Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/c6f724bf1142e493bd51813c17eeb6/1136_76X-T1-TDNA-1_A23MHWWLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/4f523243ed68037a2fd1b57f565da3/1136_76X-T1-TDNA-1_A23MHWWLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/9a9bec2c9fd7b487fabd7b4fc6d01e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/1ca7ce367eda355b7ef43a1ad9998f/1136_76X-T1-TDNA-1_A23MHWWLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/45926e042ee4576bb09ae895ba5003/1136_76X-T1-TDNA-1_A23MHWWLT4_1.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/37/46056601b7a190d7a00498b0fe72a3/1136_76X-T1-TDNA-1_A23MHWWLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/f7c9ee3c994982b2a1a3b1e24dce07/1136_76X-T1-TDNA-1_A23MHWWLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/eba02307739035dc473c7fe028a96e/1136_76X-T1-TDNA-1_A23MHWWLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/5b432e57d1d53b6d777bcb6f63d49e/1136_76X-T1-TDNA-1_A23MHWWLT4_1.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/9a9bec2c9fd7b487fabd7b4fc6d01e/.command.run
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory