cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_27F-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1136_27F-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1136_27F-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1136_27F-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1136_27F-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1136_27F-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:169000001, elapsed 19.0s, est remaining 361.1s, peak mem 5768MB, user 408.6s, sys 4.3s, output queue size 150
progress 10% @chr2:38000001, elapsed 33.9s, est remaining 305.3s, peak mem 8085MB, user 924.1s, sys 7.3s, output queue size 166
progress 15% @chr2:237000001, elapsed 48.8s, est remaining 276.4s, peak mem 8867MB, user 1381.4s, sys 9.2s, output queue size 210
progress 20% @chr3:155000001, elapsed 61.0s, est remaining 244.0s, peak mem 8867MB, user 1771.6s, sys 10.3s, output queue size 283
progress 25% @chr4:129000001, elapsed 71.8s, est remaining 215.3s, peak mem 8935MB, user 2084.5s, sys 11.1s, output queue size 444
progress 30% @chr5:107000001, elapsed 79.8s, est remaining 186.3s, peak mem 9120MB, user 2338.2s, sys 11.9s, output queue size 464
progress 35% @chr6:70000001, elapsed 92.8s, est remaining 172.4s, peak mem 9444MB, user 2696.9s, sys 12.8s, output queue size 625
progress 40% @chr7:54000001, elapsed 112.5s, est remaining 168.8s, peak mem 10724MB, user 3200.3s, sys 14.4s, output queue size 786
progress 45% @chr8:74000001, elapsed 129.7s, est remaining 158.5s, peak mem 11076MB, user 3802.2s, sys 16.0s, output queue size 212
progress 50% @chr9:87000001, elapsed 144.5s, est remaining 144.5s, peak mem 12768MB, user 4186.2s, sys 17.0s, output queue size 366
progress 55% @chr10:117000001, elapsed 162.9s, est remaining 133.3s, peak mem 15278MB, user 4720.1s, sys 18.2s, output queue size 485
progress 60% @chr12:2000001, elapsed 183.0s, est remaining 122.0s, peak mem 16842MB, user 5296.7s, sys 19.2s, output queue size 647
progress 65% @chr13:39000001, elapsed 199.5s, est remaining 107.4s, peak mem 16968MB, user 5888.7s, sys 21.1s, output queue size 809
progress 70% @chr14:85000001, elapsed 209.7s, est remaining 89.9s, peak mem 17156MB, user 6213.2s, sys 21.9s, output queue size 970
progress 75% @chr16:42000001, elapsed 231.6s, est remaining 77.2s, peak mem 17330MB, user 6813.7s, sys 23.2s, output queue size 1132
progress 80% @chr18:29000001, elapsed 264.0s, est remaining 66.0s, peak mem 17390MB, user 7589.0s, sys 24.7s, output queue size 1294
progress 85% @chr20:23000001, elapsed 295.1s, est remaining 52.1s, peak mem 18258MB, user 8493.9s, sys 26.6s, output queue size 1456
progress 90% @chrX:24000001, elapsed 316.5s, est remaining 35.2s, peak mem 18669MB, user 9011.8s, sys 27.9s, output queue size 1618
progress 95% @chrY:55000001, elapsed 326.6s, est remaining 17.2s, peak mem 19181MB, user 9398.1s, sys 28.8s, output queue size 1780
progress 100% @chr7:55000001, elapsed 1523.8s, est remaining 0.0s, peak mem 21579MB, user 11507.2s, sys 51.5s, output queue size 5204
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 99749239266
reads: 2068464941
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1640.214 user 33.994 sys 1675.730 real
done: 1 calls 0.069 user 0.000 sys 0.073 real
exec_no_coor: 1 calls 0.030 user 0.052 sys 0.106 real
execute: 1 calls 0.007 user 0.003 sys 1524.723 real
idle: 35755 calls 0.917 user 0.353 sys 35737.562 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 22628184064 mem 11510.065 user 52.847 sys 1526.411 real