sample_id,mosdepth_mean_coverage,mosdepth_mean_coverage_target,samtools_raw_total_sequences,samtools_reads_mapped,samtools_reads_unmapped,samtools_reads_properly_paired,samtools_reads_duplicated,samtools_reads_mq0,samtools_bases_mapped_cigar,samtools_mismatches,samtools_error_rate,samtools_average_length,samtools_average_quality,samtools_insert_size_average,samtools_insert_size_std_dev,samtools_properly_paired_percent,samtools_duplication_rate,samtools_mapping_rate,sentieon_insert_size_median_insert_size,sentieon_insert_size_mean_insert_size,sentieon_hotspot_depth_mean_target_coverage,sentieon_hotspot_depth_pct_selected_bases,sentieon_hotspot_depth_zero_cvg_targets_pct,sentieon_hotspot_depth_pct_target_bases_10x,sentieon_hotspot_depth_pct_target_bases_20x,sentieon_hotspot_depth_pct_target_bases_30x,sentieon_hotspot_depth_at_dropout,sentieon_hotspot_depth_gc_dropout,sentieon_coding_depth_mean_target_coverage,sentieon_coding_depth_pct_selected_bases,sentieon_coding_depth_zero_cvg_targets_pct,sentieon_coding_depth_pct_target_bases_10x,sentieon_coding_depth_pct_target_bases_20x,sentieon_coding_depth_pct_target_bases_30x,sentieon_coding_depth_at_dropout,sentieon_coding_depth_gc_dropout,sentieon_noncoding_depth_mean_target_coverage,sentieon_noncoding_depth_pct_selected_bases,sentieon_noncoding_depth_zero_cvg_targets_pct,sentieon_noncoding_depth_pct_target_bases_10x,sentieon_noncoding_depth_pct_target_bases_20x,sentieon_noncoding_depth_pct_target_bases_30x,sentieon_noncoding_depth_at_dropout,sentieon_noncoding_depth_gc_dropout,sentieon_boosted_depth_mean_target_coverage,sentieon_boosted_depth_pct_selected_bases,sentieon_boosted_depth_zero_cvg_targets_pct,sentieon_boosted_depth_pct_target_bases_10x,sentieon_boosted_depth_pct_target_bases_20x,sentieon_boosted_depth_pct_target_bases_30x,sentieon_boosted_depth_at_dropout,sentieon_boosted_depth_gc_dropout,sentieon_non_boosted_depth_mean_target_coverage,sentieon_non_boosted_depth_pct_selected_bases,sentieon_non_boosted_depth_zero_cvg_targets_pct,sentieon_non_boosted_depth_pct_target_bases_10x,sentieon_non_boosted_depth_pct_target_bases_20x,sentieon_non_boosted_depth_pct_target_bases_30x,sentieon_non_boosted_depth_at_dropout,sentieon_non_boosted_depth_gc_dropout,sentieon_foresight_depth_mean_target_coverage,sentieon_foresight_depth_pct_selected_bases,sentieon_foresight_depth_zero_cvg_targets_pct,sentieon_foresight_depth_pct_target_bases_10x,sentieon_foresight_depth_pct_target_bases_20x,sentieon_foresight_depth_pct_target_bases_30x,sentieon_foresight_depth_at_dropout,sentieon_foresight_depth_gc_dropout,sentieon_all_targets_mean_target_coverage,sentieon_all_targets_pct_selected_bases,sentieon_all_targets_zero_cvg_targets_pct,sentieon_all_targets_pct_target_bases_10x,sentieon_all_targets_pct_target_bases_20x,sentieon_all_targets_pct_target_bases_30x,sentieon_all_targets_at_dropout,sentieon_all_targets_gc_dropout,sentieon_all_probes_mean_target_coverage,sentieon_all_probes_pct_selected_bases,sentieon_all_probes_zero_cvg_targets_pct,sentieon_all_probes_pct_target_bases_10x,sentieon_all_probes_pct_target_bases_20x,sentieon_all_probes_pct_target_bases_30x,sentieon_all_probes_at_dropout,sentieon_all_probes_gc_dropout,seqtool_hotspot_depth_frac_reads_on_target,seqtool_hotspot_depth_frac_pairs_on_target,seqtool_hotspot_depth_frag_size_median,seqtool_hotspot_depth_frag_size_mean,seqtool_hotspot_depth_frag_size_std,seqtool_hotspot_depth_min_depth,seqtool_hotspot_depth_mean_depth,seqtool_hotspot_depth_cv_depth,seqtool_hotspot_depth_max_depth,seqtool_hotspot_depth_q5_depth,seqtool_hotspot_depth_q50_depth,seqtool_hotspot_depth_frac_bases_gt30x,seqtool_hotspot_depth_frac_bases_gt100x,seqtool_hotspot_depth_contam,seqtool_hotspot_depth_saturation_at_1000000_reads,seqtool_coding_depth_frac_reads_on_target,seqtool_coding_depth_frac_pairs_on_target,seqtool_coding_depth_frag_size_median,seqtool_coding_depth_frag_size_mean,seqtool_coding_depth_frag_size_std,seqtool_coding_depth_min_depth,seqtool_coding_depth_mean_depth,seqtool_coding_depth_cv_depth,seqtool_coding_depth_max_depth,seqtool_coding_depth_q5_depth,seqtool_coding_depth_q50_depth,seqtool_coding_depth_frac_bases_gt30x,seqtool_coding_depth_frac_bases_gt100x,seqtool_coding_depth_contam,seqtool_coding_depth_saturation_at_1000000_reads,seqtool_coding_depth_gc_bias_mae,seqtool_coding_depth_gc_bias_low,seqtool_coding_depth_gc_bias_high,seqtool_coding_depth_gc_bias_ratio,seqtool_noncoding_depth_frac_reads_on_target,seqtool_noncoding_depth_frac_pairs_on_target,seqtool_noncoding_depth_frag_size_median,seqtool_noncoding_depth_frag_size_mean,seqtool_noncoding_depth_frag_size_std,seqtool_noncoding_depth_min_depth,seqtool_noncoding_depth_mean_depth,seqtool_noncoding_depth_cv_depth,seqtool_noncoding_depth_max_depth,seqtool_noncoding_depth_q5_depth,seqtool_noncoding_depth_q50_depth,seqtool_noncoding_depth_frac_bases_gt30x,seqtool_noncoding_depth_frac_bases_gt100x,seqtool_noncoding_depth_contam,seqtool_noncoding_depth_saturation_at_1000000_reads,seqtool_noncoding_depth_gc_bias_mae,seqtool_noncoding_depth_gc_bias_low,seqtool_noncoding_depth_gc_bias_high,seqtool_noncoding_depth_gc_bias_ratio,seqtool_boosted_depth_frac_reads_on_target,seqtool_boosted_depth_frac_pairs_on_target,seqtool_boosted_depth_frag_size_median,seqtool_boosted_depth_frag_size_mean,seqtool_boosted_depth_frag_size_std,seqtool_boosted_depth_min_depth,seqtool_boosted_depth_mean_depth,seqtool_boosted_depth_cv_depth,seqtool_boosted_depth_max_depth,seqtool_boosted_depth_q5_depth,seqtool_boosted_depth_q50_depth,seqtool_boosted_depth_frac_bases_gt30x,seqtool_boosted_depth_frac_bases_gt100x,seqtool_boosted_depth_contam,seqtool_boosted_depth_saturation_at_1000000_reads,seqtool_boosted_depth_gc_bias_mae,seqtool_boosted_depth_gc_bias_low,seqtool_boosted_depth_gc_bias_high,seqtool_boosted_depth_gc_bias_ratio,seqtool_non_boosted_depth_frac_reads_on_target,seqtool_non_boosted_depth_frac_pairs_on_target,seqtool_non_boosted_depth_frag_size_median,seqtool_non_boosted_depth_frag_size_mean,seqtool_non_boosted_depth_frag_size_std,seqtool_non_boosted_depth_min_depth,seqtool_non_boosted_depth_mean_depth,seqtool_non_boosted_depth_cv_depth,seqtool_non_boosted_depth_max_depth,seqtool_non_boosted_depth_q5_depth,seqtool_non_boosted_depth_q50_depth,seqtool_non_boosted_depth_frac_bases_gt30x,seqtool_non_boosted_depth_frac_bases_gt100x,seqtool_non_boosted_depth_contam,seqtool_non_boosted_depth_saturation_at_1000000_reads,seqtool_non_boosted_depth_gc_bias_mae,seqtool_non_boosted_depth_gc_bias_low,seqtool_non_boosted_depth_gc_bias_high,seqtool_non_boosted_depth_gc_bias_ratio,seqtool_foresight_depth_frac_reads_on_target,seqtool_foresight_depth_frac_pairs_on_target,seqtool_foresight_depth_frag_size_median,seqtool_foresight_depth_frag_size_mean,seqtool_foresight_depth_frag_size_std,seqtool_foresight_depth_min_depth,seqtool_foresight_depth_mean_depth,seqtool_foresight_depth_cv_depth,seqtool_foresight_depth_max_depth,seqtool_foresight_depth_q5_depth,seqtool_foresight_depth_q50_depth,seqtool_foresight_depth_frac_bases_gt30x,seqtool_foresight_depth_frac_bases_gt100x,seqtool_foresight_depth_contam,seqtool_foresight_depth_saturation_at_1000000_reads,seqtool_foresight_depth_gc_bias_mae,seqtool_foresight_depth_gc_bias_low,seqtool_foresight_depth_gc_bias_high,seqtool_foresight_depth_gc_bias_ratio,seqtool_all_targets_frac_reads_on_target,seqtool_all_targets_frac_pairs_on_target,seqtool_all_targets_frag_size_median,seqtool_all_targets_frag_size_mean,seqtool_all_targets_frag_size_std,seqtool_all_targets_min_depth,seqtool_all_targets_mean_depth,seqtool_all_targets_cv_depth,seqtool_all_targets_max_depth,seqtool_all_targets_q5_depth,seqtool_all_targets_q50_depth,seqtool_all_targets_frac_bases_gt30x,seqtool_all_targets_frac_bases_gt100x,seqtool_all_targets_contam,seqtool_all_targets_saturation_at_1000000_reads,seqtool_all_targets_gc_bias_mae,seqtool_all_targets_gc_bias_low,seqtool_all_targets_gc_bias_high,seqtool_all_targets_gc_bias_ratio,seqtool_all_probes_frac_reads_on_target,seqtool_all_probes_frac_pairs_on_target,seqtool_all_probes_frag_size_median,seqtool_all_probes_frag_size_mean,seqtool_all_probes_frag_size_std,seqtool_all_probes_min_depth,seqtool_all_probes_mean_depth,seqtool_all_probes_cv_depth,seqtool_all_probes_max_depth,seqtool_all_probes_q5_depth,seqtool_all_probes_q50_depth,seqtool_all_probes_frac_bases_gt30x,seqtool_all_probes_frac_bases_gt100x,seqtool_all_probes_contam,seqtool_all_probes_saturation_at_1000000_reads,seqtool_all_probes_gc_bias_mae,seqtool_all_probes_gc_bias_low,seqtool_all_probes_gc_bias_high,seqtool_all_probes_gc_bias_ratio
1029_BCAN-T1-TDNA-1_A23MHWWLT4_1,4.89,158.3,525074166,525064481,9685,516102680,282493491,73367079,60194991899,353574250,0.005873815,115.0,39.0,122.1,46.0,98.3,0.5380068365427828,0.9999815549866531,111,120.802729,544.918,0.682338,0.0,1.0,1.0,1.0,0.0,1.6237,514.868,0.682338,0.00190759,0.997993,0.997841,0.997674,6.26599,1.16943,475.977,0.682338,0.00316486,0.99553,0.995198,0.994951,4.5634,0.318628,488.393,0.682338,0.00284922,0.996316,0.996042,0.99582,5.13819,0.255509,204.111,0.682338,0.0120862,0.977558,0.974971,0.972466,4.85233,1.81215,615.939,0.682338,0.00296736,0.995628,0.994741,0.994189,5.97645,0.937683,244.671,0.682338,0.0118,0.980226,0.977957,0.97577,3.87891,2.14671,229.88,0.682338,0.013025,0.983926,0.9819,0.979022,4.28731,1.48212,0.000118,0.000127,111.0,120.44976,35.589149,177.0,323.410959,0.212095,552.0,208.0,303.0,1.0,1.0,0.0123,653725.0,0.050187,0.05181,111.0,120.44976,35.589149,0.0,318.419455,0.324477,1657.0,143.0,294.0,0.999917,0.992694,0.0123,653725.0,0.22408236363636364,0.69509,1.2065925,0.8478284675331258,0.084173,0.08615,111.0,120.44976,35.589149,0.0,294.242356,0.348164,3834.0,130.0,265.0,0.99913,0.983825,0.0123,653725.0,0.2859666363636364,0.9785494,0.8323345,1.2642493593615536,0.120471,0.123021,111.0,120.44976,35.589149,0.0,301.965691,0.341147,3834.0,134.0,275.0,0.999382,0.986658,0.0123,653725.0,0.16787763636363637,0.8976868,1.0130148333333333,1.3473734327884463,0.404489,0.41663,111.0,120.44976,35.589149,0.0,130.022104,0.352116,5149.0,49.0,117.0,0.987843,0.638315,0.0123,653725.0,0.08057981818181817,1.0617434,0.9307525,1.2539434695043863,0.019005,0.019387,111.0,120.44976,35.589149,0.0,389.533669,0.356302,1583.0,147.0,358.0,0.998116,0.985065,0.0123,653725.0,0.3419478181818182,0.5731338,1.3804833333333333,0.5954516994633274,0.518405,0.531983,111.0,120.44976,35.589149,0.0,154.689268,0.395899,5149.0,51.0,128.0,0.989488,0.687847,0.0123,653725.0,0.12106681818181815,1.1476628,0.9242271666666667,1.4537439989044527,0.52457,0.535323,111.0,120.44976,35.589149,0.0,144.926095,0.373103,5149.0,45.0,120.0,0.986404,0.633508,0.0123,653725.0,0.1630480909090909,1.2254232,0.8650595,1.4739256115207684
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NTC_0002_0015_A23MHWWLT4_1,0.0,0.0,41412,41390,22,1688,38714,5958,4651141,96748,0.02080092,150.0,32.1,158.9,42.2,4.1,0.9348498019897614,0.9994687530184487,194,218.636646,0.0,0.0346071,1.0,0.0,0.0,0.0,0.0,0.0,0.00214637,0.0346071,0.997351,0.0,0.0,0.0,26.3409,24.1833,0.00104853,0.0346071,0.997794,0.0,0.0,0.0,46.2001,19.4474,0.00139902,0.0346071,0.997151,0.0,0.0,0.0,36.2132,15.9992,0.000649154,0.0346071,0.999178,0.0,0.0,0.0,14.6795,6.71263,0.00200334,0.0346071,0.995549,0.0,0.0,0.0,40.1278,37.2678,0.000751115,0.0346071,0.999039,0.0,0.0,0.0,15.2081,7.6835,0.000673562,0.0346071,0.999103,0.0,0.0,0.0,16.747,5.66716,0.0,0.0,194.0,218.636646,92.642906,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.5,1.0,0.016308,0.080745,194.0,218.636646,92.642906,0.0,0.001763,2.006729,1.0,0.0,0.0,0.0,0.0,0.5,1.0,1.1818348181818181,0.073224,1.822193333333333,0.0,0.014826,0.074534,194.0,218.636646,92.642906,0.0,0.000874,2.057738,1.0,0.0,0.0,0.0,0.0,0.5,1.0,0.9350919999999999,0.8939444,0.4394051666666667,2.2746443052152268,0.026686,0.124224,194.0,218.636646,92.642906,0.0,0.001158,1.905063,1.0,0.0,0.0,0.0,0.0,0.5,1.0,0.5720819090909091,0.3681778,1.0741793333333334,0.16664984064997374,0.112676,0.524845,194.0,218.636646,92.642906,0.0,0.000531,1.502901,1.0,0.0,0.0,0.0,0.0,0.5,1.0,0.4401603636363637,0.30713239999999997,1.1526195,0.9509630670265075,0.00556,0.024845,194.0,218.636646,92.642906,0.0,0.001505,1.983973,1.0,0.0,0.0,0.0,0.0,0.5,1.0,1.2889728181818183,0.0,1.698408,0.0,0.137139,0.630435,194.0,218.636646,92.642906,0.0,0.000617,1.365697,1.0,0.0,0.0,0.0,0.0,0.5,1.0,0.42004763636363635,0.3653616,1.016162,0.9303173386731272,0.139362,0.630435,194.0,218.636646,92.642906,0.0,0.000548,1.336439,1.0,0.0,0.0,0.0,0.0,0.5,1.0,0.48626781818181813,0.42755660000000006,0.8487581666666667,0.584769457407327