cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1029_BH4B-N1-BDNA-1_B23KGCJLT4_1.md.bam --algo AlignmentStat 1029_BH4B-N1-BDNA-1_B23KGCJLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1029_BH4B-N1-BDNA-1_B23KGCJLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1029_BH4B-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1029_BH4B-N1-BDNA-1_B23KGCJLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1029_BH4B-N1-BDNA-1_B23KGCJLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:187000001, elapsed 2.4s, est remaining 45.9s, peak mem 1017MB, user 55.4s, sys 0.8s, output queue size 146
progress 10% @chr1:226000001, elapsed 4.4s, est remaining 39.2s, peak mem 1384MB, user 119.8s, sys 1.5s, output queue size 117
progress 15% @chr3:18000001, elapsed 6.6s, est remaining 37.6s, peak mem 1899MB, user 184.4s, sys 2.3s, output queue size 203
progress 20% @chr3:178000001, elapsed 8.5s, est remaining 34.0s, peak mem 1899MB, user 244.7s, sys 3.1s, output queue size 174
progress 25% @chr4:129000001, elapsed 10.2s, est remaining 30.5s, peak mem 1899MB, user 297.2s, sys 3.4s, output queue size 302
progress 30% @chr5:1, elapsed 11.4s, est remaining 26.7s, peak mem 1926MB, user 338.6s, sys 3.7s, output queue size 464
progress 35% @chr6:86000001, elapsed 13.3s, est remaining 24.7s, peak mem 1955MB, user 384.8s, sys 3.9s, output queue size 625
progress 40% @chr7:65000001, elapsed 15.4s, est remaining 23.1s, peak mem 2064MB, user 446.9s, sys 4.2s, output queue size 786
progress 45% @chr8:79000001, elapsed 17.8s, est remaining 21.8s, peak mem 2120MB, user 526.0s, sys 4.5s, output queue size 204
progress 50% @chr9:42000001, elapsed 19.8s, est remaining 19.8s, peak mem 2162MB, user 576.3s, sys 4.8s, output queue size 366
progress 55% @chr10:118000001, elapsed 22.1s, est remaining 18.1s, peak mem 2191MB, user 647.7s, sys 5.0s, output queue size 527
progress 60% @chr12:1000001, elapsed 24.6s, est remaining 16.4s, peak mem 2191MB, user 728.7s, sys 5.4s, output queue size 510
progress 65% @chr12:102000001, elapsed 27.0s, est remaining 14.5s, peak mem 2206MB, user 792.4s, sys 5.7s, output queue size 672
progress 70% @chr14:69000001, elapsed 28.5s, est remaining 12.2s, peak mem 2206MB, user 834.7s, sys 5.9s, output queue size 833
progress 75% @chr16:42000001, elapsed 31.3s, est remaining 10.4s, peak mem 2256MB, user 916.5s, sys 6.2s, output queue size 995
progress 80% @chr18:25000001, elapsed 35.4s, est remaining 8.8s, peak mem 2285MB, user 1034.7s, sys 6.6s, output queue size 623
progress 85% @chr19:15000001, elapsed 38.9s, est remaining 6.9s, peak mem 2285MB, user 1166.3s, sys 7.0s, output queue size 351
progress 90% @chrX:36000001, elapsed 41.0s, est remaining 4.6s, peak mem 2309MB, user 1231.9s, sys 7.3s, output queue size 513
progress 95% @chrY:53000001, elapsed 42.1s, est remaining 2.2s, peak mem 2334MB, user 1268.3s, sys 7.5s, output queue size 675
progress 100% @chr22:23000001, elapsed 49.2s, est remaining 0.0s, peak mem 2334MB, user 1328.8s, sys 7.7s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 15882149207
reads: 328666598
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 261.000 user 5.605 sys 264.895 real
done: 1 calls 0.012 user 0.000 sys 0.014 real
exec_no_coor: 1 calls 0.000 user 0.001 sys 0.003 real
execute: 1 calls 0.003 user 0.006 sys 49.329 real
idle: 247 calls 0.115 user 0.001 sys 222.038 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 2448236544 mem 1330.637 user 7.939 sys 50.446 real