cnv_pipe.batch.run_model.cluster0 - INFO - Child process finished cluster 0. Wrote cluster_0_samples.csv and cluster_0_params.csv
2026-06-05 23:45:48,648 - cnv_pipe.batch.run_model - INFO - Cluster 0 finished in 241.10 seconds. Status: SUCCESS