File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/34a90b4f9cf1d7e0fdcf80cfc21be8/.command.err
Size
68.3 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr10_74133927-74134264.bed)
Attempt

Content

View in new tab 
[2026-06-06T01:01:44.423757Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-06T01:01:44.425231Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-06T01:01:44.425239Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-06T01:01:44.425244Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-06T01:01:44.425250Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXVUqSVb'
[2026-06-06T01:01:44.425255Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-06T01:01:44.425260Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-06T01:01:44.425264Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-06T01:01:44.425267Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-06T01:01:44.425271Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-06T01:01:44.425275Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-06T01:01:44.425279Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-06T01:01:44.425282Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-06T01:01:44.425286Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-06T01:01:44.425945Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-06T01:01:44.426086Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-06T01:01:44.431995Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-06T01:01:44.432600Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-06T01:01:44.432894Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-06T01:01:44.433219Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-06T01:01:44.433487Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.434165Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.434253Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.434324Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.434439Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.434502Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.434680Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.434982Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.435089Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.435309Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.435390Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.435507Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.435568Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.435694Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.436054Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.437476Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.438104Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.438158Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-06T01:01:44.438539Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.438921Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.439272Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.439345Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.439460Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.439528Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.439637Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.439699Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.439817Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.439882Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.439991Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.440054Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.440179Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.440274Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.440583Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.440862Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.440972Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.441036Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.441143Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.441205Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.441316Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.441376Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.441487Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.441555Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.441692Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.441758Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.441928Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.442097Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.442574Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.443084Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.443227Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.443298Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.443410Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.443478Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.443587Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.443653Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.443761Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.443824Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.443932Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.444002Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.444360Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.444769Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.444884Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.444945Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.445056Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.445120Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.445226Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.445294Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.445401Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.445463Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.445569Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.445634Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.445753Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.445927Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.446495Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.446559Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.463411Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.463833Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.464038Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.464181Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.464904Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.465046Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.465134Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.465276Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.465548Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.465741Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.466237Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.466469Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.467087Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.467554Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-06T01:01:44.468148Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.468390Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-06T01:01:44.468913Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.469890Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.472127Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.472701Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-06T01:01:44.479393Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-06T01:01:44.480154Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0010] Task initiated on local node
[2026-06-06T01:01:44.482953Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0003] Task initiated on local node
[2026-06-06T01:01:44.485616Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0001] Task initiated on local node
[2026-06-06T01:01:44.487653Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0010] Task initiated on local node
[2026-06-06T01:01:44.489177Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0011] Task initiated on local node
[2026-06-06T01:01:44.489638Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0006] Task initiated on local node
[2026-06-06T01:01:44.553138Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.553783Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:01:44.556984Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-06T01:01:52.675677Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:01:52.676580Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:01:52.679431Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0009] Task initiated on local node
[2026-06-06T01:02:12.503430Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:12.504789Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:02:12.507676Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-06T01:02:12.568836Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:12.569555Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:02:12.572100Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0007] Task initiated on local node
[2026-06-06T01:02:18.486268Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:18.487038Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:02:18.490019Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-06T01:02:29.504453Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:29.505622Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:02:29.508621Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-06T01:02:38.830160Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:38.831353Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:02:38.834441Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0004] Task initiated on local node
[2026-06-06T01:02:58.608659Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:02:58.609893Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:02:58.612673Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0008] Task initiated on local node
[2026-06-06T01:03:03.775166Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:03.775963Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:03:03.778885Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-06T01:03:03.840183Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:03.840894Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:03:03.843461Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0009] Task initiated on local node
[2026-06-06T01:03:09.005909Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.006563Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.009604Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-06T01:03:09.070972Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.071647Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.074152Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0009] Task initiated on local node
[2026-06-06T01:03:09.135620Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.136306Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.138710Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-06T01:03:09.200287Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.200946Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.203215Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0007] Task initiated on local node
[2026-06-06T01:03:09.232977Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.233607Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:03:09.235951Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0006] Task initiated on local node
[2026-06-06T01:03:41.556705Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:41.557945Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:03:41.560459Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0008] Task initiated on local node
[2026-06-06T01:03:41.621872Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:03:41.622536Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:03:41.625128Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0011] Task initiated on local node
[2026-06-06T01:04:32.746431Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.747460Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.750096Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-06T01:04:32.811376Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.812011Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:04:32.814727Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-06T01:05:05.285007Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:05.285885Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:05:05.288728Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0010] Task initiated on local node
[2026-06-06T01:05:05.350138Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:05.350774Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:05:05.353363Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0004] Task initiated on local node
[2026-06-06T01:05:05.414669Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:05.415317Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:05:05.418025Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0002] Task initiated on local node
[2026-06-06T01:05:06.231457Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.232186Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.234871Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0006] Task initiated on local node
[2026-06-06T01:05:06.296164Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.296789Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:05:06.299360Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-06T01:05:17.163740Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:17.164806Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:05:17.167394Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0009] Task initiated on local node
[2026-06-06T01:05:17.228722Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:17.229331Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:05:17.231672Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0006] Task initiated on local node
[2026-06-06T01:05:17.261433Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:17.262032Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:05:17.264477Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0000] Task initiated on local node
[2026-06-06T01:05:18.228082Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:18.228722Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:05:18.231362Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0011] Task initiated on local node
[2026-06-06T01:05:18.292884Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:18.293469Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:05:18.295836Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0007] Task initiated on local node
[2026-06-06T01:05:37.418066Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:37.419406Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:05:37.422023Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0011] Task initiated on local node
[2026-06-06T01:05:37.483353Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:37.483914Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:05:37.486373Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0008] Task initiated on local node
[2026-06-06T01:05:50.304963Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:50.306125Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:05:50.308812Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0002] Task initiated on local node
[2026-06-06T01:05:50.370051Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:05:50.370610Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:05:50.373278Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-06T01:06:32.693889Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:32.695292Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:06:32.697801Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-06T01:06:32.759106Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:32.759943Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:06:32.762443Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0005] Task initiated on local node
[2026-06-06T01:06:34.476425Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:34.477259Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:06:34.480406Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-06T01:06:52.047447Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:52.048678Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-06T01:06:52.051384Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-06T01:06:52.112619Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:52.113452Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:06:52.116007Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0005] Task initiated on local node
[2026-06-06T01:06:52.177374Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:52.178141Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:06:52.180445Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0005] Task initiated on local node
[2026-06-06T01:06:52.209959Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:52.210687Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:06:52.213022Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0008] Task initiated on local node
[2026-06-06T01:06:52.274661Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:52.275367Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:06:52.277798Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0003] Task initiated on local node
[2026-06-06T01:06:55.995047Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:55.995842Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-06-06T01:06:55.998358Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0007] Task initiated on local node
[2026-06-06T01:06:56.059716Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.060442Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.062769Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-06T01:06:56.124271Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.125016Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.127397Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-06T01:06:56.188894Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.189608Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.192024Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-06T01:06:56.221363Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.222053Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.224787Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0001] Task initiated on local node
[2026-06-06T01:06:56.285896Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.286597Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.288992Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0001] Task initiated on local node
[2026-06-06T01:06:56.318466Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.319141Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.321675Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0000] Task initiated on local node
[2026-06-06T01:06:56.382978Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.383662Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.386109Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0004] Task initiated on local node
[2026-06-06T01:06:56.447571Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.448174Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.450326Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0004] Task initiated on local node
[2026-06-06T01:06:56.479872Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.480473Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.482934Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0002] Task initiated on local node
[2026-06-06T01:06:56.544348Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.544934Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.547208Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0002] Task initiated on local node
[2026-06-06T01:06:56.576808Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.577421Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:06:56.579698Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-06T01:07:09.698593Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:09.699589Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:07:09.702447Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0003] Task initiated on local node
[2026-06-06T01:07:09.763534Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:09.763986Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:07:09.766440Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0001] Task initiated on local node
[2026-06-06T01:07:09.828229Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:09.828681Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:07:09.830935Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_009_chr10_0000] Task initiated on local node
[2026-06-06T01:07:09.892783Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:09.893220Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:07:09.895444Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0000] Task initiated on local node
[2026-06-06T01:07:09.957093Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:09.957526Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-06-06T01:07:09.959744Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0003] Task initiated on local node
[2026-06-06T01:07:09.989279Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:15.504668Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:15.505170Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-06T01:07:15.508005Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-06T01:07:15.569127Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:41.637725Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:07:41.638752Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-06T01:07:41.641529Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-06T01:07:41.703148Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:12.622649Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:12.623987Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-06-06T01:08:12.626833Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0000] Task initiated on local node
[2026-06-06T01:08:12.688141Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:17.903142Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:08:17.903544Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-06T01:08:17.906084Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-06T01:08:17.935457Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-06T01:09:14.558487Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:09:14.559419Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-06-06T01:09:14.561826Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0005] Task initiated on local node
[2026-06-06T01:09:14.623452Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-06-06T01:09:42.496248Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:09:42.497340Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-06T01:09:42.499773Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-06T01:09:42.561458Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.896710Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.897741Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.900221Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0010] Task initiated on local node
[2026-06-06T01:12:34.961637Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.961890Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.962014Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.962825Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.964399Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.965128Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-06T01:12:34.967768Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-06T01:12:34.968495Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-06T01:12:34.997149Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.997217Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.997241Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.997431Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:12:34.998144Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-06T01:12:35.000565Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-06T01:12:35.001476Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-06T01:12:35.063329Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:35.063390Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:35.063563Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-06T01:12:35.065727Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-06T01:12:35.095487Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-06T01:12:48.217071Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-06T01:13:03.101781Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-06T01:13:03.101781Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] 
[2026-06-06T01:13:03.101781Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-06T01:13:03.101844Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] 
[2026-06-06T01:13:03.101855Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-06T01:13:03.101862Z] [nf-3a34a90b4f9cf1d7e0fdcf80cfc21be8-5a431-n5vkd] [584_1] [WorkflowRunner] Elapsed time for full workflow: 678 sec