#!/bin/bash -Ceuo pipefail
echo "sequencing_library_id,secondary_sequencing_library_id,analysis,software,software_version,s3_path,s3_path_qc,s3_path_params,harmonized_s3_path" > results.csv
while IFS= read -r sample_id; do
    echo "${sample_id},,altera_inhouse_dna,daq,a2a872cdfc04ad78310425271e8afacedef0074a,s3://natera-rnd-pltf-dev-s3-gitlab-results/daq/build2802298/edge-cases-tissue-run/63697589/,s3://natera-rnd-pltf-dev-s3-gitlab-results/daq/build2802298/edge-cases-tissue-run/63697589/reports/postdedup_qc.json,s3://natera-rnd-pltf-dev-s3-gitlab-results/daq/build2802298/edge-cases-tissue-run/63697589/pipeline_info/params_2026-06-05_20-40-32.json," >> results.csv
done < sample_ids.txt

cat <<-END_VERSIONS > versions.yml
"DAQ:GENERATE_RESULTS_CSV":
    bash: $(bash --version | head -1 | awk '{print $4}')
END_VERSIONS