cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_00H-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo AlignmentStat 1136_00H-T1-TDNA-1_A23MHWWLT4_1.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo 1136_00H-T1-TDNA-1_A23MHWWLT4_1.sentieon.insert_size_metrics --algo QualDistribution 1136_00H-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle 1136_00H-T1-TDNA-1_A23MHWWLT4_1.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle 1136_00H-T1-TDNA-1_A23MHWWLT4_1.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:188000001, elapsed 12.2s, est remaining 231.4s, peak mem 4059MB, user 274.6s, sys 2.5s, output queue size 146
progress 10% @chr2:94000001, elapsed 22.4s, est remaining 201.5s, peak mem 5846MB, user 594.8s, sys 4.9s, output queue size 166
progress 15% @chr3:8000001, elapsed 33.1s, est remaining 187.5s, peak mem 9624MB, user 942.6s, sys 6.7s, output queue size 203
progress 20% @chr3:155000001, elapsed 42.8s, est remaining 171.0s, peak mem 9933MB, user 1200.0s, sys 7.5s, output queue size 364
progress 25% @chr4:134000001, elapsed 51.4s, est remaining 154.1s, peak mem 10107MB, user 1512.9s, sys 10.5s, output queue size 302
progress 30% @chr5:97000001, elapsed 57.7s, est remaining 134.7s, peak mem 10234MB, user 1672.7s, sys 11.1s, output queue size 464
progress 35% @chr6:70000001, elapsed 67.3s, est remaining 124.9s, peak mem 10522MB, user 1957.5s, sys 12.1s, output queue size 625
progress 40% @chr7:66000001, elapsed 78.7s, est remaining 118.0s, peak mem 10940MB, user 2241.6s, sys 12.7s, output queue size 786
progress 45% @chr8:82000001, elapsed 90.9s, est remaining 111.1s, peak mem 11250MB, user 2683.5s, sys 14.0s, output queue size 204
progress 50% @chr9:102000001, elapsed 100.5s, est remaining 100.5s, peak mem 11262MB, user 2941.6s, sys 14.6s, output queue size 366
progress 55% @chr10:104000001, elapsed 112.3s, est remaining 91.8s, peak mem 11486MB, user 3262.4s, sys 15.7s, output queue size 527
progress 60% @chr11:65000001, elapsed 123.3s, est remaining 82.2s, peak mem 11486MB, user 3642.2s, sys 16.9s, output queue size 510
progress 65% @chr13:35000001, elapsed 134.1s, est remaining 72.2s, peak mem 11512MB, user 3947.3s, sys 17.8s, output queue size 672
progress 70% @chr14:85000001, elapsed 141.0s, est remaining 60.4s, peak mem 11529MB, user 4157.2s, sys 18.6s, output queue size 833
progress 75% @chr16:42000001, elapsed 154.2s, est remaining 51.4s, peak mem 11597MB, user 4616.9s, sys 20.1s, output queue size 461
progress 80% @chr18:10000001, elapsed 172.5s, est remaining 43.1s, peak mem 11669MB, user 5105.6s, sys 21.4s, output queue size 623
progress 85% @chr19:45000001, elapsed 189.3s, est remaining 33.4s, peak mem 11669MB, user 5644.1s, sys 23.0s, output queue size 785
progress 90% @chrX:36000001, elapsed 199.1s, est remaining 22.1s, peak mem 11758MB, user 6022.9s, sys 24.2s, output queue size 513
progress 95% @chrY:55000001, elapsed 204.4s, est remaining 10.8s, peak mem 11939MB, user 6151.3s, sys 24.8s, output queue size 675
progress 100% @chr22:23000001, elapsed 232.4s, est remaining 0.0s, peak mem 11939MB, user 6454.8s, sys 25.7s, output queue size 3635
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: INTEL(R) XEON(R) PLATINUM 8559C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 74522953788
reads: 1364658919
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1242.254 user 22.753 sys 1263.374 real
done: 1 calls 0.081 user 0.009 sys 0.096 real
exec_no_coor: 1 calls 0.019 user 0.000 sys 0.025 real
execute: 1 calls 0.004 user 0.003 sys 232.595 real
idle: 795 calls 0.158 user 0.001 sys 762.224 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 12519010304 mem 6457.190 user 26.189 sys 234.121 real