File Info
- Filename
- output/Reports/Adapter_Metrics.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/efa91fc1793af7e19448772a3cc5c1/output/Reports/Adapter_Metrics.csv
- Size
- 7.4 KB
- Attempt
Content
View in new tab| Lane | Sample_ID | index | index2 | ReadNumber | AdapterBases | SampleBases | % Adapter Bases |
| 8 | 1029_N5D-T1-TDNA-1_A23MHWWLT4_1 | TAGCGAGGCT | TTGCTCACGG | 1 | 0 | 20169792082 | 0.000 |
| 8 | 1029_N5D-T1-TDNA-1_A23MHWWLT4_1 | TAGCGAGGCT | TTGCTCACGG | 2 | 0 | 20169792082 | 0.000 |
| 8 | 1136_4Z5-T1-TDNA-1_A23MHWWLT4_1 | CCAACTGTAT | GCGCTAGAGA | 1 | 0 | 14505370758 | 0.000 |
| 8 | 1136_4Z5-T1-TDNA-1_A23MHWWLT4_1 | CCAACTGTAT | GCGCTAGAGA | 2 | 0 | 14505370758 | 0.000 |
| 8 | FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1 | GAGTAGTGAC | GCGATGCCAA | 1 | 0 | 12596535364 | 0.000 |
| 8 | FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1 | GAGTAGTGAC | GCGATGCCAA | 2 | 0 | 12596535364 | 0.000 |
| 8 | NTC_0002_0015_A23MHWWLT4_1 | CCAGTATTCT | ACGAAGCGAT | 1 | 0 | 905396 | 0.000 |
| 8 | NTC_0002_0015_A23MHWWLT4_1 | CCAGTATTCT | ACGAAGCGAT | 2 | 0 | 905396 | 0.000 |
| 8 | 1136_85O-T1-TDNA-1_A23MHWWLT4_1 | ATCATACCGC | ATGTCGTACT | 1 | 0 | 8331351010 | 0.000 |
| 8 | 1136_85O-T1-TDNA-1_A23MHWWLT4_1 | ATCATACCGC | ATGTCGTACT | 2 | 0 | 8331351010 | 0.000 |
| 8 | 1136_8DV-T1-TDNA-1_A23MHWWLT4_1 | ATTCGCACTA | TCTGTATGGT | 1 | 0 | 8607264703 | 0.000 |
| 8 | 1136_8DV-T1-TDNA-1_A23MHWWLT4_1 | ATTCGCACTA | TCTGTATGGT | 2 | 0 | 8607264703 | 0.000 |
| 8 | 1029_IWL-T1-TDNA-1_A23MHWWLT4_1 | CTCTTCAGCA | TTGTCTCTAC | 1 | 0 | 6568661117 | 0.000 |
| 8 | 1029_IWL-T1-TDNA-1_A23MHWWLT4_1 | CTCTTCAGCA | TTGTCTCTAC | 2 | 0 | 6568661117 | 0.000 |
| 8 | 659_cuO-T1-TDNA-1_A23MHWWLT4_1 | CTGTATGCCA | TTCCGGCTGT | 1 | 0 | 1707318344 | 0.000 |
| 8 | 659_cuO-T1-TDNA-1_A23MHWWLT4_1 | CTGTATGCCA | TTCCGGCTGT | 2 | 0 | 1707318344 | 0.000 |
| 8 | 1136_3U6-T1-TDNA-1_A23MHWWLT4_1 | TCTGACTATG | TAACCAGATC | 1 | 0 | 19159864671 | 0.000 |
| 8 | 1136_3U6-T1-TDNA-1_A23MHWWLT4_1 | TCTGACTATG | TAACCAGATC | 2 | 0 | 19159864671 | 0.000 |
| 8 | 659_dm4-T1-TDNA-1_A23MHWWLT4_1 | TGTGACGTAT | GCAGCGTTAG | 1 | 0 | 10354553653 | 0.000 |
| 8 | 659_dm4-T1-TDNA-1_A23MHWWLT4_1 | TGTGACGTAT | GCAGCGTTAG | 2 | 0 | 10354553653 | 0.000 |
| 8 | 659_bgw-T1-TDNA-1_A23MHWWLT4_1 | AGAAGATTGG | AGAAGGTACT | 1 | 0 | 12532490526 | 0.000 |
| 8 | 659_bgw-T1-TDNA-1_A23MHWWLT4_1 | AGAAGATTGG | AGAAGGTACT | 2 | 0 | 12532490526 | 0.000 |
| 8 | 659_eKx-T1-TDNA-1_A23MHWWLT4_1 | ATCCAGCATG | AGAGCTCTAC | 1 | 0 | 36052307 | 0.000 |
| 8 | 659_eKx-T1-TDNA-1_A23MHWWLT4_1 | ATCCAGCATG | AGAGCTCTAC | 2 | 0 | 36052307 | 0.000 |
| 8 | 1136_4ZB-T1-TDNA-1_A23MHWWLT4_1 | GCGCCATATA | GAACCTCCTA | 1 | 0 | 7687931403 | 0.000 |
| 8 | 1136_4ZB-T1-TDNA-1_A23MHWWLT4_1 | GCGCCATATA | GAACCTCCTA | 2 | 0 | 7687931403 | 0.000 |
| 8 | 1136_5L2-T1-TDNA-1_A23MHWWLT4_1 | CACTCGCATA | GAACGCGACA | 1 | 0 | 9831905658 | 0.000 |
| 8 | 1136_5L2-T1-TDNA-1_A23MHWWLT4_1 | CACTCGCATA | GAACGCGACA | 2 | 0 | 9831905658 | 0.000 |
| 8 | 659_Lx-T1-TDNA-1_A23MHWWLT4_1 | AAGGTCAATG | GCATTATAGG | 1 | 0 | 42556632 | 0.000 |
| 8 | 659_Lx-T1-TDNA-1_A23MHWWLT4_1 | AAGGTCAATG | GCATTATAGG | 2 | 0 | 42556632 | 0.000 |
| 8 | 1136_4GR-T1-TDNA-1_A23MHWWLT4_1 | GTGACGCACA | CGTTGTTGCG | 1 | 0 | 10077531922 | 0.000 |
| 8 | 1136_4GR-T1-TDNA-1_A23MHWWLT4_1 | GTGACGCACA | CGTTGTTGCG | 2 | 0 | 10077531922 | 0.000 |
| 8 | 1136_6TL-T1-TDNA-1_A23MHWWLT4_1 | TGTCAGGCTT | GATTCCTTAC | 1 | 0 | 8622179879 | 0.000 |
| 8 | 1136_6TL-T1-TDNA-1_A23MHWWLT4_1 | TGTCAGGCTT | GATTCCTTAC | 2 | 0 | 8622179879 | 0.000 |
| 8 | 1136_27F-T1-TDNA-1_A23MHWWLT4_1 | CACGTGATGG | TACAACGTGT | 1 | 0 | 19903726156 | 0.000 |
| 8 | 1136_27F-T1-TDNA-1_A23MHWWLT4_1 | CACGTGATGG | TACAACGTGT | 2 | 0 | 19903726156 | 0.000 |
| 8 | 1029_T05-T1-TDNA-1_A23MHWWLT4_1 | CCATCACGTG | TCTCCTGGTT | 1 | 0 | 15093508510 | 0.000 |
| 8 | 1029_T05-T1-TDNA-1_A23MHWWLT4_1 | CCATCACGTG | TCTCCTGGTT | 2 | 0 | 15093508510 | 0.000 |
| 8 | 659_d0M-T1-TDNA-1_A23MHWWLT4_1 | ACCAGGAATT | AGCATGGCAT | 1 | 0 | 12214475164 | 0.000 |
| 8 | 659_d0M-T1-TDNA-1_A23MHWWLT4_1 | ACCAGGAATT | AGCATGGCAT | 2 | 0 | 12214475164 | 0.000 |
| 8 | 659_Kh-T1-TDNA-1_A23MHWWLT4_1 | TAAGGCTCAC | GACGTTACTT | 1 | 0 | 11531223569 | 0.000 |
| 8 | 659_Kh-T1-TDNA-1_A23MHWWLT4_1 | TAAGGCTCAC | GACGTTACTT | 2 | 0 | 11531223569 | 0.000 |
| 8 | 1029_BICJ-T1-TDNA-1_A23MHWWLT4_1 | TGGCACTGAT | GCCATAGAAT | 1 | 0 | 9305899272 | 0.000 |
| 8 | 1029_BICJ-T1-TDNA-1_A23MHWWLT4_1 | TGGCACTGAT | GCCATAGAAT | 2 | 0 | 9305899272 | 0.000 |
| 8 | 1029_HTI-T1-TDNA-1_A23MHWWLT4_1 | CATATGGTGC | ACAGATCTCA | 1 | 0 | 13968833330 | 0.000 |
| 8 | 1029_HTI-T1-TDNA-1_A23MHWWLT4_1 | CATATGGTGC | ACAGATCTCA | 2 | 0 | 13968833330 | 0.000 |
| 8 | 1136_86S-T1-TDNA-1_A23MHWWLT4_1 | GCACTACCAG | GAAGACTTAG | 1 | 0 | 13700164617 | 0.000 |
| 8 | 1136_86S-T1-TDNA-1_A23MHWWLT4_1 | GCACTACCAG | GAAGACTTAG | 2 | 0 | 13700164617 | 0.000 |
| 8 | 1136_5KC-T1-TDNA-1_A23MHWWLT4_1 | GCATAAGATC | GAGAACTGGA | 1 | 0 | 9552815529 | 0.000 |
| 8 | 1136_5KC-T1-TDNA-1_A23MHWWLT4_1 | GCATAAGATC | GAGAACTGGA | 2 | 0 | 9552815529 | 0.000 |
| 8 | 1136_5TB-T1-TDNA-1_A23MHWWLT4_1 | AAGGTGTACT | AGCGCTACAG | 1 | 0 | 17763349023 | 0.000 |
| 8 | 1136_5TB-T1-TDNA-1_A23MHWWLT4_1 | AAGGTGTACT | AGCGCTACAG | 2 | 0 | 17763349023 | 0.000 |
| 8 | 1029_I9B-T1-TDNA-1_A23MHWWLT4_1 | CTTCTAACCG | TGATCAGTCT | 1 | 0 | 15198947733 | 0.000 |
| 8 | 1029_I9B-T1-TDNA-1_A23MHWWLT4_1 | CTTCTAACCG | TGATCAGTCT | 2 | 0 | 15198947733 | 0.000 |
| 8 | 1136_00H-T1-TDNA-1_A23MHWWLT4_1 | TCGACCAGCA | GTTCGAACTC | 1 | 0 | 13642468876 | 0.000 |
| 8 | 1136_00H-T1-TDNA-1_A23MHWWLT4_1 | TCGACCAGCA | GTTCGAACTC | 2 | 0 | 13642468876 | 0.000 |
| 8 | 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1 | GTGACACGTC | CTTACACTGA | 1 | 0 | 4920773806 | 0.000 |
| 8 | 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1 | GTGACACGTC | CTTACACTGA | 2 | 0 | 4920773806 | 0.000 |
| 8 | 1136_253-T1-TDNA-1_A23MHWWLT4_1 | AATGGACGCG | AAGTGCACCG | 1 | 0 | 12711855121 | 0.000 |
| 8 | 1136_253-T1-TDNA-1_A23MHWWLT4_1 | AATGGACGCG | AAGTGCACCG | 2 | 0 | 12711855121 | 0.000 |
| 8 | 1136_5Q-T1-TDNA-1_A23MHWWLT4_1 | TCTCCGTACT | AGTTGTGATC | 1 | 0 | 11881920918 | 0.000 |
| 8 | 1136_5Q-T1-TDNA-1_A23MHWWLT4_1 | TCTCCGTACT | AGTTGTGATC | 2 | 0 | 11881920918 | 0.000 |
| 8 | 659_cfy-T1-TDNA-1_A23MHWWLT4_1 | TGGAAGCACA | TCCAACACCG | 1 | 0 | 13610426978 | 0.000 |
| 8 | 659_cfy-T1-TDNA-1_A23MHWWLT4_1 | TGGAAGCACA | TCCAACACCG | 2 | 0 | 13610426978 | 0.000 |
| 8 | 1136_7OW-T1-TDNA-1_A23MHWWLT4_1 | GATAGACAAC | GTGTTCACGT | 1 | 0 | 12692971967 | 0.000 |
| 8 | 1136_7OW-T1-TDNA-1_A23MHWWLT4_1 | GATAGACAAC | GTGTTCACGT | 2 | 0 | 12692971967 | 0.000 |
| 8 | 1136_87O-T1-TDNA-1_A23MHWWLT4_1 | AGCGTCTCAT | CCTAGGCGAT | 1 | 0 | 12530789360 | 0.000 |
| 8 | 1136_87O-T1-TDNA-1_A23MHWWLT4_1 | AGCGTCTCAT | CCTAGGCGAT | 2 | 0 | 12530789360 | 0.000 |
| 8 | 1029_FRC-T1-TDNA-1_A23MHWWLT4_1 | CTCTATACTG | CGTTCAACCG | 1 | 0 | 13949035418 | 0.000 |
| 8 | 1029_FRC-T1-TDNA-1_A23MHWWLT4_1 | CTCTATACTG | CGTTCAACCG | 2 | 0 | 13949035418 | 0.000 |
| 8 | 1029_FZX-T1-TDNA-1_A23MHWWLT4_1 | ATAGCCGGTT | TCTTATCCGG | 1 | 0 | 12512893595 | 0.000 |
| 8 | 1029_FZX-T1-TDNA-1_A23MHWWLT4_1 | ATAGCCGGTT | TCTTATCCGG | 2 | 0 | 12512893595 | 0.000 |
| 8 | 1136_3MV-T1-TDNA-1_A23MHWWLT4_1 | GTTCTCATCA | CCTCCATTCT | 1 | 0 | 12280900819 | 0.000 |
| 8 | 1136_3MV-T1-TDNA-1_A23MHWWLT4_1 | GTTCTCATCA | CCTCCATTCT | 2 | 0 | 12280900819 | 0.000 |
| 8 | 659_bR4-T1-TDNA-1_A23MHWWLT4_1 | CAATGCGTGT | ATGTTCGCGC | 1 | 0 | 16222818937 | 0.000 |
| 8 | 659_bR4-T1-TDNA-1_A23MHWWLT4_1 | CAATGCGTGT | ATGTTCGCGC | 2 | 0 | 16222818937 | 0.000 |
| 8 | 659_cVw-T1-TDNA-1_A23MHWWLT4_1 | TGAGTGTACA | ATTCGCCGGT | 1 | 0 | 15622047619 | 0.000 |
| 8 | 659_cVw-T1-TDNA-1_A23MHWWLT4_1 | TGAGTGTACA | ATTCGCCGGT | 2 | 0 | 15622047619 | 0.000 |
| 8 | 1136_7GC-T1-TDNA-1_A23MHWWLT4_1 | TGCTTCCAAG | CAGATGTTAC | 1 | 0 | 14752647301 | 0.000 |
| 8 | 1136_7GC-T1-TDNA-1_A23MHWWLT4_1 | TGCTTCCAAG | CAGATGTTAC | 2 | 0 | 14752647301 | 0.000 |
| 8 | 1136_76X-T1-TDNA-1_A23MHWWLT4_1 | CCTACTCTGC | TGCAATTGGC | 1 | 0 | 10434011061 | 0.000 |
| 8 | 1136_76X-T1-TDNA-1_A23MHWWLT4_1 | CCTACTCTGC | TGCAATTGGC | 2 | 0 | 10434011061 | 0.000 |
| 8 | 1047_JG-T1-TDNA-1_A23MHWWLT4_1 | TCGCTGAGAG | AATGCTCTAG | 1 | 0 | 29691494514 | 0.000 |
| 8 | 1047_JG-T1-TDNA-1_A23MHWWLT4_1 | TCGCTGAGAG | AATGCTCTAG | 2 | 0 | 29691494514 | 0.000 |
| 8 | 1136_3LU-T1-TDNA-1_A23MHWWLT4_1 | CGCTAATTGC | CCATCGCATT | 1 | 0 | 14374532429 | 0.000 |
| 8 | 1136_3LU-T1-TDNA-1_A23MHWWLT4_1 | CGCTAATTGC | CCATCGCATT | 2 | 0 | 14374532429 | 0.000 |
| 8 | 659_cAd-T1-TDNA-1_A23MHWWLT4_1 | TCAGCTGTCA | ACAGCTCCTG | 1 | 0 | 12032739265 | 0.000 |
| 8 | 659_cAd-T1-TDNA-1_A23MHWWLT4_1 | TCAGCTGTCA | ACAGCTCCTG | 2 | 0 | 12032739265 | 0.000 |
| 8 | 1136_3WJ-T1-TDNA-1_A23MHWWLT4_1 | AGACGACAGA | GAGCTGGAAT | 1 | 0 | 7216130091 | 0.000 |
| 8 | 1136_3WJ-T1-TDNA-1_A23MHWWLT4_1 | AGACGACAGA | GAGCTGGAAT | 2 | 0 | 7216130091 | 0.000 |
| 8 | 1136_6G2-T1-TDNA-1_A23MHWWLT4_1 | TAGGTCCAGA | TGCTCATCCG | 1 | 0 | 10464221631 | 0.000 |
| 8 | 1136_6G2-T1-TDNA-1_A23MHWWLT4_1 | TAGGTCCAGA | TGCTCATCCG | 2 | 0 | 10464221631 | 0.000 |
| 8 | 1136_4XR-T1-TDNA-1_A23MHWWLT4_1 | TAACCTGAAC | TCAATTGACG | 1 | 0 | 11758821490 | 0.000 |
| 8 | 1136_4XR-T1-TDNA-1_A23MHWWLT4_1 | TAACCTGAAC | TCAATTGACG | 2 | 0 | 11758821490 | 0.000 |
| 8 | 1136_81F-T1-TDNA-1_A23MHWWLT4_1 | GATAGGTGAA | AGACGCAAGA | 1 | 0 | 11038102416 | 0.000 |
| 8 | 1136_81F-T1-TDNA-1_A23MHWWLT4_1 | GATAGGTGAA | AGACGCAAGA | 2 | 0 | 11038102416 | 0.000 |
| 8 | Undetermined | 1 | 0 | 22479624737 | 0.000 | ||
| 8 | Undetermined | 2 | 0 | 22479624737 | 0.000 |
99 rows