cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_253-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1136_253-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1136_253-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1136_253-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1136_253-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1136_253-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:187000001, elapsed 12.5s, est remaining 238.4s, peak mem 3817MB, user 277.4s, sys 3.4s, output queue size 146
progress 10% @chr2:94000001, elapsed 23.2s, est remaining 209.0s, peak mem 6295MB, user 623.8s, sys 6.2s, output queue size 166
progress 15% @chr2:25000001, elapsed 34.0s, est remaining 192.5s, peak mem 7612MB, user 973.0s, sys 8.6s, output queue size 210
progress 20% @chr3:174000001, elapsed 42.7s, est remaining 170.9s, peak mem 7666MB, user 1226.8s, sys 9.7s, output queue size 283
progress 25% @chr4:124000001, elapsed 50.5s, est remaining 151.6s, peak mem 7736MB, user 1485.2s, sys 10.5s, output queue size 302
progress 30% @chr5:94000001, elapsed 56.7s, est remaining 132.3s, peak mem 7869MB, user 1656.7s, sys 10.9s, output queue size 464
progress 35% @chr6:91000001, elapsed 66.4s, est remaining 123.4s, peak mem 8171MB, user 1929.1s, sys 12.1s, output queue size 625
progress 40% @chr6:29000001, elapsed 76.2s, est remaining 114.3s, peak mem 8236MB, user 2244.5s, sys 13.7s, output queue size 197
progress 45% @chr8:78000001, elapsed 86.7s, est remaining 106.0s, peak mem 8471MB, user 2578.1s, sys 14.7s, output queue size 204
progress 50% @chr9:88000001, elapsed 95.7s, est remaining 95.7s, peak mem 8683MB, user 2826.6s, sys 16.2s, output queue size 366
progress 55% @chr10:99000001, elapsed 107.1s, est remaining 87.6s, peak mem 8969MB, user 3149.0s, sys 17.4s, output queue size 485
progress 60% @chr12:1000001, elapsed 118.7s, est remaining 79.1s, peak mem 8969MB, user 3497.7s, sys 18.6s, output queue size 510
progress 65% @chr13:39000001, elapsed 130.5s, est remaining 70.2s, peak mem 9081MB, user 3868.2s, sys 19.7s, output queue size 474
progress 70% @chr14:85000001, elapsed 137.5s, est remaining 58.9s, peak mem 9081MB, user 4085.4s, sys 20.5s, output queue size 635
progress 75% @chr16:42000001, elapsed 151.3s, est remaining 50.4s, peak mem 9081MB, user 4502.5s, sys 21.8s, output queue size 461
progress 80% @chr18:25000001, elapsed 172.1s, est remaining 43.0s, peak mem 9081MB, user 5005.5s, sys 23.3s, output queue size 623
progress 85% @chr19:40000001, elapsed 190.0s, est remaining 33.5s, peak mem 9081MB, user 5633.3s, sys 25.0s, output queue size 785
progress 90% @chrX:24000001, elapsed 200.8s, est remaining 22.3s, peak mem 9081MB, user 5932.8s, sys 25.9s, output queue size 947
progress 95% @chrY:55000001, elapsed 207.5s, est remaining 10.9s, peak mem 9328MB, user 6115.7s, sys 26.5s, output queue size 1109
progress 100% @chr22:23000001, elapsed 232.9s, est remaining 0.0s, peak mem 9328MB, user 6566.5s, sys 27.7s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 71204379079
reads: 1300983781
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1128.464 user 21.927 sys 1149.527 real
done: 1 calls 0.076 user 0.010 sys 0.087 real
exec_no_coor: 1 calls 0.014 user 0.000 sys 0.021 real
execute: 1 calls 0.001 user 0.001 sys 233.103 real
idle: 695 calls 0.204 user 0.001 sys 663.287 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 9781276672 mem 6568.855 user 28.188 sys 234.511 real