File Info

Filename
output/Reports/Quality_Metrics.csv
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/efa91fc1793af7e19448772a3cc5c1/output/Reports/Quality_Metrics.csv
Size
10.0 KB
Task
DAQ:BCL_TO_FASTQ:BCLCONVERT (A23MHWWLT4;L008)
Attempt

Content

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
8 1029_N5D-T1-TDNA-1_A23MHWWLT4_1 TAGCGAGGCT TTGCTCACGG 1 20169792082 18527293102 773663086132 38.36 0.92
8 1029_N5D-T1-TDNA-1_A23MHWWLT4_1 TAGCGAGGCT TTGCTCACGG 2 20169792082 17269946755 747237832000 37.05 0.86
8 1136_4Z5-T1-TDNA-1_A23MHWWLT4_1 CCAACTGTAT GCGCTAGAGA 1 14505370758 13655666481 563079361020 38.82 0.94
8 1136_4Z5-T1-TDNA-1_A23MHWWLT4_1 CCAACTGTAT GCGCTAGAGA 2 14505370758 13397406617 557591083976 38.44 0.92
8 FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1 GAGTAGTGAC GCGATGCCAA 1 12596535364 11507645872 482025746620 38.27 0.91
8 FFPE_HD789_01_p2_gDNA_01_A23MHWWLT4_1 GAGTAGTGAC GCGATGCCAA 2 12596535364 10526743170 461261051808 36.62 0.84
8 NTC_0002_0015_A23MHWWLT4_1 CCAGTATTCT ACGAAGCGAT 1 905396 623402 30290840 33.46 0.69
8 NTC_0002_0015_A23MHWWLT4_1 CCAGTATTCT ACGAAGCGAT 2 905396 272590 22358620 24.69 0.30
8 1136_85O-T1-TDNA-1_A23MHWWLT4_1 ATCATACCGC ATGTCGTACT 1 8331351010 7742123592 321235789452 38.56 0.93
8 1136_85O-T1-TDNA-1_A23MHWWLT4_1 ATCATACCGC ATGTCGTACT 2 8331351010 7471111894 315692592508 37.89 0.90
8 1136_8DV-T1-TDNA-1_A23MHWWLT4_1 ATTCGCACTA TCTGTATGGT 1 8607264703 8034166481 332472701636 38.63 0.93
8 1136_8DV-T1-TDNA-1_A23MHWWLT4_1 ATTCGCACTA TCTGTATGGT 2 8607264703 7841356393 328665423988 38.18 0.91
8 1029_IWL-T1-TDNA-1_A23MHWWLT4_1 CTCTTCAGCA TTGTCTCTAC 1 6568661117 6104291489 252943762028 38.51 0.93
8 1029_IWL-T1-TDNA-1_A23MHWWLT4_1 CTCTTCAGCA TTGTCTCTAC 2 6568661117 6089915554 252953505544 38.51 0.93
8 659_cuO-T1-TDNA-1_A23MHWWLT4_1 CTGTATGCCA TTCCGGCTGT 1 1707318344 1583236876 65723228068 38.50 0.93
8 659_cuO-T1-TDNA-1_A23MHWWLT4_1 CTGTATGCCA TTCCGGCTGT 2 1707318344 1543256605 64898959240 38.01 0.90
8 1136_3U6-T1-TDNA-1_A23MHWWLT4_1 TCTGACTATG TAACCAGATC 1 19159864671 17619168834 735297817632 38.38 0.92
8 1136_3U6-T1-TDNA-1_A23MHWWLT4_1 TCTGACTATG TAACCAGATC 2 19159864671 16462603278 711019845084 37.11 0.86
8 659_dm4-T1-TDNA-1_A23MHWWLT4_1 TGTGACGTAT GCAGCGTTAG 1 10354553653 9751631553 401935427772 38.82 0.94
8 659_dm4-T1-TDNA-1_A23MHWWLT4_1 TGTGACGTAT GCAGCGTTAG 2 10354553653 9633327834 399442036788 38.58 0.93
8 659_bgw-T1-TDNA-1_A23MHWWLT4_1 AGAAGATTGG AGAAGGTACT 1 12532490526 11679024089 484041464876 38.62 0.93
8 659_bgw-T1-TDNA-1_A23MHWWLT4_1 AGAAGATTGG AGAAGGTACT 2 12532490526 11257257483 475305830988 37.93 0.90
8 659_eKx-T1-TDNA-1_A23MHWWLT4_1 ATCCAGCATG AGAGCTCTAC 1 36052307 22784746 1165132372 32.32 0.63
8 659_eKx-T1-TDNA-1_A23MHWWLT4_1 ATCCAGCATG AGAGCTCTAC 2 36052307 11864292 918928788 25.49 0.33
8 1136_4ZB-T1-TDNA-1_A23MHWWLT4_1 GCGCCATATA GAACCTCCTA 1 7687931403 7187073585 297285613668 38.67 0.93
8 1136_4ZB-T1-TDNA-1_A23MHWWLT4_1 GCGCCATATA GAACCTCCTA 2 7687931403 7032538055 294163048640 38.26 0.91
8 1136_5L2-T1-TDNA-1_A23MHWWLT4_1 CACTCGCATA GAACGCGACA 1 9831905658 9059038257 377691408312 38.41 0.92
8 1136_5L2-T1-TDNA-1_A23MHWWLT4_1 CACTCGCATA GAACGCGACA 2 9831905658 8465576042 365257583240 37.15 0.86
8 659_Lx-T1-TDNA-1_A23MHWWLT4_1 AAGGTCAATG GCATTATAGG 1 42556632 28137430 1400338348 32.91 0.66
8 659_Lx-T1-TDNA-1_A23MHWWLT4_1 AAGGTCAATG GCATTATAGG 2 42556632 18027959 1177615844 27.67 0.42
8 1136_4GR-T1-TDNA-1_A23MHWWLT4_1 GTGACGCACA CGTTGTTGCG 1 10077531922 9353723907 388426131780 38.54 0.93
8 1136_4GR-T1-TDNA-1_A23MHWWLT4_1 GTGACGCACA CGTTGTTGCG 2 10077531922 9020397707 381561080888 37.86 0.90
8 1136_6TL-T1-TDNA-1_A23MHWWLT4_1 TGTCAGGCTT GATTCCTTAC 1 8622179879 8052750213 333320289984 38.66 0.93
8 1136_6TL-T1-TDNA-1_A23MHWWLT4_1 TGTCAGGCTT GATTCCTTAC 2 8622179879 7831914296 328793557928 38.13 0.91
8 1136_27F-T1-TDNA-1_A23MHWWLT4_1 CACGTGATGG TACAACGTGT 1 19903726156 18508212424 767829432448 38.58 0.93
8 1136_27F-T1-TDNA-1_A23MHWWLT4_1 CACGTGATGG TACAACGTGT 2 19903726156 17977481668 756945019264 38.03 0.90
8 1029_T05-T1-TDNA-1_A23MHWWLT4_1 CCATCACGTG TCTCCTGGTT 1 15093508510 13938919542 580392818304 38.45 0.92
8 1029_T05-T1-TDNA-1_A23MHWWLT4_1 CCATCACGTG TCTCCTGGTT 2 15093508510 13208231683 565188892600 37.45 0.88
8 659_d0M-T1-TDNA-1_A23MHWWLT4_1 ACCAGGAATT AGCATGGCAT 1 12214475164 11305423954 470310081724 38.50 0.93
8 659_d0M-T1-TDNA-1_A23MHWWLT4_1 ACCAGGAATT AGCATGGCAT 2 12214475164 10590568857 455268678372 37.27 0.87
8 659_Kh-T1-TDNA-1_A23MHWWLT4_1 TAAGGCTCAC GACGTTACTT 1 11531223569 10530096346 441161540572 38.26 0.91
8 659_Kh-T1-TDNA-1_A23MHWWLT4_1 TAAGGCTCAC GACGTTACTT 2 11531223569 9616030119 421792754364 36.58 0.83
8 1029_BICJ-T1-TDNA-1_A23MHWWLT4_1 TGGCACTGAT GCCATAGAAT 1 9305899272 8744862895 360734912716 38.76 0.94
8 1029_BICJ-T1-TDNA-1_A23MHWWLT4_1 TGGCACTGAT GCCATAGAAT 2 9305899272 8638745785 358624412404 38.54 0.93
8 1029_HTI-T1-TDNA-1_A23MHWWLT4_1 CATATGGTGC ACAGATCTCA 1 13968833330 13022289652 539685266476 38.63 0.93
8 1029_HTI-T1-TDNA-1_A23MHWWLT4_1 CATATGGTGC ACAGATCTCA 2 13968833330 12645586137 531819930972 38.07 0.91
8 1136_86S-T1-TDNA-1_A23MHWWLT4_1 GCACTACCAG GAAGACTTAG 1 13700164617 12757492796 528835814912 38.60 0.93
8 1136_86S-T1-TDNA-1_A23MHWWLT4_1 GCACTACCAG GAAGACTTAG 2 13700164617 12385847801 521238469208 38.05 0.90
8 1136_5KC-T1-TDNA-1_A23MHWWLT4_1 GCATAAGATC GAGAACTGGA 1 9552815529 8859140028 368103852312 38.53 0.93
8 1136_5KC-T1-TDNA-1_A23MHWWLT4_1 GCATAAGATC GAGAACTGGA 2 9552815529 8391573412 358362834580 37.51 0.88
8 1136_5TB-T1-TDNA-1_A23MHWWLT4_1 AAGGTGTACT AGCGCTACAG 1 17763349023 16550833865 685930092044 38.61 0.93
8 1136_5TB-T1-TDNA-1_A23MHWWLT4_1 AAGGTGTACT AGCGCTACAG 2 17763349023 15972807428 674002155188 37.94 0.90
8 1029_I9B-T1-TDNA-1_A23MHWWLT4_1 CTTCTAACCG TGATCAGTCT 1 15198947733 14010276974 583909846484 38.42 0.92
8 1029_I9B-T1-TDNA-1_A23MHWWLT4_1 CTTCTAACCG TGATCAGTCT 2 15198947733 13246904155 568015042168 37.37 0.87
8 1136_00H-T1-TDNA-1_A23MHWWLT4_1 TCGACCAGCA GTTCGAACTC 1 13642468876 12388598043 520464276312 38.15 0.91
8 1136_00H-T1-TDNA-1_A23MHWWLT4_1 TCGACCAGCA GTTCGAACTC 2 13642468876 11319311137 497839124848 36.49 0.83
8 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1 GTGACACGTC CTTACACTGA 1 4920773806 4433198934 186118556124 37.82 0.90
8 1029_BCAN-T1-TDNA-1_A23MHWWLT4_1 GTGACACGTC CTTACACTGA 2 4920773806 4478433748 187560909964 38.12 0.91
8 1136_253-T1-TDNA-1_A23MHWWLT4_1 AATGGACGCG AAGTGCACCG 1 12711855121 11632535452 486730036108 38.29 0.92
8 1136_253-T1-TDNA-1_A23MHWWLT4_1 AATGGACGCG AAGTGCACCG 2 12711855121 10930981814 472012514792 37.13 0.86
8 1136_5Q-T1-TDNA-1_A23MHWWLT4_1 TCTCCGTACT AGTTGTGATC 1 11881920918 11011780291 457732537396 38.52 0.93
8 1136_5Q-T1-TDNA-1_A23MHWWLT4_1 TCTCCGTACT AGTTGTGATC 2 11881920918 10357939966 444074190784 37.37 0.87
8 659_cfy-T1-TDNA-1_A23MHWWLT4_1 TGGAAGCACA TCCAACACCG 1 13610426978 12610747472 524283247928 38.52 0.93
8 659_cfy-T1-TDNA-1_A23MHWWLT4_1 TGGAAGCACA TCCAACACCG 2 13610426978 12144339384 514565379180 37.81 0.89
8 1136_7OW-T1-TDNA-1_A23MHWWLT4_1 GATAGACAAC GTGTTCACGT 1 12692971967 11751741305 488753368076 38.51 0.93
8 1136_7OW-T1-TDNA-1_A23MHWWLT4_1 GATAGACAAC GTGTTCACGT 2 12692971967 11045908485 474025270836 37.35 0.87
8 1136_87O-T1-TDNA-1_A23MHWWLT4_1 AGCGTCTCAT CCTAGGCGAT 1 12530789360 11676639420 484026101496 38.63 0.93
8 1136_87O-T1-TDNA-1_A23MHWWLT4_1 AGCGTCTCAT CCTAGGCGAT 2 12530789360 11177526900 473593726548 37.79 0.89
8 1029_FRC-T1-TDNA-1_A23MHWWLT4_1 CTCTATACTG CGTTCAACCG 1 13949035418 12938808726 537507547656 38.53 0.93
8 1029_FRC-T1-TDNA-1_A23MHWWLT4_1 CTCTATACTG CGTTCAACCG 2 13949035418 12323587432 524744878732 37.62 0.88
8 1029_FZX-T1-TDNA-1_A23MHWWLT4_1 ATAGCCGGTT TCTTATCCGG 1 12512893595 11542757952 480958181496 38.44 0.92
8 1029_FZX-T1-TDNA-1_A23MHWWLT4_1 ATAGCCGGTT TCTTATCCGG 2 12512893595 10752207372 464356098708 37.11 0.86
8 1136_3MV-T1-TDNA-1_A23MHWWLT4_1 GTTCTCATCA CCTCCATTCT 1 12280900819 11292234067 471294868420 38.38 0.92
8 1136_3MV-T1-TDNA-1_A23MHWWLT4_1 GTTCTCATCA CCTCCATTCT 2 12280900819 10574940213 456248090856 37.15 0.86
8 659_bR4-T1-TDNA-1_A23MHWWLT4_1 CAATGCGTGT ATGTTCGCGC 1 16222818937 14948859302 623423027192 38.43 0.92
8 659_bR4-T1-TDNA-1_A23MHWWLT4_1 CAATGCGTGT ATGTTCGCGC 2 16222818937 13871639509 600723669268 37.03 0.86
8 659_cVw-T1-TDNA-1_A23MHWWLT4_1 TGAGTGTACA ATTCGCCGGT 1 15622047619 14425363952 600822202172 38.46 0.92
8 659_cVw-T1-TDNA-1_A23MHWWLT4_1 TGAGTGTACA ATTCGCCGGT 2 15622047619 13517390945 581757674912 37.24 0.87
8 1136_7GC-T1-TDNA-1_A23MHWWLT4_1 TGCTTCCAAG CAGATGTTAC 1 14752647301 13753471293 569700245808 38.62 0.93
8 1136_7GC-T1-TDNA-1_A23MHWWLT4_1 TGCTTCCAAG CAGATGTTAC 2 14752647301 13414381396 562858616080 38.15 0.91
8 1136_76X-T1-TDNA-1_A23MHWWLT4_1 CCTACTCTGC TGCAATTGGC 1 10434011061 9719911561 402884985268 38.61 0.93
8 1136_76X-T1-TDNA-1_A23MHWWLT4_1 CCTACTCTGC TGCAATTGGC 2 10434011061 9406814610 396442014720 38.00 0.90
8 1047_JG-T1-TDNA-1_A23MHWWLT4_1 TCGCTGAGAG AATGCTCTAG 1 29691494514 27800762508 1149245566116 38.71 0.94
8 1047_JG-T1-TDNA-1_A23MHWWLT4_1 TCGCTGAGAG AATGCTCTAG 2 29691494514 27188746360 1136748664864 38.29 0.92
8 1136_3LU-T1-TDNA-1_A23MHWWLT4_1 CGCTAATTGC CCATCGCATT 1 14374532429 13082639482 548980540612 38.19 0.91
8 1136_3LU-T1-TDNA-1_A23MHWWLT4_1 CGCTAATTGC CCATCGCATT 2 14374532429 11919009940 524367707332 36.48 0.83
8 659_cAd-T1-TDNA-1_A23MHWWLT4_1 TCAGCTGTCA ACAGCTCCTG 1 12032739265 11163038631 463788611808 38.54 0.93
8 659_cAd-T1-TDNA-1_A23MHWWLT4_1 TCAGCTGTCA ACAGCTCCTG 2 12032739265 10688832586 453911183608 37.72 0.89
8 1136_3WJ-T1-TDNA-1_A23MHWWLT4_1 AGACGACAGA GAGCTGGAAT 1 7216130091 6720279008 278534837396 38.60 0.93
8 1136_3WJ-T1-TDNA-1_A23MHWWLT4_1 AGACGACAGA GAGCTGGAAT 2 7216130091 6530565778 274665190336 38.06 0.90
8 1136_6G2-T1-TDNA-1_A23MHWWLT4_1 TAGGTCCAGA TGCTCATCCG 1 10464221631 9697380587 402984232220 38.51 0.93
8 1136_6G2-T1-TDNA-1_A23MHWWLT4_1 TAGGTCCAGA TGCTCATCCG 2 10464221631 9343401795 395705258412 37.82 0.89
8 1136_4XR-T1-TDNA-1_A23MHWWLT4_1 TAACCTGAAC TCAATTGACG 1 11758821490 10908586316 453291785768 38.55 0.93
8 1136_4XR-T1-TDNA-1_A23MHWWLT4_1 TAACCTGAAC TCAATTGACG 2 11758821490 10321342948 440950355248 37.50 0.88
8 1136_81F-T1-TDNA-1_A23MHWWLT4_1 GATAGGTGAA AGACGCAAGA 1 11038102416 10244454652 424704200452 38.48 0.93
8 1136_81F-T1-TDNA-1_A23MHWWLT4_1 GATAGGTGAA AGACGCAAGA 2 11038102416 10168871515 423551901316 38.37 0.92
8 Undetermined 1 22479624737 18709914387 820798870572 36.51 0.83
8 Undetermined 2 22479624737 17584663846 794722812844 35.35 0.78
99 rows