cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_4XR-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1136_4XR-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1136_4XR-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1136_4XR-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1136_4XR-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1136_4XR-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:181000001, elapsed 11.2s, est remaining 213.7s, peak mem 3837MB, user 255.0s, sys 2.8s, output queue size 146
progress 10% @chr2:46000001, elapsed 20.3s, est remaining 182.4s, peak mem 5579MB, user 552.0s, sys 4.6s, output queue size 166
progress 15% @chr2:201000001, elapsed 28.6s, est remaining 162.2s, peak mem 6378MB, user 818.5s, sys 6.4s, output queue size 188
progress 20% @chr3:178000001, elapsed 36.1s, est remaining 144.2s, peak mem 6480MB, user 1032.7s, sys 7.1s, output queue size 283
progress 25% @chr4:133000001, elapsed 42.8s, est remaining 128.4s, peak mem 6572MB, user 1256.1s, sys 7.8s, output queue size 302
progress 30% @chr5:94000001, elapsed 48.3s, est remaining 112.7s, peak mem 6761MB, user 1422.4s, sys 8.4s, output queue size 464
progress 35% @chr6:79000001, elapsed 56.0s, est remaining 104.0s, peak mem 6853MB, user 1639.1s, sys 9.2s, output queue size 625
progress 40% @chr7:48000001, elapsed 65.2s, est remaining 97.8s, peak mem 7032MB, user 1856.7s, sys 9.8s, output queue size 786
progress 45% @chr8:79000001, elapsed 75.0s, est remaining 91.7s, peak mem 7256MB, user 2206.1s, sys 10.8s, output queue size 356
progress 50% @chr9:102000001, elapsed 83.0s, est remaining 83.0s, peak mem 7556MB, user 2428.2s, sys 11.6s, output queue size 366
progress 55% @chr10:101000001, elapsed 93.3s, est remaining 76.3s, peak mem 7866MB, user 2709.1s, sys 12.6s, output queue size 527
progress 60% @chr12:5000001, elapsed 102.5s, est remaining 68.3s, peak mem 7875MB, user 3037.9s, sys 13.7s, output queue size 510
progress 65% @chr13:39000001, elapsed 111.5s, est remaining 60.0s, peak mem 7875MB, user 3281.3s, sys 14.5s, output queue size 672
progress 70% @chr14:85000001, elapsed 117.2s, est remaining 50.2s, peak mem 7898MB, user 3456.2s, sys 15.1s, output queue size 833
progress 75% @chr16:42000001, elapsed 128.2s, est remaining 42.7s, peak mem 7898MB, user 3835.6s, sys 16.0s, output queue size 461
progress 80% @chr18:25000001, elapsed 144.5s, est remaining 36.1s, peak mem 7898MB, user 4260.7s, sys 17.1s, output queue size 623
progress 85% @chr20:25000001, elapsed 158.1s, est remaining 27.9s, peak mem 7898MB, user 4682.9s, sys 18.1s, output queue size 785
progress 90% @chrX:12000001, elapsed 168.8s, est remaining 18.8s, peak mem 7933MB, user 5028.0s, sys 19.0s, output queue size 947
progress 95% @chrY:55000001, elapsed 176.3s, est remaining 9.3s, peak mem 8015MB, user 5263.4s, sys 19.6s, output queue size 675
progress 100% @chrX:67000001, elapsed 203.3s, est remaining 0.0s, peak mem 8061MB, user 5617.0s, sys 20.6s, output queue size 3540
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 61364023637
reads: 1205609827
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 979.155 user 17.407 sys 999.171 real
done: 1 calls 0.053 user 0.000 sys 0.058 real
exec_no_coor: 1 calls 0.015 user 0.000 sys 0.025 real
execute: 1 calls 0.005 user 0.005 sys 203.459 real
idle: 726 calls 0.160 user 0.001 sys 697.123 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 8452669440 mem 5619.050 user 20.867 sys 204.681 real