Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/b2ef13ddd77b0a8e407e2d4ffda592/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fe/ece903b533b8d22cb85187a550da2b/1029_BICJ-T1-TDNA-1_A23MHWWLT4_1/1029_BICJ-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/BWAIndex Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/b2ef13ddd77b0a8e407e2d4ffda592/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fe/ece903b533b8d22cb85187a550da2b/1029_BICJ-T1-TDNA-1_A23MHWWLT4_1/1029_BICJ-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz ==> STAGING COMPLETE (7 inputs) This software is licensed to bgold@natera.com by Sentieon Inc. cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o 1029_BICJ-T1-TDNA-1_A23MHWWLT4_1.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. version: sentieon-genomics-202308.03 [M::bwa_idx_load_from_disk] read 3171 ALT contigs [M::main_mem] bwa index loaded in 1613.713 CPU sec, 55.708 real sec [M::process] read 726142 sequences (100000063 bp) in 1.376 CPU sec, 1.380 real sec... [M::process] read 725396 sequences (100000263 bp) in 2.070 CPU sec, 2.073 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (85, 286742, 65, 92) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 407, 821) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2083) [M::mem_pestat] mean and std.dev: (564.35, 450.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2714) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 181, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 505) [M::mem_pestat] mean and std.dev: (199.67, 91.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 630) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (152, 441, 922) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2462) [M::mem_pestat] mean and std.dev: (482.23, 475.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3232) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (250, 522, 1388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3664) [M::mem_pestat] mean and std.dev: (742.69, 623.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4802) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 724442 sequences (100000030 bp) in 2.090 CPU sec, 2.093 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 287232, 77, 117) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 319, 718) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1770) [M::mem_pestat] mean and std.dev: (413.56, 359.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2296) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 182, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 517) [M::mem_pestat] mean and std.dev: (201.90, 93.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 646) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (231, 477, 1278) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3372) [M::mem_pestat] mean and std.dev: (708.10, 743.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4419) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 531, 981) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2459) [M::mem_pestat] mean and std.dev: (572.70, 485.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3198) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723974 sequences (100000039 bp) in 2.030 CPU sec, 2.030 real sec... [M::mem_process_seqs] Processed 726142 reads in 221.492 CPU sec, 6.953 real sec [M::mem_process_seqs] Processed 725396 reads in 160.467 CPU sec, 5.068 real sec sorting block 0, #reads = 1076332 mem = 536881943 peak = 613658624 [M::process] read 724088 sequences (100000299 bp) in 2.161 CPU sec, 2.186 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (98, 287187, 58, 105) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (244, 532, 1340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3532) [M::mem_pestat] mean and std.dev: (785.34, 708.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4628) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 521) [M::mem_pestat] mean and std.dev: (203.34, 94.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (179, 388, 826) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2120) [M::mem_pestat] mean and std.dev: (477.37, 481.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2767) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 320, 769) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1921) [M::mem_pestat] mean and std.dev: (460.60, 404.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2497) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723158 sequences (100000038 bp) in 1.640 CPU sec, 1.641 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (94, 287103, 82, 95) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 383, 723) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1705) [M::mem_pestat] mean and std.dev: (478.29, 334.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2196) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 524) [M::mem_pestat] mean and std.dev: (204.50, 95.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 655) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (465, 1091, 2060) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5250) [M::mem_pestat] mean and std.dev: (1173.31, 1010.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6845) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (269, 552, 1259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3239) [M::mem_pestat] mean and std.dev: (724.08, 608.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4229) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724442 reads in 215.350 CPU sec, 6.848 real sec sorting block 1, #reads = 1077114 mem = 536879923 peak = 774639616 [M::mem_process_seqs] Processed 723974 reads in 250.456 CPU sec, 7.979 real sec [M::process] read 723242 sequences (100000144 bp) in 2.667 CPU sec, 2.685 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (92, 287165, 65, 115) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (248, 604, 1877) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5135) [M::mem_pestat] mean and std.dev: (963.56, 921.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6764) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 527) [M::mem_pestat] mean and std.dev: (204.23, 95.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 659) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (60, 317, 973) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2799) [M::mem_pestat] mean and std.dev: (566.05, 655.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3712) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 401, 788) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1910) [M::mem_pestat] mean and std.dev: (482.94, 385.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2471) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 725440 sequences (100000030 bp) in 2.160 CPU sec, 2.160 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (101, 286651, 64, 123) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 287, 605) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1433) [M::mem_pestat] mean and std.dev: (361.17, 258.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1847) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 528) [M::mem_pestat] mean and std.dev: (205.55, 96.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 660) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (325, 703, 1523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3919) [M::mem_pestat] mean and std.dev: (820.41, 764.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5117) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 418, 1172) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3076) [M::mem_pestat] mean and std.dev: (659.56, 628.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4028) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724088 reads in 219.656 CPU sec, 6.954 real sec sorting block 2, #reads = 1077876 mem = 536879139 peak = 875892736 [M::mem_process_seqs] Processed 723158 reads in 256.221 CPU sec, 8.136 real sec sorting block 3, #reads = 1078011 mem = 536881138 peak = 875892736 [M::process] read 725350 sequences (100000204 bp) in 2.927 CPU sec, 2.955 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (77, 286743, 82, 129) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 310, 844) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2154) [M::mem_pestat] mean and std.dev: (510.00, 457.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2809) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 531) [M::mem_pestat] mean and std.dev: (206.16, 97.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 664) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (242, 454, 924) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2288) [M::mem_pestat] mean and std.dev: (490.21, 450.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2970) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 467, 1072) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2766) [M::mem_pestat] mean and std.dev: (702.05, 655.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3613) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 724598 sequences (100000045 bp) in 2.275 CPU sec, 2.283 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 287350, 73, 105) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 507, 1220) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3276) [M::mem_pestat] mean and std.dev: (736.96, 714.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4304) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 182, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 520) [M::mem_pestat] mean and std.dev: (202.61, 95.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 650) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (195, 795, 1531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4203) [M::mem_pestat] mean and std.dev: (780.36, 747.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5539) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (276, 476, 1604) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4260) [M::mem_pestat] mean and std.dev: (884.03, 932.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5588) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723242 reads in 220.338 CPU sec, 6.967 real sec [M::mem_process_seqs] Processed 725440 reads in 257.349 CPU sec, 8.171 real sec sorting block 4, #reads = 1079414 mem = 536881274 peak = 875892736 [M::process] read 724208 sequences (100000028 bp) in 2.778 CPU sec, 2.801 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (95, 286965, 77, 86) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 629, 1091) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2911) [M::mem_pestat] mean and std.dev: (586.05, 492.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3821) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 182, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 520) [M::mem_pestat] mean and std.dev: (202.62, 94.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 650) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (249, 529, 1118) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2856) [M::mem_pestat] mean and std.dev: (564.90, 520.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3725) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (272, 535, 845) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1991) [M::mem_pestat] mean and std.dev: (569.83, 387.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2564) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723580 sequences (100000000 bp) in 2.219 CPU sec, 2.216 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (93, 286897, 63, 101) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 403, 1291) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3457) [M::mem_pestat] mean and std.dev: (647.58, 708.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4540) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 521) [M::mem_pestat] mean and std.dev: (203.57, 94.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (140, 546, 1389) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3887) [M::mem_pestat] mean and std.dev: (839.05, 813.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5136) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 548, 1331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3611) [M::mem_pestat] mean and std.dev: (600.84, 622.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4751) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (79, 287055, 79, 104) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (250, 494, 1092) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2776) [M::mem_pestat] mean and std.dev: (719.89, 625.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3618) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 521) [M::mem_pestat] mean and std.dev: (203.38, 95.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (275, 482, 1122) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2816) [M::mem_pestat] mean and std.dev: (707.96, 617.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3663) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 441, 1109) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2889) [M::mem_pestat] mean and std.dev: (588.55, 564.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3779) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725350 reads in 311.267 CPU sec, 9.903 real sec sorting block 5, #reads = 1077898 mem = 536878882 peak = 875892736 [M::mem_process_seqs] Processed 724208 reads in 251.149 CPU sec, 8.035 real sec [M::mem_process_seqs] Processed 724598 reads in 289.621 CPU sec, 9.257 real sec sorting block 6, #reads = 1076793 mem = 536877918 peak = 875892736 [M::process] read 723526 sequences (100000171 bp) in 3.343 CPU sec, 3.409 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (105, 286739, 80, 123) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (257, 537, 1290) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3356) [M::mem_pestat] mean and std.dev: (769.16, 753.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4389) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 525) [M::mem_pestat] mean and std.dev: (204.61, 95.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 656) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (212, 653, 1170) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3086) [M::mem_pestat] mean and std.dev: (658.92, 494.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4044) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (253, 471, 800) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1894) [M::mem_pestat] mean and std.dev: (479.25, 327.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2441) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723724 sequences (100000109 bp) in 2.687 CPU sec, 2.704 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (107, 285840, 81, 112) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (257, 527, 1166) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2984) [M::mem_pestat] mean and std.dev: (685.31, 573.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3893) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (203.91, 94.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 652) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (175, 492, 1388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3814) [M::mem_pestat] mean and std.dev: (497.34, 511.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5027) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (239, 504, 1397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3713) [M::mem_pestat] mean and std.dev: (813.77, 792.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4871) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 724252 sequences (100000010 bp) in 2.360 CPU sec, 2.356 real sec... [M::mem_process_seqs] Processed 723580 reads in 227.695 CPU sec, 7.181 real sec sorting block 7, #reads = 1078301 mem = 536876696 peak = 875892736 [M::mem_process_seqs] Processed 723526 reads in 164.274 CPU sec, 5.186 real sec [M::process] read 722804 sequences (100000142 bp) in 2.970 CPU sec, 3.017 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (102, 286300, 71, 100) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 494, 981) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2571) [M::mem_pestat] mean and std.dev: (584.43, 537.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3366) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 516) [M::mem_pestat] mean and std.dev: (203.17, 93.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (201, 701, 1074) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2820) [M::mem_pestat] mean and std.dev: (616.48, 489.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3693) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (273, 544, 1592) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4230) [M::mem_pestat] mean and std.dev: (763.68, 776.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5549) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 722178 sequences (100000149 bp) in 1.850 CPU sec, 1.842 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (102, 285945, 74, 108) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 391, 1096) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2876) [M::mem_pestat] mean and std.dev: (564.12, 526.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3766) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 518) [M::mem_pestat] mean and std.dev: (202.71, 93.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 647) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (205, 504, 1080) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2830) [M::mem_pestat] mean and std.dev: (648.62, 566.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3705) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 506, 1111) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2821) [M::mem_pestat] mean and std.dev: (587.52, 491.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3676) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723724 reads in 232.357 CPU sec, 7.375 real sec sorting block 8, #reads = 1077238 mem = 536881082 peak = 879423488 [M::mem_process_seqs] Processed 724252 reads in 273.887 CPU sec, 8.727 real sec sorting block 9, #reads = 1071997 mem = 536881416 peak = 929910784 [M::process] read 722528 sequences (100000065 bp) in 2.865 CPU sec, 2.895 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (105, 285983, 66, 97) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 342, 886) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2276) [M::mem_pestat] mean and std.dev: (587.25, 543.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2971) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (203.94, 93.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 652) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (168, 563, 1441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3987) [M::mem_pestat] mean and std.dev: (827.30, 907.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5260) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 484, 920) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2380) [M::mem_pestat] mean and std.dev: (597.42, 539.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3110) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 721924 sequences (100000178 bp) in 2.431 CPU sec, 2.432 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (99, 285899, 71, 120) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 408, 1298) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3506) [M::mem_pestat] mean and std.dev: (624.51, 643.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4610) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (204.07, 93.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (256, 485, 1087) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2749) [M::mem_pestat] mean and std.dev: (675.83, 618.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3580) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 555, 1271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3425) [M::mem_pestat] mean and std.dev: (735.80, 757.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4502) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722804 reads in 224.438 CPU sec, 7.094 real sec [M::process] read 721504 sequences (100000204 bp) in 2.677 CPU sec, 2.685 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (119, 285774, 48, 89) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 381, 899) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2297) [M::mem_pestat] mean and std.dev: (565.23, 525.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2996) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 186, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 526) [M::mem_pestat] mean and std.dev: (205.30, 94.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 657) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (131, 375, 990) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2708) [M::mem_pestat] mean and std.dev: (466.91, 499.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3567) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 391, 816) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1980) [M::mem_pestat] mean and std.dev: (532.17, 462.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2562) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 721924 reads in 138.894 CPU sec, 4.405 real sec sorting block 10, #reads = 1076294 mem = 536880067 peak = 929910784 [M::mem_process_seqs] Processed 722178 reads in 435.817 CPU sec, 13.842 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (103, 286010, 79, 87) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (263, 543, 1091) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2747) [M::mem_pestat] mean and std.dev: (680.22, 531.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3575) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 186, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (204.59, 94.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 652) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (144, 357, 1338) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3726) [M::mem_pestat] mean and std.dev: (650.50, 804.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4920) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 380, 1392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3784) [M::mem_pestat] mean and std.dev: (723.82, 746.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4980) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 11, #reads = 1075123 mem = 536882091 peak = 1007742976 [M::process] read 721000 sequences (100000177 bp) in 2.973 CPU sec, 3.215 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (140, 285686, 79, 106) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 297, 783) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1975) [M::mem_pestat] mean and std.dev: (500.76, 459.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2571) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 187, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 526) [M::mem_pestat] mean and std.dev: (205.66, 94.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 657) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (251, 765, 1478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3932) [M::mem_pestat] mean and std.dev: (838.14, 652.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5159) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 525, 1112) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2900) [M::mem_pestat] mean and std.dev: (743.00, 715.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3794) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 722952 sequences (100000087 bp) in 2.460 CPU sec, 2.456 real sec... [M::mem_process_seqs] Processed 722528 reads in 354.415 CPU sec, 11.205 real sec [M::mem_process_seqs] Processed 721504 reads in 165.639 CPU sec, 5.233 real sec sorting block 12, #reads = 1075200 mem = 536880843 peak = 1007742976 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (103, 285529, 47, 94) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (216, 316, 807) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1989) [M::mem_pestat] mean and std.dev: (517.44, 467.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2580) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (134, 187, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 527) [M::mem_pestat] mean and std.dev: (206.13, 94.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 658) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (164, 404, 1573) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4391) [M::mem_pestat] mean and std.dev: (803.42, 850.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5800) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 336, 824) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2084) [M::mem_pestat] mean and std.dev: (433.58, 350.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2714) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 724876 sequences (100000081 bp) in 3.134 CPU sec, 3.198 real sec... [M::process] read 724666 sequences (100000208 bp) in 2.450 CPU sec, 2.442 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (119, 286006, 54, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (219, 348, 902) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2268) [M::mem_pestat] mean and std.dev: (517.54, 443.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2951) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (204.38, 94.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 652) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (118, 565, 1239) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3481) [M::mem_pestat] mean and std.dev: (744.16, 825.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4602) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (267, 702, 1252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3222) [M::mem_pestat] mean and std.dev: (818.39, 698.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4207) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 721000 reads in 225.302 CPU sec, 7.133 real sec sorting block 13, #reads = 1074661 mem = 536876478 peak = 1007742976 [M::mem_process_seqs] Processed 722952 reads in 174.380 CPU sec, 5.549 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (117, 287433, 60, 86) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 331, 829) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2057) [M::mem_pestat] mean and std.dev: (488.26, 400.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2671) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 521) [M::mem_pestat] mean and std.dev: (203.22, 95.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (138, 536, 1381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3867) [M::mem_pestat] mean and std.dev: (608.46, 722.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5110) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 388, 1327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3535) [M::mem_pestat] mean and std.dev: (619.74, 593.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4639) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 724206 sequences (100000254 bp) in 3.404 CPU sec, 3.442 real sec... [M::process] read 724120 sequences (100000151 bp) in 2.450 CPU sec, 2.453 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (92, 286655, 78, 90) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 363, 690) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1688) [M::mem_pestat] mean and std.dev: (406.43, 335.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2187) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 183, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 514) [M::mem_pestat] mean and std.dev: (201.97, 93.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 642) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (323, 631, 1422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3620) [M::mem_pestat] mean and std.dev: (771.15, 713.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4719) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (286, 415, 943) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2257) [M::mem_pestat] mean and std.dev: (541.57, 414.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2914) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724666 reads in 222.625 CPU sec, 7.031 real sec sorting block 14, #reads = 1075627 mem = 536880141 peak = 1007742976 [M::mem_process_seqs] Processed 724876 reads in 259.135 CPU sec, 8.217 real sec sorting block 15, #reads = 1078948 mem = 536880007 peak = 1023258624 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (128, 287110, 61, 98) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (234, 392, 1011) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2565) [M::mem_pestat] mean and std.dev: (628.95, 530.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3342) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 524) [M::mem_pestat] mean and std.dev: (204.20, 95.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 655) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (183, 553, 1370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3744) [M::mem_pestat] mean and std.dev: (764.64, 807.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4931) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (276, 493, 1136) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2856) [M::mem_pestat] mean and std.dev: (709.21, 682.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3716) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723480 sequences (100000145 bp) in 3.421 CPU sec, 3.480 real sec... [M::process] read 723048 sequences (100000277 bp) in 1.940 CPU sec, 1.941 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (91, 286712, 65, 98) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 501, 1014) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2670) [M::mem_pestat] mean and std.dev: (644.76, 574.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3498) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 521) [M::mem_pestat] mean and std.dev: (203.39, 95.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (248, 705, 1058) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2678) [M::mem_pestat] mean and std.dev: (549.42, 421.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3488) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (297, 506, 1239) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3123) [M::mem_pestat] mean and std.dev: (692.90, 671.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4065) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724120 reads in 224.775 CPU sec, 7.126 real sec [M::mem_process_seqs] Processed 724206 reads in 266.815 CPU sec, 8.484 real sec sorting block 16, #reads = 1077861 mem = 536879171 peak = 1023258624 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (103, 287240, 65, 122) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 517, 1270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3416) [M::mem_pestat] mean and std.dev: (703.09, 695.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4489) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 528) [M::mem_pestat] mean and std.dev: (205.62, 96.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 660) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (214, 765, 1341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3595) [M::mem_pestat] mean and std.dev: (834.15, 835.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4722) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 466, 933) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2319) [M::mem_pestat] mean and std.dev: (598.84, 497.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3012) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723614 sequences (100000248 bp) in 3.529 CPU sec, 3.574 real sec... [M::process] read 725036 sequences (100000190 bp) in 2.070 CPU sec, 2.072 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (104, 286880, 84, 117) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 297, 883) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2285) [M::mem_pestat] mean and std.dev: (529.74, 485.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2986) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 531) [M::mem_pestat] mean and std.dev: (206.33, 97.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 664) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (240, 635, 1283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3369) [M::mem_pestat] mean and std.dev: (749.56, 666.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4412) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 353, 951) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2407) [M::mem_pestat] mean and std.dev: (508.42, 478.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3135) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723480 reads in 220.613 CPU sec, 6.974 real sec sorting block 17, #reads = 1078261 mem = 536878983 peak = 1023258624 [M::mem_process_seqs] Processed 723048 reads in 256.514 CPU sec, 8.140 real sec sorting block 18, #reads = 1079349 mem = 536886036 peak = 1023258624 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (102, 286689, 58, 104) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (240, 432, 1007) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2541) [M::mem_pestat] mean and std.dev: (594.14, 494.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3308) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 531) [M::mem_pestat] mean and std.dev: (206.11, 97.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 664) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (264, 669, 1135) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2877) [M::mem_pestat] mean and std.dev: (637.22, 559.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3748) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 435, 750) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1796) [M::mem_pestat] mean and std.dev: (439.76, 351.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2319) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 724100 sequences (100000047 bp) in 3.576 CPU sec, 3.627 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (88, 287680, 88, 100) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (239, 492, 1215) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3167) [M::mem_pestat] mean and std.dev: (730.19, 661.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4143) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 518) [M::mem_pestat] mean and std.dev: (202.64, 94.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 647) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (565, 1154, 3365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8965) [M::mem_pestat] mean and std.dev: (1946.34, 2008.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11765) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (267, 633, 1297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3357) [M::mem_pestat] mean and std.dev: (666.40, 611.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4387) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723810 sequences (100000259 bp) in 2.460 CPU sec, 2.462 real sec... [M::mem_process_seqs] Processed 723614 reads in 219.884 CPU sec, 6.941 real sec [M::mem_process_seqs] Processed 725036 reads in 255.264 CPU sec, 8.087 real sec sorting block 19, #reads = 1078395 mem = 536883456 peak = 1023258624 [M::process] read 723996 sequences (100000206 bp) in 3.082 CPU sec, 3.117 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (106, 287052, 83, 91) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (251, 404, 989) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2465) [M::mem_pestat] mean and std.dev: (567.30, 488.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3203) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 524) [M::mem_pestat] mean and std.dev: (204.20, 95.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 655) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (279, 514, 1353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3501) [M::mem_pestat] mean and std.dev: (700.01, 672.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4575) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 347, 1071) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2811) [M::mem_pestat] mean and std.dev: (510.06, 453.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3681) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723750 sequences (100000259 bp) in 2.000 CPU sec, 2.008 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (88, 286725, 66, 90) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 519, 939) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2459) [M::mem_pestat] mean and std.dev: (669.63, 594.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3219) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 521) [M::mem_pestat] mean and std.dev: (203.76, 94.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (198, 680, 987) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2565) [M::mem_pestat] mean and std.dev: (640.67, 533.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3354) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 420, 1034) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2700) [M::mem_pestat] mean and std.dev: (566.51, 484.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3533) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724100 reads in 221.733 CPU sec, 7.036 real sec sorting block 20, #reads = 1079582 mem = 536877070 peak = 1023258624 [M::mem_process_seqs] Processed 723810 reads in 261.603 CPU sec, 8.327 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (83, 286310, 65, 112) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 382, 1287) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3443) [M::mem_pestat] mean and std.dev: (708.15, 708.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4521) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (203.76, 94.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (109, 419, 1028) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2866) [M::mem_pestat] mean and std.dev: (599.41, 606.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3785) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 455, 1279) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3379) [M::mem_pestat] mean and std.dev: (718.97, 729.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4429) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723700 sequences (100000167 bp) in 3.354 CPU sec, 3.410 real sec... [M::process] read 726108 sequences (100000300 bp) in 2.530 CPU sec, 2.529 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (93, 286409, 59, 93) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 374, 1067) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2821) [M::mem_pestat] mean and std.dev: (587.32, 560.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3698) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 521) [M::mem_pestat] mean and std.dev: (203.28, 94.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (283, 672, 1328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3418) [M::mem_pestat] mean and std.dev: (828.85, 804.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4463) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 402, 1401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3723) [M::mem_pestat] mean and std.dev: (761.02, 723.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4884) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723996 reads in 222.531 CPU sec, 7.020 real sec sorting block 21, #reads = 1078511 mem = 536882505 peak = 1023258624 [M::mem_process_seqs] Processed 723750 reads in 258.481 CPU sec, 8.188 real sec sorting block 22, #reads = 1076223 mem = 536876543 peak = 1023258624 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 286148, 70, 88) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 496, 1078) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2814) [M::mem_pestat] mean and std.dev: (699.16, 641.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3682) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 515) [M::mem_pestat] mean and std.dev: (202.33, 93.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 643) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (244, 585, 1179) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3049) [M::mem_pestat] mean and std.dev: (644.38, 591.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3984) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 393, 1061) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2719) [M::mem_pestat] mean and std.dev: (600.84, 580.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3548) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723746 sequences (100000292 bp) in 3.551 CPU sec, 3.583 real sec... [M::process] read 722914 sequences (100000176 bp) in 2.500 CPU sec, 2.500 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (77, 287239, 62, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (229, 440, 1241) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3265) [M::mem_pestat] mean and std.dev: (648.16, 591.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4277) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 181, 256) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 508) [M::mem_pestat] mean and std.dev: (200.25, 92.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 634) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (98, 376, 588) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1568) [M::mem_pestat] mean and std.dev: (345.09, 286.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2058) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (257, 568, 1919) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5243) [M::mem_pestat] mean and std.dev: (1138.60, 1268.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6905) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723700 reads in 233.891 CPU sec, 7.389 real sec [M::process] read 723050 sequences (100000005 bp) in 2.956 CPU sec, 2.964 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (107, 286572, 71, 89) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (257, 363, 814) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1928) [M::mem_pestat] mean and std.dev: (459.41, 346.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2485) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 518) [M::mem_pestat] mean and std.dev: (202.92, 93.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 647) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (100, 523, 1507) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4321) [M::mem_pestat] mean and std.dev: (823.05, 1045.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5728) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 357, 1146) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3026) [M::mem_pestat] mean and std.dev: (703.95, 738.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3966) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723746 reads in 125.564 CPU sec, 3.976 real sec sorting block 23, #reads = 1077143 mem = 536879784 peak = 1023258624 [M::mem_process_seqs] Processed 726108 reads in 335.996 CPU sec, 10.677 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 286789, 67, 97) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (236, 578, 1261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3311) [M::mem_pestat] mean and std.dev: (706.24, 622.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4336) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (203.91, 94.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (215, 697, 1899) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5267) [M::mem_pestat] mean and std.dev: (1094.56, 1204.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6951) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 328, 819) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2013) [M::mem_pestat] mean and std.dev: (451.55, 394.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2610) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 24, #reads = 1074656 mem = 536880013 peak = 1023258624 [M::process] read 722012 sequences (100000091 bp) in 3.606 CPU sec, 3.671 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (96, 286362, 67, 109) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 328, 864) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2204) [M::mem_pestat] mean and std.dev: (498.44, 462.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2874) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (203.53, 93.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (181, 524, 1509) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4165) [M::mem_pestat] mean and std.dev: (855.59, 917.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5493) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 380, 930) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2388) [M::mem_pestat] mean and std.dev: (567.66, 510.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3117) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722914 reads in 349.588 CPU sec, 11.051 real sec [M::process] read 722258 sequences (100000023 bp) in 2.432 CPU sec, 2.443 real sec... [M::process] read 721896 sequences (100000015 bp) in 2.704 CPU sec, 2.710 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (107, 285731, 79, 108) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (297, 514, 923) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2175) [M::mem_pestat] mean and std.dev: (576.18, 429.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2801) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 187, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 520) [M::mem_pestat] mean and std.dev: (205.05, 94.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 649) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (128, 298, 968) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2648) [M::mem_pestat] mean and std.dev: (335.46, 295.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3488) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 393, 1031) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2635) [M::mem_pestat] mean and std.dev: (634.59, 582.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3437) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722012 reads in 127.349 CPU sec, 4.029 real sec sorting block 25, #reads = 1076891 mem = 536880757 peak = 1023258624 [M::mem_process_seqs] Processed 723050 reads in 328.191 CPU sec, 10.386 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (89, 285959, 61, 112) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 301, 826) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2148) [M::mem_pestat] mean and std.dev: (474.12, 445.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2809) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 186, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 526) [M::mem_pestat] mean and std.dev: (205.40, 94.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 657) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (141, 513, 1054) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2880) [M::mem_pestat] mean and std.dev: (491.59, 416.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3793) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 395, 965) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2441) [M::mem_pestat] mean and std.dev: (560.30, 523.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3179) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 26, #reads = 1076816 mem = 536882503 peak = 1029763072 [M::process] read 721770 sequences (100000260 bp) in 3.591 CPU sec, 3.653 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (110, 285789, 68, 101) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (236, 404, 1216) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3176) [M::mem_pestat] mean and std.dev: (634.66, 668.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4156) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 187, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 529) [M::mem_pestat] mean and std.dev: (206.08, 95.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 661) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (221, 659, 1268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3362) [M::mem_pestat] mean and std.dev: (796.29, 725.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4409) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (260, 520, 1144) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2912) [M::mem_pestat] mean and std.dev: (683.12, 575.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3796) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 725952 sequences (100000172 bp) in 2.260 CPU sec, 2.258 real sec... [M::mem_process_seqs] Processed 722258 reads in 354.784 CPU sec, 11.227 real sec [M::mem_process_seqs] Processed 721896 reads in 169.090 CPU sec, 5.355 real sec sorting block 27, #reads = 1075475 mem = 536885023 peak = 1029763072 [M::process] read 724808 sequences (100000227 bp) in 2.951 CPU sec, 3.015 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (97, 286044, 48, 90) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 451, 915) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2325) [M::mem_pestat] mean and std.dev: (544.42, 475.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3030) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 187, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 526) [M::mem_pestat] mean and std.dev: (205.75, 95.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 657) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (283, 666, 983) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2383) [M::mem_pestat] mean and std.dev: (671.36, 540.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3083) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (244, 413, 825) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1987) [M::mem_pestat] mean and std.dev: (497.15, 352.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2568) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 721770 reads in 134.494 CPU sec, 4.308 real sec sorting block 28, #reads = 1076316 mem = 536885384 peak = 1029763072 [M::process] read 723270 sequences (100000218 bp) in 2.862 CPU sec, 2.898 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (91, 287081, 56, 114) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 335, 1014) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2642) [M::mem_pestat] mean and std.dev: (569.65, 587.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3456) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 181, 257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 511) [M::mem_pestat] mean and std.dev: (200.74, 92.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 638) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (239, 637, 1084) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2774) [M::mem_pestat] mean and std.dev: (671.31, 589.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3619) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 405, 896) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2268) [M::mem_pestat] mean and std.dev: (556.48, 507.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2954) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723190 sequences (100000033 bp) in 2.598 CPU sec, 2.608 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (77, 286465, 66, 98) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 419, 833) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2165) [M::mem_pestat] mean and std.dev: (513.92, 407.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2831) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 525) [M::mem_pestat] mean and std.dev: (204.62, 95.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 656) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (205, 523, 1063) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2779) [M::mem_pestat] mean and std.dev: (585.02, 511.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3637) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 378, 1003) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2633) [M::mem_pestat] mean and std.dev: (588.01, 534.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3448) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (109, 287143, 61, 98) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 343, 789) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1945) [M::mem_pestat] mean and std.dev: (447.23, 367.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2523) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 518) [M::mem_pestat] mean and std.dev: (202.54, 94.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 647) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (233, 757, 1449) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3881) [M::mem_pestat] mean and std.dev: (839.43, 741.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5097) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (301, 489, 1514) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3940) [M::mem_pestat] mean and std.dev: (790.04, 692.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5153) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725952 reads in 353.312 CPU sec, 11.316 real sec [M::mem_process_seqs] Processed 723270 reads in 253.088 CPU sec, 8.127 real sec sorting block 29, #reads = 1076703 mem = 536880500 peak = 1029763072 [M::process] read 722726 sequences (100000090 bp) in 3.360 CPU sec, 3.426 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (97, 286748, 89, 95) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 484, 1440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3914) [M::mem_pestat] mean and std.dev: (728.02, 844.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5151) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 186, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 531) [M::mem_pestat] mean and std.dev: (205.99, 96.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 664) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (200, 992, 2295) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6485) [M::mem_pestat] mean and std.dev: (1355.41, 1499.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8580) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 306, 677) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1627) [M::mem_pestat] mean and std.dev: (420.61, 335.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2102) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723190 reads in 133.248 CPU sec, 4.190 real sec [M::process] read 721980 sequences (100000164 bp) in 2.300 CPU sec, 2.293 real sec... sorting block 30, #reads = 1077279 mem = 536884367 peak = 1029763072 [M::mem_process_seqs] Processed 724808 reads in 462.157 CPU sec, 14.747 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (115, 286874, 83, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (229, 441, 1422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3808) [M::mem_pestat] mean and std.dev: (762.00, 748.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5001) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 186, 267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 537) [M::mem_pestat] mean and std.dev: (207.34, 98.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 672) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (146, 486, 956) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2576) [M::mem_pestat] mean and std.dev: (512.17, 508.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3386) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (322, 611, 981) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2299) [M::mem_pestat] mean and std.dev: (636.28, 422.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2958) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 722618 sequences (100000296 bp) in 3.212 CPU sec, 3.397 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (94, 286634, 92, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (235, 524, 1314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3472) [M::mem_pestat] mean and std.dev: (650.75, 600.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4551) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 187, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 538) [M::mem_pestat] mean and std.dev: (208.53, 98.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 673) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (89, 200, 742) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2048) [M::mem_pestat] mean and std.dev: (359.89, 406.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2701) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (237, 601, 1349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3573) [M::mem_pestat] mean and std.dev: (867.52, 871.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4685) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 724620 sequences (100000061 bp) in 2.280 CPU sec, 2.281 real sec... [M::mem_process_seqs] Processed 722726 reads in 262.592 CPU sec, 8.284 real sec sorting block 31, #reads = 1077977 mem = 536885953 peak = 1029763072 [M::mem_process_seqs] Processed 721980 reads in 165.469 CPU sec, 5.233 real sec sorting block 32, #reads = 1077642 mem = 536879598 peak = 1074700288 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (112, 286617, 58, 97) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 556, 1046) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2720) [M::mem_pestat] mean and std.dev: (692.23, 637.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3557) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 187, 267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 537) [M::mem_pestat] mean and std.dev: (207.90, 98.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 672) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (168, 609, 1055) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2829) [M::mem_pestat] mean and std.dev: (605.91, 467.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3716) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 437, 1527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4179) [M::mem_pestat] mean and std.dev: (769.40, 841.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5505) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 724490 sequences (100000051 bp) in 3.325 CPU sec, 3.363 real sec... [M::process] read 723090 sequences (100000059 bp) in 1.968 CPU sec, 1.972 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (96, 286993, 100, 103) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 383, 860) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2188) [M::mem_pestat] mean and std.dev: (530.44, 420.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2852) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 521) [M::mem_pestat] mean and std.dev: (203.45, 95.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (166, 652, 1340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3688) [M::mem_pestat] mean and std.dev: (747.47, 772.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4862) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (245, 524, 985) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2465) [M::mem_pestat] mean and std.dev: (635.02, 529.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3205) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722618 reads in 224.870 CPU sec, 7.125 real sec [M::mem_process_seqs] Processed 724620 reads in 163.155 CPU sec, 5.198 real sec sorting block 33, #reads = 1077682 mem = 536881234 peak = 1074700288 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (92, 287360, 62, 88) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (280, 428, 945) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2275) [M::mem_pestat] mean and std.dev: (593.13, 492.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2940) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 521) [M::mem_pestat] mean and std.dev: (203.27, 94.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 651) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (275, 659, 1002) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2456) [M::mem_pestat] mean and std.dev: (593.21, 374.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3183) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 343, 921) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2251) [M::mem_pestat] mean and std.dev: (571.94, 508.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2916) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723112 sequences (100000070 bp) in 3.342 CPU sec, 3.387 real sec... [M::process] read 723348 sequences (100000138 bp) in 2.490 CPU sec, 2.495 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (119, 286727, 73, 97) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 346, 1030) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2680) [M::mem_pestat] mean and std.dev: (590.36, 572.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3505) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 525) [M::mem_pestat] mean and std.dev: (204.97, 95.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 656) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (501, 1009, 2113) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5337) [M::mem_pestat] mean and std.dev: (1058.15, 838.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6949) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 390, 824) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1980) [M::mem_pestat] mean and std.dev: (443.69, 347.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2558) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724490 reads in 224.463 CPU sec, 7.096 real sec sorting block 34, #reads = 1078363 mem = 536879123 peak = 1074700288 [M::process] read 723072 sequences (100000136 bp) in 2.866 CPU sec, 2.871 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (102, 286377, 74, 92) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (248, 516, 1372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3620) [M::mem_pestat] mean and std.dev: (747.45, 777.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4744) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 516) [M::mem_pestat] mean and std.dev: (203.20, 93.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (281, 792, 1528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4022) [M::mem_pestat] mean and std.dev: (830.89, 718.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5269) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 562, 1043) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2679) [M::mem_pestat] mean and std.dev: (605.48, 501.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3497) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723348 reads in 142.013 CPU sec, 4.500 real sec sorting block 35, #reads = 1077752 mem = 536879978 peak = 1074700288 [M::mem_process_seqs] Processed 723090 reads in 345.284 CPU sec, 10.966 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (108, 285953, 73, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 368, 848) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2126) [M::mem_pestat] mean and std.dev: (500.84, 450.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2765) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (204.17, 94.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 652) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (253, 533, 1107) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2815) [M::mem_pestat] mean and std.dev: (681.77, 602.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3669) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 383, 885) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2227) [M::mem_pestat] mean and std.dev: (500.84, 411.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2898) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723978 sequences (100000191 bp) in 3.219 CPU sec, 3.490 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (144, 285486, 70, 114) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (243, 345, 832) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2010) [M::mem_pestat] mean and std.dev: (534.01, 453.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2599) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (203.31, 93.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (284, 845, 1288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3296) [M::mem_pestat] mean and std.dev: (803.56, 671.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4300) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (332, 739, 1381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3479) [M::mem_pestat] mean and std.dev: (892.28, 730.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4528) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723272 sequences (100000044 bp) in 2.615 CPU sec, 2.619 real sec... [M::mem_process_seqs] Processed 723112 reads in 378.902 CPU sec, 12.004 real sec sorting block 36, #reads = 1076115 mem = 536889879 peak = 1074700288 [M::mem_process_seqs] Processed 723072 reads in 189.647 CPU sec, 6.022 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (91, 286352, 83, 108) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (238, 400, 804) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1936) [M::mem_pestat] mean and std.dev: (461.88, 381.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2502) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 518) [M::mem_pestat] mean and std.dev: (202.75, 93.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 647) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (207, 524, 1039) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2703) [M::mem_pestat] mean and std.dev: (573.51, 489.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3535) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (262, 568, 976) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2404) [M::mem_pestat] mean and std.dev: (672.24, 525.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3118) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 37, #reads = 1075990 mem = 536878585 peak = 1074700288 [M::process] read 722998 sequences (100000146 bp) in 3.989 CPU sec, 4.096 real sec... [M::process] read 723314 sequences (100000279 bp) in 2.598 CPU sec, 2.599 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (96, 286267, 66, 102) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 510, 1566) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4290) [M::mem_pestat] mean and std.dev: (718.52, 768.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5652) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 516) [M::mem_pestat] mean and std.dev: (202.69, 93.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (164, 545, 938) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2486) [M::mem_pestat] mean and std.dev: (573.10, 586.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3260) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (265, 452, 1061) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2653) [M::mem_pestat] mean and std.dev: (638.15, 539.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3449) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723978 reads in 258.649 CPU sec, 8.221 real sec [M::mem_process_seqs] Processed 723272 reads in 190.199 CPU sec, 6.066 real sec sorting block 38, #reads = 1076156 mem = 536879619 peak = 1074700288 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (78, 286428, 72, 111) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 476, 1005) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2575) [M::mem_pestat] mean and std.dev: (648.96, 549.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3360) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 516) [M::mem_pestat] mean and std.dev: (203.19, 93.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (236, 565, 1202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3134) [M::mem_pestat] mean and std.dev: (708.44, 609.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4100) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 367, 1118) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2966) [M::mem_pestat] mean and std.dev: (647.55, 688.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3890) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 722762 sequences (100000188 bp) in 3.236 CPU sec, 3.289 real sec... [M::process] read 722296 sequences (100000163 bp) in 2.580 CPU sec, 2.583 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (99, 286440, 88, 113) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (228, 401, 1136) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2952) [M::mem_pestat] mean and std.dev: (609.89, 558.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3860) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (203.81, 94.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (150, 579, 1388) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3864) [M::mem_pestat] mean and std.dev: (811.43, 875.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5102) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (288, 551, 1139) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2841) [M::mem_pestat] mean and std.dev: (703.21, 581.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3692) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722998 reads in 243.903 CPU sec, 7.734 real sec sorting block 39, #reads = 1075800 mem = 536880266 peak = 1074700288 [M::mem_process_seqs] Processed 723314 reads in 177.684 CPU sec, 5.643 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 286286, 64, 95) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 338, 1054) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2766) [M::mem_pestat] mean and std.dev: (502.14, 486.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3622) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (204.16, 94.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 652) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (176, 576, 1736) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4856) [M::mem_pestat] mean and std.dev: (878.79, 935.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6416) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 447, 776) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1898) [M::mem_pestat] mean and std.dev: (487.66, 382.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2459) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 722810 sequences (100000051 bp) in 3.666 CPU sec, 3.715 real sec... [M::process] read 722396 sequences (100000286 bp) in 2.310 CPU sec, 2.309 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (86, 285827, 64, 122) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 344, 1058) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2880) [M::mem_pestat] mean and std.dev: (618.61, 628.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3791) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 186, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 520) [M::mem_pestat] mean and std.dev: (204.64, 94.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 649) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (206, 560, 1195) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3173) [M::mem_pestat] mean and std.dev: (657.48, 579.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4162) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 377, 1189) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3055) [M::mem_pestat] mean and std.dev: (670.94, 686.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3988) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722762 reads in 242.622 CPU sec, 7.689 real sec sorting block 40, #reads = 1076691 mem = 536879677 peak = 1074700288 [M::mem_process_seqs] Processed 722296 reads in 179.086 CPU sec, 5.703 real sec sorting block 41, #reads = 1074965 mem = 536881052 peak = 1074700288 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (114, 286511, 67, 94) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 362, 610) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1436) [M::mem_pestat] mean and std.dev: (364.82, 245.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1849) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 186, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (204.62, 94.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 652) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (337, 546, 1154) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2788) [M::mem_pestat] mean and std.dev: (753.32, 641.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3605) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (265, 522, 946) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2308) [M::mem_pestat] mean and std.dev: (606.83, 433.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2989) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723044 sequences (100000238 bp) in 3.023 CPU sec, 3.078 real sec... [M::process] read 724330 sequences (100000030 bp) in 2.250 CPU sec, 2.254 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (100, 286111, 100, 98) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 489, 1124) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3008) [M::mem_pestat] mean and std.dev: (667.03, 632.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3950) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 186, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 525) [M::mem_pestat] mean and std.dev: (204.87, 94.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 656) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (176, 454, 1098) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2942) [M::mem_pestat] mean and std.dev: (587.20, 598.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3864) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (239, 411, 932) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2318) [M::mem_pestat] mean and std.dev: (537.95, 456.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3011) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722810 reads in 242.053 CPU sec, 7.684 real sec [M::mem_process_seqs] Processed 722396 reads in 178.703 CPU sec, 5.693 real sec sorting block 42, #reads = 1078314 mem = 536882903 peak = 1074700288 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (113, 286676, 60, 112) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 353, 970) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2512) [M::mem_pestat] mean and std.dev: (601.12, 569.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3283) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 518) [M::mem_pestat] mean and std.dev: (202.76, 94.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 647) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (146, 314, 890) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2378) [M::mem_pestat] mean and std.dev: (507.59, 563.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3122) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 362, 760) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1800) [M::mem_pestat] mean and std.dev: (483.97, 374.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2320) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723802 sequences (100000192 bp) in 3.529 CPU sec, 3.576 real sec... [M::process] read 723110 sequences (100000275 bp) in 2.510 CPU sec, 2.507 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (118, 286579, 69, 118) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 471, 964) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2462) [M::mem_pestat] mean and std.dev: (553.88, 463.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3211) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (204.01, 94.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 652) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (278, 554, 1561) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4127) [M::mem_pestat] mean and std.dev: (743.22, 723.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5410) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (257, 529, 1122) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2852) [M::mem_pestat] mean and std.dev: (658.42, 568.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3717) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724330 reads in 242.225 CPU sec, 7.670 real sec sorting block 43, #reads = 1078452 mem = 536877817 peak = 1074700288 [M::mem_process_seqs] Processed 723044 reads in 283.291 CPU sec, 9.000 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (109, 286530, 61, 130) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 341, 715) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1783) [M::mem_pestat] mean and std.dev: (363.92, 269.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2317) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 525) [M::mem_pestat] mean and std.dev: (204.97, 95.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 656) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (227, 713, 2045) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5681) [M::mem_pestat] mean and std.dev: (964.42, 925.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7499) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 390, 806) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2012) [M::mem_pestat] mean and std.dev: (533.21, 459.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2615) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 722774 sequences (100000053 bp) in 3.735 CPU sec, 3.814 real sec... [M::process] read 722318 sequences (100000100 bp) in 2.490 CPU sec, 2.493 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (99, 286642, 53, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 579, 1421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3803) [M::mem_pestat] mean and std.dev: (777.84, 749.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4994) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 184, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 524) [M::mem_pestat] mean and std.dev: (204.36, 95.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 655) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (436, 890, 1665) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4123) [M::mem_pestat] mean and std.dev: (929.94, 753.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5352) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (231, 420, 1205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3153) [M::mem_pestat] mean and std.dev: (657.44, 691.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4127) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723110 reads in 234.057 CPU sec, 7.408 real sec sorting block 44, #reads = 1076938 mem = 536891702 peak = 1074700288 [M::mem_process_seqs] Processed 723802 reads in 277.255 CPU sec, 8.803 real sec sorting block 45, #reads = 1078308 mem = 536886526 peak = 1105027072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (87, 286527, 75, 107) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 311, 875) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2253) [M::mem_pestat] mean and std.dev: (460.26, 412.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2942) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 186, 266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 534) [M::mem_pestat] mean and std.dev: (207.02, 97.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 668) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (194, 617, 1533) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4211) [M::mem_pestat] mean and std.dev: (761.27, 761.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5550) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 452, 978) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2462) [M::mem_pestat] mean and std.dev: (615.67, 514.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3204) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 721552 sequences (100000108 bp) in 3.435 CPU sec, 3.493 real sec... [M::process] read 722196 sequences (100000080 bp) in 2.188 CPU sec, 2.193 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (88, 285879, 64, 123) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (392, 791, 1249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2963) [M::mem_pestat] mean and std.dev: (794.68, 574.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3820) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 528) [M::mem_pestat] mean and std.dev: (205.73, 96.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 660) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (96, 443, 1283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3657) [M::mem_pestat] mean and std.dev: (604.63, 583.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4844) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (275, 390, 893) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2129) [M::mem_pestat] mean and std.dev: (539.09, 406.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2747) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722318 reads in 238.617 CPU sec, 7.562 real sec [M::mem_process_seqs] Processed 722774 reads in 278.646 CPU sec, 8.865 real sec sorting block 46, #reads = 1079359 mem = 536878782 peak = 1105027072 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (102, 285904, 70, 106) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 475, 1216) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3234) [M::mem_pestat] mean and std.dev: (707.51, 621.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4243) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 187, 268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 538) [M::mem_pestat] mean and std.dev: (208.05, 98.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 673) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (134, 595, 1442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4058) [M::mem_pestat] mean and std.dev: (899.44, 913.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5366) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 503, 960) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2438) [M::mem_pestat] mean and std.dev: (599.88, 517.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3177) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 724040 sequences (100000051 bp) in 3.193 CPU sec, 3.249 real sec... [M::process] read 723308 sequences (100000076 bp) in 2.520 CPU sec, 2.515 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (80, 286532, 82, 125) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 411, 1304) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3546) [M::mem_pestat] mean and std.dev: (633.01, 655.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4667) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 186, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 529) [M::mem_pestat] mean and std.dev: (206.55, 96.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 661) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (82, 313, 675) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1861) [M::mem_pestat] mean and std.dev: (365.05, 339.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2454) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 477, 1016) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2600) [M::mem_pestat] mean and std.dev: (627.28, 591.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3392) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 721552 reads in 232.864 CPU sec, 7.369 real sec sorting block 47, #reads = 1077213 mem = 536886592 peak = 1105027072 [M::mem_process_seqs] Processed 722196 reads in 171.350 CPU sec, 5.447 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (115, 286513, 76, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (306, 649, 1378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3522) [M::mem_pestat] mean and std.dev: (754.73, 626.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4594) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 518) [M::mem_pestat] mean and std.dev: (202.67, 94.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 647) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (293, 483, 1004) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2426) [M::mem_pestat] mean and std.dev: (562.70, 426.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3137) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 351, 876) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2160) [M::mem_pestat] mean and std.dev: (503.00, 419.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2802) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723244 sequences (100000074 bp) in 3.632 CPU sec, 3.674 real sec... [M::process] read 722940 sequences (100000206 bp) in 2.316 CPU sec, 2.318 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (104, 286798, 76, 132) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 366, 1505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4085) [M::mem_pestat] mean and std.dev: (675.46, 771.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5375) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (204.34, 95.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 652) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (240, 645, 2241) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6243) [M::mem_pestat] mean and std.dev: (999.19, 1086.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8244) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (250, 438, 1034) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2602) [M::mem_pestat] mean and std.dev: (516.12, 442.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3386) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724040 reads in 239.253 CPU sec, 7.590 real sec sorting block 48, #reads = 1076904 mem = 536880352 peak = 1105027072 [M::mem_process_seqs] Processed 723308 reads in 280.766 CPU sec, 8.947 real sec sorting block 49, #reads = 1077186 mem = 536881026 peak = 1159819264 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (80, 286507, 85, 129) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 325, 1014) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2646) [M::mem_pestat] mean and std.dev: (584.70, 575.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3462) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 516) [M::mem_pestat] mean and std.dev: (203.14, 93.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (172, 521, 1166) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3154) [M::mem_pestat] mean and std.dev: (555.23, 592.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4148) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 438, 860) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2160) [M::mem_pestat] mean and std.dev: (550.07, 452.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2810) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723366 sequences (100000211 bp) in 3.222 CPU sec, 3.259 real sec... [M::process] read 722762 sequences (100000290 bp) in 2.194 CPU sec, 2.204 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (103, 285926, 63, 109) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 343, 1144) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3038) [M::mem_pestat] mean and std.dev: (627.20, 692.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3985) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (203.85, 94.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (179, 337, 1088) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2906) [M::mem_pestat] mean and std.dev: (599.49, 581.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3815) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (257, 425, 2364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6578) [M::mem_pestat] mean and std.dev: (1116.57, 1324.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8685) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723244 reads in 242.083 CPU sec, 7.679 real sec [M::process] read 722732 sequences (100000076 bp) in 2.710 CPU sec, 2.714 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (85, 286201, 64, 97) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (304, 488, 925) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2167) [M::mem_pestat] mean and std.dev: (551.53, 371.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2788) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (203.85, 94.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (224, 741, 1456) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3920) [M::mem_pestat] mean and std.dev: (916.22, 931.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5152) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 496, 811) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1963) [M::mem_pestat] mean and std.dev: (532.88, 424.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2539) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722762 reads in 137.034 CPU sec, 4.357 real sec sorting block 50, #reads = 1078153 mem = 536879523 peak = 1159819264 [M::mem_process_seqs] Processed 722940 reads in 346.959 CPU sec, 11.054 real sec sorting block 51, #reads = 1075273 mem = 536883432 peak = 1159819264 [M::process] read 723458 sequences (100000016 bp) in 3.628 CPU sec, 3.695 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (100, 285929, 68, 135) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 533, 1029) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2695) [M::mem_pestat] mean and std.dev: (595.00, 450.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3528) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 522) [M::mem_pestat] mean and std.dev: (204.31, 94.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 652) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (179, 415, 923) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2411) [M::mem_pestat] mean and std.dev: (501.24, 469.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3155) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 353, 1018) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2706) [M::mem_pestat] mean and std.dev: (583.94, 612.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3550) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723400 sequences (100000252 bp) in 2.554 CPU sec, 2.563 real sec... [M::mem_process_seqs] Processed 722732 reads in 148.293 CPU sec, 4.671 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (110, 286541, 86, 106) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 506, 1472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3994) [M::mem_pestat] mean and std.dev: (723.17, 744.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5255) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (203.37, 94.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (187, 575, 1201) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3229) [M::mem_pestat] mean and std.dev: (712.63, 677.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4243) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 327, 899) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2295) [M::mem_pestat] mean and std.dev: (534.62, 545.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2993) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (101, 286407, 59, 118) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 380, 752) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1870) [M::mem_pestat] mean and std.dev: (516.76, 437.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2429) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (203.52, 94.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (262, 615, 1104) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2788) [M::mem_pestat] mean and std.dev: (691.61, 607.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3630) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 380, 785) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1889) [M::mem_pestat] mean and std.dev: (429.91, 307.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2441) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723366 reads in 523.393 CPU sec, 16.586 real sec [M::process] read 722430 sequences (100000252 bp) in 3.152 CPU sec, 3.159 real sec... sorting block 52, #reads = 1076856 mem = 536876734 peak = 1159819264 [M::mem_process_seqs] Processed 723458 reads in 221.071 CPU sec, 7.037 real sec sorting block 53, #reads = 1077404 mem = 536882537 peak = 1167380480 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (112, 286654, 80, 98) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (224, 480, 1051) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2705) [M::mem_pestat] mean and std.dev: (610.12, 522.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3532) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 516) [M::mem_pestat] mean and std.dev: (203.13, 93.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (459, 785, 1794) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4464) [M::mem_pestat] mean and std.dev: (1162.01, 1099.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5799) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 503, 961) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2407) [M::mem_pestat] mean and std.dev: (634.37, 498.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3130) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 722348 sequences (100000024 bp) in 3.331 CPU sec, 3.422 real sec... [M::process] read 721822 sequences (100000080 bp) in 2.564 CPU sec, 2.574 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (97, 286274, 65, 122) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (237, 517, 1169) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3033) [M::mem_pestat] mean and std.dev: (705.08, 695.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3965) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 519) [M::mem_pestat] mean and std.dev: (204.03, 93.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 648) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (207, 547, 1126) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2964) [M::mem_pestat] mean and std.dev: (672.66, 576.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3883) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (271, 543, 1075) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2683) [M::mem_pestat] mean and std.dev: (665.83, 535.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3487) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723400 reads in 239.879 CPU sec, 7.609 real sec sorting block 54, #reads = 1076237 mem = 536878325 peak = 1167380480 [M::process] read 721762 sequences (100000272 bp) in 2.752 CPU sec, 2.765 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 285848, 69, 113) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 320, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1173) [M::mem_pestat] mean and std.dev: (371.85, 240.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1494) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 187, 264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 526) [M::mem_pestat] mean and std.dev: (205.84, 95.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 657) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (140, 664, 1230) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3410) [M::mem_pestat] mean and std.dev: (665.74, 689.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4500) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 430, 1134) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2994) [M::mem_pestat] mean and std.dev: (657.15, 603.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3924) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 721822 reads in 138.412 CPU sec, 4.388 real sec [M::mem_process_seqs] Processed 722430 reads in 349.873 CPU sec, 11.132 real sec sorting block 55, #reads = 1076218 mem = 536879168 peak = 1167380480 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (101, 286619, 102, 87) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 402, 749) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1825) [M::mem_pestat] mean and std.dev: (499.23, 396.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2363) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 186, 263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 525) [M::mem_pestat] mean and std.dev: (205.27, 95.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 656) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (249, 553, 1152) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2958) [M::mem_pestat] mean and std.dev: (661.83, 581.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3861) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (255, 513, 1007) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2511) [M::mem_pestat] mean and std.dev: (630.70, 498.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3263) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 721462 sequences (100000041 bp) in 3.676 CPU sec, 3.760 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (109, 285589, 83, 85) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 480, 1177) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3179) [M::mem_pestat] mean and std.dev: (675.72, 611.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4180) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 187, 265) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 529) [M::mem_pestat] mean and std.dev: (206.44, 95.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 661) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (361, 765, 1599) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4075) [M::mem_pestat] mean and std.dev: (966.20, 866.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5313) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (286, 555, 1354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3490) [M::mem_pestat] mean and std.dev: (774.17, 670.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4558) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 730582 sequences (100000145 bp) in 2.664 CPU sec, 2.701 real sec... [M::mem_process_seqs] Processed 722348 reads in 390.150 CPU sec, 12.410 real sec [M::mem_process_seqs] Processed 721762 reads in 193.022 CPU sec, 6.228 real sec sorting block 56, #reads = 1077025 mem = 536879352 peak = 1167380480 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (118, 286148, 78, 117) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (228, 404, 828) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2028) [M::mem_pestat] mean and std.dev: (531.93, 420.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2628) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (133, 187, 266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 532) [M::mem_pestat] mean and std.dev: (206.89, 96.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 665) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (144, 433, 737) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1923) [M::mem_pestat] mean and std.dev: (462.23, 390.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2516) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 394, 1033) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2607) [M::mem_pestat] mean and std.dev: (614.80, 572.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3394) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 730038 sequences (100000172 bp) in 3.321 CPU sec, 3.432 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 288727, 58, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 331, 1125) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2983) [M::mem_pestat] mean and std.dev: (648.18, 702.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3912) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 175, 244) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 478) [M::mem_pestat] mean and std.dev: (192.25, 86.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 595) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (223, 869, 1267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3355) [M::mem_pestat] mean and std.dev: (758.46, 631.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4399) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (260, 566, 821) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1943) [M::mem_pestat] mean and std.dev: (572.38, 400.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2504) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 730040 sequences (100000124 bp) in 2.540 CPU sec, 2.543 real sec... [M::mem_process_seqs] Processed 721462 reads in 254.271 CPU sec, 8.121 real sec sorting block 57, #reads = 1076174 mem = 536877723 peak = 1167380480 [M::process] read 729030 sequences (100000071 bp) in 2.566 CPU sec, 2.574 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 289591, 72, 76) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 419, 1004) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2598) [M::mem_pestat] mean and std.dev: (557.47, 461.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3395) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 175, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 484) [M::mem_pestat] mean and std.dev: (193.04, 87.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 603) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (130, 407, 1792) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5116) [M::mem_pestat] mean and std.dev: (931.86, 1173.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6778) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 454, 1076) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2778) [M::mem_pestat] mean and std.dev: (605.60, 531.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3629) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 730038 reads in 142.163 CPU sec, 4.509 real sec sorting block 58, #reads = 1079155 mem = 536880316 peak = 1167380480 [M::mem_process_seqs] Processed 730582 reads in 379.817 CPU sec, 12.085 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 289078, 49, 100) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 327, 1009) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2677) [M::mem_pestat] mean and std.dev: (543.55, 501.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3511) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 176, 247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 487) [M::mem_pestat] mean and std.dev: (193.92, 88.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 607) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (263, 618, 1403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3683) [M::mem_pestat] mean and std.dev: (816.80, 770.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4823) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 349, 1095) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2809) [M::mem_pestat] mean and std.dev: (613.41, 612.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3666) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 727028 sequences (100000018 bp) in 3.374 CPU sec, 3.416 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (85, 288878, 46, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (247, 387, 1041) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2629) [M::mem_pestat] mean and std.dev: (620.80, 505.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3423) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 178, 250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 494) [M::mem_pestat] mean and std.dev: (195.96, 89.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 616) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (159, 578, 1083) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2931) [M::mem_pestat] mean and std.dev: (642.82, 586.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3855) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 512, 1003) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2611) [M::mem_pestat] mean and std.dev: (631.73, 541.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3415) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 727238 sequences (100000086 bp) in 2.728 CPU sec, 2.730 real sec... [M::mem_process_seqs] Processed 730040 reads in 292.752 CPU sec, 9.290 real sec sorting block 59, #reads = 1079558 mem = 536880390 peak = 1167380480 [M::mem_process_seqs] Processed 729030 reads in 188.603 CPU sec, 5.959 real sec sorting block 60, #reads = 1079433 mem = 536879412 peak = 1167380480 [M::process] read 727522 sequences (100000165 bp) in 3.648 CPU sec, 3.728 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (101, 288464, 42, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 336, 1022) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2740) [M::mem_pestat] mean and std.dev: (473.26, 451.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3599) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 179, 254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 504) [M::mem_pestat] mean and std.dev: (198.84, 92.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 629) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (47, 284, 1278) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3740) [M::mem_pestat] mean and std.dev: (753.54, 962.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4971) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (257, 536, 1288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3350) [M::mem_pestat] mean and std.dev: (799.04, 795.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4381) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 730604 sequences (100000132 bp) in 2.577 CPU sec, 2.582 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (101, 288942, 52, 93) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (238, 454, 1055) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2689) [M::mem_pestat] mean and std.dev: (649.84, 588.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3506) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 179, 254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 504) [M::mem_pestat] mean and std.dev: (198.86, 91.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 629) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (323, 577, 1058) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2528) [M::mem_pestat] mean and std.dev: (591.64, 479.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3263) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (231, 383, 862) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2124) [M::mem_pestat] mean and std.dev: (528.54, 393.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2755) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727238 reads in 252.734 CPU sec, 8.216 real sec [M::mem_process_seqs] Processed 727028 reads in 291.979 CPU sec, 9.499 real sec sorting block 61, #reads = 1078873 mem = 536877282 peak = 1167380480 [M::process] read 730578 sequences (100000079 bp) in 3.183 CPU sec, 3.234 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (99, 288725, 56, 115) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 338, 1164) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3086) [M::mem_pestat] mean and std.dev: (639.63, 694.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4047) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 179, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 501) [M::mem_pestat] mean and std.dev: (198.06, 91.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 625) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (293, 747, 1643) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4343) [M::mem_pestat] mean and std.dev: (976.67, 1043.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5693) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 373, 1442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3900) [M::mem_pestat] mean and std.dev: (702.19, 698.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5129) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 730344 sequences (100000130 bp) in 2.280 CPU sec, 2.286 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (108, 289772, 66, 98) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 710, 1176) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3152) [M::mem_pestat] mean and std.dev: (720.54, 609.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4140) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 175, 247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 487) [M::mem_pestat] mean and std.dev: (193.56, 88.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 607) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (306, 539, 1563) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4077) [M::mem_pestat] mean and std.dev: (949.11, 1045.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5334) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 371, 1056) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2726) [M::mem_pestat] mean and std.dev: (578.20, 521.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3561) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 289416, 77, 107) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 315, 737) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1801) [M::mem_pestat] mean and std.dev: (415.94, 332.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2333) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 175, 247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 487) [M::mem_pestat] mean and std.dev: (193.71, 88.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 607) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (315, 849, 1917) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5121) [M::mem_pestat] mean and std.dev: (1016.49, 830.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6723) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (247, 396, 1035) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2611) [M::mem_pestat] mean and std.dev: (518.18, 442.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3399) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727522 reads in 354.750 CPU sec, 11.307 real sec sorting block 62, #reads = 1079857 mem = 536885369 peak = 1167380480 [M::mem_process_seqs] Processed 730578 reads in 288.759 CPU sec, 9.248 real sec [M::mem_process_seqs] Processed 730604 reads in 330.487 CPU sec, 10.590 real sec sorting block 63, #reads = 1079180 mem = 536881653 peak = 1167380480 [M::process] read 729614 sequences (100000180 bp) in 4.060 CPU sec, 4.149 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (107, 289270, 47, 111) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 437, 1376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3738) [M::mem_pestat] mean and std.dev: (804.38, 912.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4919) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 176, 247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 487) [M::mem_pestat] mean and std.dev: (193.90, 88.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 607) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (208, 354, 967) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2485) [M::mem_pestat] mean and std.dev: (439.20, 397.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3244) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 350, 940) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2426) [M::mem_pestat] mean and std.dev: (600.17, 607.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3169) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 728036 sequences (100000164 bp) in 2.965 CPU sec, 3.004 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (101, 288422, 66, 89) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 429, 1026) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2692) [M::mem_pestat] mean and std.dev: (660.67, 620.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3525) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 177, 249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 493) [M::mem_pestat] mean and std.dev: (195.01, 89.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 615) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (225, 720, 1325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3525) [M::mem_pestat] mean and std.dev: (850.21, 776.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4625) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (263, 496, 960) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2354) [M::mem_pestat] mean and std.dev: (650.68, 534.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3051) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 728648 sequences (100000250 bp) in 2.560 CPU sec, 2.557 real sec... [M::mem_process_seqs] Processed 730344 reads in 275.683 CPU sec, 8.751 real sec sorting block 64, #reads = 1079252 mem = 536882610 peak = 1167380480 [M::process] read 731274 sequences (100000234 bp) in 2.760 CPU sec, 2.764 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (89, 287802, 69, 94) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 316, 796) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2064) [M::mem_pestat] mean and std.dev: (466.83, 417.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2698) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 178, 251) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 497) [M::mem_pestat] mean and std.dev: (196.61, 90.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 620) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (262, 586, 946) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2314) [M::mem_pestat] mean and std.dev: (494.97, 369.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2998) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (254, 427, 964) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2384) [M::mem_pestat] mean and std.dev: (600.34, 489.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3094) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728648 reads in 155.750 CPU sec, 4.954 real sec [M::mem_process_seqs] Processed 729614 reads in 386.599 CPU sec, 12.272 real sec sorting block 65, #reads = 1075107 mem = 536882745 peak = 1167380480 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (100, 288309, 79, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 465, 1097) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2831) [M::mem_pestat] mean and std.dev: (429.93, 307.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3698) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 179, 252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 500) [M::mem_pestat] mean and std.dev: (197.32, 90.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 624) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (166, 725, 1283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3517) [M::mem_pestat] mean and std.dev: (806.40, 774.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4634) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 581, 1180) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3028) [M::mem_pestat] mean and std.dev: (728.28, 598.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3952) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 728442 sequences (100000292 bp) in 3.640 CPU sec, 3.696 real sec... [M::process] read 726728 sequences (100000011 bp) in 2.590 CPU sec, 2.589 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (106, 288511, 57, 98) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (226, 443, 1066) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2746) [M::mem_pestat] mean and std.dev: (549.30, 500.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3586) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (126, 175, 246) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 486) [M::mem_pestat] mean and std.dev: (193.05, 88.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 606) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (159, 517, 1109) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3009) [M::mem_pestat] mean and std.dev: (683.30, 686.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3959) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (279, 547, 1077) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2673) [M::mem_pestat] mean and std.dev: (657.66, 552.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3471) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728036 reads in 429.938 CPU sec, 13.647 real sec sorting block 66, #reads = 1076816 mem = 536886357 peak = 1167380480 [M::mem_process_seqs] Processed 731274 reads in 220.460 CPU sec, 7.010 real sec [M::process] read 727242 sequences (100000071 bp) in 3.169 CPU sec, 3.235 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (101, 287613, 61, 95) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 387, 995) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2543) [M::mem_pestat] mean and std.dev: (572.76, 486.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3317) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 180, 254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 504) [M::mem_pestat] mean and std.dev: (198.88, 91.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 629) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (224, 964, 2305) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6467) [M::mem_pestat] mean and std.dev: (1168.91, 1112.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8548) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 430, 1212) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3248) [M::mem_pestat] mean and std.dev: (753.84, 779.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4266) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 726948 sequences (100000055 bp) in 2.290 CPU sec, 2.294 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (105, 287777, 72, 106) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 349, 903) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2297) [M::mem_pestat] mean and std.dev: (559.03, 467.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2994) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 178, 251) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 497) [M::mem_pestat] mean and std.dev: (196.54, 90.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 620) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (218, 442, 1272) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3380) [M::mem_pestat] mean and std.dev: (678.18, 668.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4434) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 381, 822) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2142) [M::mem_pestat] mean and std.dev: (452.99, 413.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2802) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726728 reads in 274.141 CPU sec, 8.706 real sec sorting block 67, #reads = 1070153 mem = 536882399 peak = 1167380480 [M::mem_process_seqs] Processed 728442 reads in 321.391 CPU sec, 10.234 real sec sorting block 68, #reads = 1073744 mem = 536881370 peak = 1215483904 [M::process] read 726994 sequences (100000074 bp) in 3.480 CPU sec, 3.538 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (103, 286977, 76, 93) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 354, 970) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2534) [M::mem_pestat] mean and std.dev: (593.59, 526.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3316) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 179, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 501) [M::mem_pestat] mean and std.dev: (197.96, 90.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 625) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (298, 693, 1470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3814) [M::mem_pestat] mean and std.dev: (794.23, 739.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4986) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 399, 829) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2073) [M::mem_pestat] mean and std.dev: (498.42, 435.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2695) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 728894 sequences (100000032 bp) in 2.831 CPU sec, 2.839 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (103, 287270, 76, 85) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 380, 1154) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3080) [M::mem_pestat] mean and std.dev: (663.70, 732.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4043) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 180, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 501) [M::mem_pestat] mean and std.dev: (198.24, 91.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 625) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (255, 595, 1447) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3831) [M::mem_pestat] mean and std.dev: (833.42, 928.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5023) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 465, 1370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3662) [M::mem_pestat] mean and std.dev: (729.71, 769.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4808) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (101, 287405, 80, 114) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 340, 839) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2151) [M::mem_pestat] mean and std.dev: (432.53, 328.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2807) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 180, 254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 504) [M::mem_pestat] mean and std.dev: (198.47, 91.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 629) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (169, 489, 945) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2497) [M::mem_pestat] mean and std.dev: (547.85, 522.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3273) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (297, 566, 1254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3168) [M::mem_pestat] mean and std.dev: (805.27, 659.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4125) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727242 reads in 388.114 CPU sec, 12.362 real sec sorting block 69, #reads = 1070848 mem = 536886460 peak = 1215483904 [M::mem_process_seqs] Processed 726994 reads in 314.214 CPU sec, 10.072 real sec [M::mem_process_seqs] Processed 726948 reads in 360.654 CPU sec, 11.560 real sec [M::process] read 735236 sequences (100000103 bp) in 3.598 CPU sec, 3.682 real sec... sorting block 70, #reads = 1070314 mem = 536881620 peak = 1215483904 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (102, 287782, 71, 89) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 327, 946) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2488) [M::mem_pestat] mean and std.dev: (508.70, 499.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3259) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 177, 249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 491) [M::mem_pestat] mean and std.dev: (195.07, 88.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 612) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (286, 594, 1515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3973) [M::mem_pestat] mean and std.dev: (838.49, 756.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5202) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (297, 480, 1288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3270) [M::mem_pestat] mean and std.dev: (809.00, 739.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4261) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 730702 sequences (100000166 bp) in 3.132 CPU sec, 3.154 real sec... [M::process] read 730860 sequences (100000199 bp) in 2.590 CPU sec, 2.598 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 290032, 65, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (257, 604, 1658) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4460) [M::mem_pestat] mean and std.dev: (964.89, 994.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5861) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (124, 170, 237) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 463) [M::mem_pestat] mean and std.dev: (186.52, 82.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 576) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (218, 599, 1133) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2963) [M::mem_pestat] mean and std.dev: (731.75, 737.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3878) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 307, 698) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1712) [M::mem_pestat] mean and std.dev: (401.08, 327.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2219) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728894 reads in 299.894 CPU sec, 9.514 real sec sorting block 71, #reads = 1072152 mem = 536881264 peak = 1215483904 [M::mem_process_seqs] Processed 735236 reads in 225.166 CPU sec, 7.144 real sec [M::process] read 729010 sequences (100000293 bp) in 3.207 CPU sec, 3.272 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (85, 289081, 55, 103) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 379, 1288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3520) [M::mem_pestat] mean and std.dev: (568.21, 635.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4636) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 176, 247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 487) [M::mem_pestat] mean and std.dev: (193.59, 88.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 607) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (185, 515, 1281) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3473) [M::mem_pestat] mean and std.dev: (678.22, 699.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4569) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 498, 1214) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3204) [M::mem_pestat] mean and std.dev: (757.45, 732.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4199) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 727876 sequences (100000000 bp) in 2.788 CPU sec, 2.791 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (97, 289894, 63, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 358, 805) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2041) [M::mem_pestat] mean and std.dev: (446.21, 425.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2659) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 175, 245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 481) [M::mem_pestat] mean and std.dev: (192.42, 87.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 599) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (249, 587, 1267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3303) [M::mem_pestat] mean and std.dev: (771.44, 634.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4321) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 435, 1442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3918) [M::mem_pestat] mean and std.dev: (924.66, 1057.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5156) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 730860 reads in 277.540 CPU sec, 8.797 real sec sorting block 72, #reads = 1070099 mem = 536884807 peak = 1215483904 [M::process] read 727192 sequences (100000031 bp) in 3.038 CPU sec, 3.045 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (87, 288711, 44, 102) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 363, 909) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2329) [M::mem_pestat] mean and std.dev: (487.31, 397.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3039) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 177, 250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 494) [M::mem_pestat] mean and std.dev: (196.11, 90.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 616) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (338, 634, 1742) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4550) [M::mem_pestat] mean and std.dev: (951.14, 999.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5954) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (230, 582, 1258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3314) [M::mem_pestat] mean and std.dev: (811.94, 730.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4342) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 729010 reads in 153.802 CPU sec, 4.887 real sec sorting block 73, #reads = 1072926 mem = 536879965 peak = 1215483904 [M::mem_process_seqs] Processed 730702 reads in 515.182 CPU sec, 16.392 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (115, 288729, 59, 113) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 445, 772) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1952) [M::mem_pestat] mean and std.dev: (521.49, 466.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2542) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 179, 252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 498) [M::mem_pestat] mean and std.dev: (197.62, 91.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 621) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (241, 648, 1259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3295) [M::mem_pestat] mean and std.dev: (700.40, 622.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4313) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 557, 1584) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4268) [M::mem_pestat] mean and std.dev: (886.83, 930.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5610) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 729294 sequences (100000106 bp) in 3.808 CPU sec, 3.870 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (98, 288150, 70, 85) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (266, 486, 1891) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5141) [M::mem_pestat] mean and std.dev: (920.84, 1078.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6766) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 180, 254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 504) [M::mem_pestat] mean and std.dev: (198.94, 91.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 629) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (145, 405, 993) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2689) [M::mem_pestat] mean and std.dev: (571.77, 543.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3537) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (273, 461, 1877) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5085) [M::mem_pestat] mean and std.dev: (1093.86, 1150.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6689) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 728896 sequences (100000195 bp) in 2.600 CPU sec, 2.600 real sec... [M::mem_process_seqs] Processed 727876 reads in 415.967 CPU sec, 13.187 real sec sorting block 74, #reads = 1075477 mem = 536877021 peak = 1215483904 [M::mem_process_seqs] Processed 727192 reads in 190.376 CPU sec, 6.037 real sec sorting block 75, #reads = 1076578 mem = 536879985 peak = 1215483904 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 288888, 58, 109) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 306, 1608) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4458) [M::mem_pestat] mean and std.dev: (689.26, 850.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5883) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 177, 248) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 488) [M::mem_pestat] mean and std.dev: (194.65, 88.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 608) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (104, 370, 857) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2363) [M::mem_pestat] mean and std.dev: (530.85, 549.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3116) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 351, 876) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2290) [M::mem_pestat] mean and std.dev: (438.56, 376.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2997) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 729100 sequences (100000152 bp) in 3.257 CPU sec, 3.321 real sec... [M::process] read 728808 sequences (100000245 bp) in 2.356 CPU sec, 2.358 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (103, 289169, 73, 91) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 438, 1018) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2690) [M::mem_pestat] mean and std.dev: (652.39, 597.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3526) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 177, 250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 494) [M::mem_pestat] mean and std.dev: (195.87, 89.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 616) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (516, 829, 1470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3378) [M::mem_pestat] mean and std.dev: (932.23, 724.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4332) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 401, 1247) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3381) [M::mem_pestat] mean and std.dev: (687.67, 621.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4448) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 729294 reads in 255.451 CPU sec, 8.103 real sec [M::mem_process_seqs] Processed 728896 reads in 185.922 CPU sec, 5.928 real sec sorting block 76, #reads = 1078627 mem = 536877061 peak = 1215483904 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (76, 289094, 68, 113) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (244, 515, 1092) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2788) [M::mem_pestat] mean and std.dev: (692.31, 605.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3636) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 177, 250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 494) [M::mem_pestat] mean and std.dev: (195.71, 89.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 616) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (381, 745, 1187) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2799) [M::mem_pestat] mean and std.dev: (696.85, 508.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3605) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 424, 1205) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3237) [M::mem_pestat] mean and std.dev: (637.28, 611.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4253) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 728880 sequences (100000138 bp) in 3.690 CPU sec, 3.733 real sec... [M::process] read 729840 sequences (100000050 bp) in 2.437 CPU sec, 2.437 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (101, 288570, 64, 121) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 420, 971) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2453) [M::mem_pestat] mean and std.dev: (561.32, 482.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3194) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 177, 249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 491) [M::mem_pestat] mean and std.dev: (195.15, 89.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 612) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (199, 490, 1227) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3283) [M::mem_pestat] mean and std.dev: (674.32, 708.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4311) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 341, 792) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1968) [M::mem_pestat] mean and std.dev: (468.22, 416.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2556) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 729100 reads in 256.576 CPU sec, 8.131 real sec sorting block 77, #reads = 1080369 mem = 536880348 peak = 1215483904 [M::mem_process_seqs] Processed 728808 reads in 299.515 CPU sec, 9.526 real sec [M::process] read 729088 sequences (100000014 bp) in 3.091 CPU sec, 3.155 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (98, 288255, 68, 102) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (278, 506, 959) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2321) [M::mem_pestat] mean and std.dev: (548.38, 424.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3002) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 177, 249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 491) [M::mem_pestat] mean and std.dev: (195.49, 89.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 612) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (191, 624, 1010) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2648) [M::mem_pestat] mean and std.dev: (588.08, 519.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3467) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (231, 452, 984) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2490) [M::mem_pestat] mean and std.dev: (631.57, 551.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3243) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 726526 sequences (100000115 bp) in 2.170 CPU sec, 2.169 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (108, 288001, 70, 108) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (212, 449, 1035) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2681) [M::mem_pestat] mean and std.dev: (672.03, 617.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3504) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 176, 248) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 490) [M::mem_pestat] mean and std.dev: (194.40, 88.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 611) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (150, 454, 862) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2286) [M::mem_pestat] mean and std.dev: (457.02, 411.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2998) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 525, 1219) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3181) [M::mem_pestat] mean and std.dev: (775.90, 717.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4162) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (101, 287767, 82, 103) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (239, 415, 1361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3605) [M::mem_pestat] mean and std.dev: (773.82, 766.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4727) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 177, 249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 491) [M::mem_pestat] mean and std.dev: (195.02, 89.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 612) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (363, 743, 1395) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3459) [M::mem_pestat] mean and std.dev: (908.62, 705.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4491) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (239, 370, 830) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2012) [M::mem_pestat] mean and std.dev: (448.18, 368.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2603) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728880 reads in 392.396 CPU sec, 12.530 real sec sorting block 78, #reads = 1077457 mem = 536877953 peak = 1215483904 [M::mem_process_seqs] Processed 729840 reads in 324.531 CPU sec, 10.418 real sec [M::mem_process_seqs] Processed 729088 reads in 373.825 CPU sec, 11.984 real sec sorting block 79, #reads = 1075375 mem = 536881020 peak = 1217187840 [M::process] read 726708 sequences (100000086 bp) in 3.590 CPU sec, 3.690 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (90, 287596, 57, 129) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 394, 906) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2304) [M::mem_pestat] mean and std.dev: (545.20, 458.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3003) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 180, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 501) [M::mem_pestat] mean and std.dev: (198.42, 91.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 625) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (306, 478, 1465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3783) [M::mem_pestat] mean and std.dev: (781.65, 716.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4942) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (237, 491, 1141) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2949) [M::mem_pestat] mean and std.dev: (606.50, 503.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3853) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 80, #reads = 1067924 mem = 536877869 peak = 1217187840 [M::process] read 726434 sequences (100000146 bp) in 3.182 CPU sec, 3.248 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (96, 287607, 48, 114) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (244, 534, 1412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3748) [M::mem_pestat] mean and std.dev: (784.94, 786.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4916) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 180, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 501) [M::mem_pestat] mean and std.dev: (198.40, 91.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 625) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (199, 561, 2009) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5629) [M::mem_pestat] mean and std.dev: (968.41, 1147.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7439) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (231, 404, 909) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2265) [M::mem_pestat] mean and std.dev: (528.41, 463.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2943) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 726042 sequences (100000069 bp) in 2.527 CPU sec, 2.537 real sec... [M::mem_process_seqs] Processed 726526 reads in 263.847 CPU sec, 8.370 real sec [M::mem_process_seqs] Processed 726708 reads in 190.966 CPU sec, 6.037 real sec sorting block 81, #reads = 1076958 mem = 536883686 peak = 1217187840 [M::process] read 725724 sequences (100000140 bp) in 3.596 CPU sec, 3.674 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (97, 287072, 71, 102) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 673, 1452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3962) [M::mem_pestat] mean and std.dev: (882.46, 877.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5217) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 181, 256) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 508) [M::mem_pestat] mean and std.dev: (199.88, 92.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 634) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (214, 542, 1934) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5374) [M::mem_pestat] mean and std.dev: (1084.28, 1330.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7094) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 414, 857) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2115) [M::mem_pestat] mean and std.dev: (579.93, 511.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2744) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 725908 sequences (100000094 bp) in 2.670 CPU sec, 2.673 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (90, 287601, 52, 107) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (216, 445, 905) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2283) [M::mem_pestat] mean and std.dev: (569.59, 490.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2972) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 180, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 505) [M::mem_pestat] mean and std.dev: (199.27, 92.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 630) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (230, 577, 961) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2423) [M::mem_pestat] mean and std.dev: (614.53, 507.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3154) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (216, 457, 917) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2319) [M::mem_pestat] mean and std.dev: (545.56, 456.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3020) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726042 reads in 256.457 CPU sec, 8.119 real sec sorting block 82, #reads = 1075555 mem = 536884422 peak = 1217187840 [M::mem_process_seqs] Processed 726434 reads in 297.025 CPU sec, 9.437 real sec [M::process] read 730630 sequences (100000157 bp) in 3.152 CPU sec, 3.205 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (123, 287096, 69, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (255, 604, 1471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3903) [M::mem_pestat] mean and std.dev: (881.34, 901.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5119) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 181, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 505) [M::mem_pestat] mean and std.dev: (199.29, 91.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 630) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (236, 657, 1266) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3326) [M::mem_pestat] mean and std.dev: (889.50, 876.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4395) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 390, 670) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1546) [M::mem_pestat] mean and std.dev: (433.15, 274.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1984) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 728170 sequences (100000053 bp) in 2.078 CPU sec, 2.082 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (134, 286364, 78, 105) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 380, 1203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3189) [M::mem_pestat] mean and std.dev: (590.96, 532.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4182) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 181, 254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 502) [M::mem_pestat] mean and std.dev: (199.02, 91.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 626) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (168, 549, 1020) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2724) [M::mem_pestat] mean and std.dev: (618.04, 610.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3576) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 451, 1045) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2727) [M::mem_pestat] mean and std.dev: (665.01, 663.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3568) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725724 reads in 272.664 CPU sec, 8.665 real sec sorting block 83, #reads = 1075728 mem = 536884565 peak = 1217187840 [M::mem_process_seqs] Processed 725908 reads in 324.829 CPU sec, 10.354 real sec sorting block 84, #reads = 1068416 mem = 536883034 peak = 1217187840 [M::process] read 727490 sequences (100000230 bp) in 2.949 CPU sec, 2.990 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (85, 288918, 58, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 405, 1199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3219) [M::mem_pestat] mean and std.dev: (701.70, 743.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4229) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 175, 244) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 478) [M::mem_pestat] mean and std.dev: (191.78, 86.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 595) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (259, 602, 1334) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3484) [M::mem_pestat] mean and std.dev: (822.02, 688.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4559) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 497, 1271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3331) [M::mem_pestat] mean and std.dev: (725.48, 654.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4361) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 726236 sequences (100000231 bp) in 2.230 CPU sec, 2.234 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 288808, 77, 116) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 445, 1387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3791) [M::mem_pestat] mean and std.dev: (735.44, 694.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4993) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 178, 250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 494) [M::mem_pestat] mean and std.dev: (196.12, 89.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 616) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (210, 342, 856) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2148) [M::mem_pestat] mean and std.dev: (436.87, 405.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2794) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 441, 1072) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2806) [M::mem_pestat] mean and std.dev: (620.55, 566.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3673) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 730630 reads in 249.158 CPU sec, 7.903 real sec [M::mem_process_seqs] Processed 728170 reads in 173.932 CPU sec, 5.576 real sec sorting block 85, #reads = 1074162 mem = 536882553 peak = 1217187840 [M::process] read 725128 sequences (100000178 bp) in 3.141 CPU sec, 3.180 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (93, 288667, 69, 105) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 403, 1289) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3449) [M::mem_pestat] mean and std.dev: (666.62, 562.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4529) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 178, 251) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 495) [M::mem_pestat] mean and std.dev: (196.71, 90.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 617) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (320, 624, 1555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4025) [M::mem_pestat] mean and std.dev: (915.84, 819.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5260) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (279, 468, 1373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3561) [M::mem_pestat] mean and std.dev: (736.26, 722.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4655) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 725386 sequences (100000023 bp) in 2.500 CPU sec, 2.503 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 288218, 57, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (229, 504, 1291) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3415) [M::mem_pestat] mean and std.dev: (790.83, 777.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4477) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 181, 256) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 508) [M::mem_pestat] mean and std.dev: (199.94, 92.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 634) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (226, 482, 873) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2167) [M::mem_pestat] mean and std.dev: (522.30, 468.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2814) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (247, 408, 960) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2386) [M::mem_pestat] mean and std.dev: (551.99, 479.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3099) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (77, 287544, 68, 94) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (227, 471, 1370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3656) [M::mem_pestat] mean and std.dev: (795.96, 827.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4799) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 182, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 512) [M::mem_pestat] mean and std.dev: (201.62, 93.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 639) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (206, 530, 1257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3359) [M::mem_pestat] mean and std.dev: (704.59, 609.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4410) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 448, 965) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2419) [M::mem_pestat] mean and std.dev: (651.75, 537.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3146) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727490 reads in 337.073 CPU sec, 10.738 real sec sorting block 86, #reads = 1078832 mem = 536879164 peak = 1217187840 [M::mem_process_seqs] Processed 726236 reads in 269.384 CPU sec, 8.618 real sec [M::mem_process_seqs] Processed 725128 reads in 308.727 CPU sec, 9.882 real sec sorting block 87, #reads = 1080945 mem = 536881272 peak = 1217187840 [M::process] read 726422 sequences (100000112 bp) in 3.586 CPU sec, 3.650 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (95, 287924, 47, 115) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 542, 1123) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2951) [M::mem_pestat] mean and std.dev: (763.42, 712.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3865) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 182, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 514) [M::mem_pestat] mean and std.dev: (201.18, 93.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 642) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (292, 564, 1140) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2836) [M::mem_pestat] mean and std.dev: (611.60, 526.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3684) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 379, 1067) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2775) [M::mem_pestat] mean and std.dev: (649.23, 625.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3629) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 728918 sequences (100000001 bp) in 3.096 CPU sec, 3.137 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (102, 288004, 59, 92) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 320, 715) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1787) [M::mem_pestat] mean and std.dev: (446.82, 392.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2323) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 180, 257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 511) [M::mem_pestat] mean and std.dev: (200.44, 93.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 638) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (228, 474, 1085) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2799) [M::mem_pestat] mean and std.dev: (583.33, 509.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3656) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (281, 529, 1300) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3338) [M::mem_pestat] mean and std.dev: (813.07, 758.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4357) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 725386 reads in 242.503 CPU sec, 7.684 real sec [M::process] read 727860 sequences (100000135 bp) in 2.734 CPU sec, 2.745 real sec... sorting block 88, #reads = 1079272 mem = 536881191 peak = 1217187840 [M::mem_process_seqs] Processed 726422 reads in 176.622 CPU sec, 5.563 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (80, 289144, 59, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 484, 1137) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2995) [M::mem_pestat] mean and std.dev: (678.66, 629.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3924) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 177, 248) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 488) [M::mem_pestat] mean and std.dev: (194.76, 88.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 608) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (248, 441, 1313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3443) [M::mem_pestat] mean and std.dev: (722.31, 736.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4508) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 534, 1105) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2833) [M::mem_pestat] mean and std.dev: (609.75, 493.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3697) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 727414 sequences (100000011 bp) in 3.230 CPU sec, 3.297 real sec... [M::process] read 726892 sequences (100000033 bp) in 2.520 CPU sec, 2.518 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (92, 288350, 63, 112) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 611, 1410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3808) [M::mem_pestat] mean and std.dev: (728.78, 737.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5007) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 178, 252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 498) [M::mem_pestat] mean and std.dev: (197.07, 90.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 621) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (246, 492, 1214) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3150) [M::mem_pestat] mean and std.dev: (667.58, 578.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4118) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (251, 426, 1061) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2681) [M::mem_pestat] mean and std.dev: (607.18, 530.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3491) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728918 reads in 241.006 CPU sec, 7.642 real sec sorting block 89, #reads = 1080325 mem = 536883459 peak = 1217187840 [M::mem_process_seqs] Processed 727860 reads in 173.881 CPU sec, 5.528 real sec sorting block 90, #reads = 1080162 mem = 536882234 peak = 1217187840 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (96, 288143, 84, 94) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (275, 647, 1610) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4280) [M::mem_pestat] mean and std.dev: (842.95, 737.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5615) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 179, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 501) [M::mem_pestat] mean and std.dev: (197.95, 91.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 625) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (172, 729, 1132) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3052) [M::mem_pestat] mean and std.dev: (674.17, 605.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4012) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (357, 716, 2200) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5886) [M::mem_pestat] mean and std.dev: (1141.21, 1145.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7729) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 726126 sequences (100000190 bp) in 3.322 CPU sec, 3.359 real sec... [M::process] read 725950 sequences (100000151 bp) in 2.560 CPU sec, 2.566 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (95, 287883, 76, 102) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (214, 492, 1623) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4441) [M::mem_pestat] mean and std.dev: (859.85, 908.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5850) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 180, 254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 504) [M::mem_pestat] mean and std.dev: (198.75, 91.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 629) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (187, 498, 1421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3889) [M::mem_pestat] mean and std.dev: (793.54, 919.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5123) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (272, 395, 853) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2015) [M::mem_pestat] mean and std.dev: (589.99, 464.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2596) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727414 reads in 245.631 CPU sec, 7.780 real sec [M::mem_process_seqs] Processed 726892 reads in 180.382 CPU sec, 5.742 real sec sorting block 91, #reads = 1078853 mem = 536877727 peak = 1217187840 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 286943, 66, 89) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (231, 423, 927) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2319) [M::mem_pestat] mean and std.dev: (488.65, 414.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3015) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 180, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 505) [M::mem_pestat] mean and std.dev: (199.44, 92.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 630) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (297, 727, 1493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3885) [M::mem_pestat] mean and std.dev: (920.54, 805.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5081) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 500, 1019) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2607) [M::mem_pestat] mean and std.dev: (573.64, 443.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3401) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 727160 sequences (100000008 bp) in 3.256 CPU sec, 3.295 real sec... [M::process] read 726300 sequences (100000074 bp) in 2.580 CPU sec, 2.580 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (90, 287642, 73, 96) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 415, 1341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3637) [M::mem_pestat] mean and std.dev: (564.54, 518.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4785) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 181, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 505) [M::mem_pestat] mean and std.dev: (199.34, 91.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 630) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (147, 506, 1273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3525) [M::mem_pestat] mean and std.dev: (667.96, 688.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4651) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (259, 405, 845) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2017) [M::mem_pestat] mean and std.dev: (534.10, 425.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2603) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726126 reads in 246.174 CPU sec, 7.797 real sec sorting block 92, #reads = 1079229 mem = 536880349 peak = 1217187840 [M::mem_process_seqs] Processed 725950 reads in 179.272 CPU sec, 5.703 real sec [M::process] read 726126 sequences (100000137 bp) in 3.400 CPU sec, 3.444 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (83, 287300, 83, 87) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 448, 1351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3705) [M::mem_pestat] mean and std.dev: (702.63, 723.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4882) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 179, 252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 498) [M::mem_pestat] mean and std.dev: (197.44, 90.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 621) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (188, 646, 1336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3632) [M::mem_pestat] mean and std.dev: (774.81, 699.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4780) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 495, 1496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4054) [M::mem_pestat] mean and std.dev: (862.40, 898.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5333) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 726492 sequences (100000241 bp) in 2.590 CPU sec, 2.587 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (94, 287042, 60, 92) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 484, 949) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2493) [M::mem_pestat] mean and std.dev: (594.53, 549.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3265) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 180, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 499) [M::mem_pestat] mean and std.dev: (197.70, 90.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 622) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (169, 422, 1085) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2917) [M::mem_pestat] mean and std.dev: (647.80, 633.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3833) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 336, 864) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2226) [M::mem_pestat] mean and std.dev: (549.90, 574.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2907) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (112, 287153, 73, 105) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (218, 397, 730) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1754) [M::mem_pestat] mean and std.dev: (479.96, 375.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2266) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 180, 253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 499) [M::mem_pestat] mean and std.dev: (198.16, 90.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 622) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (212, 464, 1254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3338) [M::mem_pestat] mean and std.dev: (802.85, 771.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4380) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (249, 459, 914) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2244) [M::mem_pestat] mean and std.dev: (532.18, 420.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2909) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 727160 reads in 356.636 CPU sec, 11.354 real sec sorting block 93, #reads = 1076112 mem = 536886656 peak = 1217187840 [M::mem_process_seqs] Processed 726300 reads in 283.643 CPU sec, 9.075 real sec [M::mem_process_seqs] Processed 726126 reads in 325.388 CPU sec, 10.420 real sec sorting block 94, #reads = 1072445 mem = 536880148 peak = 1234427904 [M::process] read 726632 sequences (100000113 bp) in 3.479 CPU sec, 3.543 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (101, 286942, 76, 105) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 480, 1291) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3455) [M::mem_pestat] mean and std.dev: (762.62, 750.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4537) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 179, 252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 496) [M::mem_pestat] mean and std.dev: (197.32, 89.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 618) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (173, 500, 966) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2552) [M::mem_pestat] mean and std.dev: (523.48, 494.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3345) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (249, 558, 1124) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2874) [M::mem_pestat] mean and std.dev: (754.69, 643.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3749) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 95, #reads = 1076002 mem = 536879857 peak = 1234427904 [M::process] read 726880 sequences (100000010 bp) in 2.920 CPU sec, 2.955 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (89, 287151, 72, 93) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (221, 563, 1012) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2594) [M::mem_pestat] mean and std.dev: (608.56, 491.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3385) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 179, 252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 498) [M::mem_pestat] mean and std.dev: (197.15, 89.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 621) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (302, 647, 1995) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5381) [M::mem_pestat] mean and std.dev: (1156.07, 1275.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7074) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (250, 552, 1263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3289) [M::mem_pestat] mean and std.dev: (792.41, 720.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4302) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 726274 sequences (100000233 bp) in 2.630 CPU sec, 2.627 real sec... [M::mem_process_seqs] Processed 726492 reads in 260.502 CPU sec, 8.238 real sec [M::mem_process_seqs] Processed 726632 reads in 191.520 CPU sec, 6.034 real sec sorting block 96, #reads = 1075413 mem = 536878192 peak = 1234427904 [M::process] read 733666 sequences (100000006 bp) in 3.683 CPU sec, 3.747 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (95, 287544, 58, 91) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 299, 842) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2216) [M::mem_pestat] mean and std.dev: (534.98, 499.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2903) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 179, 250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 492) [M::mem_pestat] mean and std.dev: (196.09, 88.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 613) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (151, 766, 1752) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4954) [M::mem_pestat] mean and std.dev: (816.84, 739.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6555) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 361, 890) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2258) [M::mem_pestat] mean and std.dev: (494.24, 449.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2942) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 730482 sequences (100000092 bp) in 2.620 CPU sec, 2.618 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (89, 286621, 66, 103) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 369, 816) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2050) [M::mem_pestat] mean and std.dev: (478.41, 378.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2667) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 180, 251) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 493) [M::mem_pestat] mean and std.dev: (196.96, 89.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 614) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (132, 516, 926) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2514) [M::mem_pestat] mean and std.dev: (552.21, 453.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3308) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 401, 1077) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2777) [M::mem_pestat] mean and std.dev: (603.80, 566.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3627) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726880 reads in 279.416 CPU sec, 8.856 real sec sorting block 97, #reads = 1073842 mem = 536887689 peak = 1234427904 [M::mem_process_seqs] Processed 726274 reads in 329.061 CPU sec, 10.463 real sec [M::process] read 728674 sequences (100000276 bp) in 3.154 CPU sec, 3.190 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (94, 289675, 57, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (248, 426, 934) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2306) [M::mem_pestat] mean and std.dev: (579.75, 428.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2992) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (125, 171, 238) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 464) [M::mem_pestat] mean and std.dev: (187.42, 83.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 577) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (223, 512, 1087) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2815) [M::mem_pestat] mean and std.dev: (596.69, 510.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3679) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 271, 1004) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2604) [M::mem_pestat] mean and std.dev: (546.66, 516.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3404) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 727566 sequences (100000068 bp) in 2.590 CPU sec, 2.588 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (90, 288766, 72, 102) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 473, 1019) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2617) [M::mem_pestat] mean and std.dev: (617.54, 517.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3416) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (127, 175, 245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 481) [M::mem_pestat] mean and std.dev: (192.02, 86.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 599) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (254, 617, 1261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3275) [M::mem_pestat] mean and std.dev: (690.58, 592.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4282) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 492, 1133) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2961) [M::mem_pestat] mean and std.dev: (662.13, 626.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3875) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 733666 reads in 270.478 CPU sec, 8.572 real sec sorting block 98, #reads = 1066952 mem = 536882688 peak = 1234427904 [M::mem_process_seqs] Processed 730482 reads in 313.271 CPU sec, 9.959 real sec sorting block 99, #reads = 1075673 mem = 536880674 peak = 1234427904 [M::process] read 725906 sequences (100000237 bp) in 3.367 CPU sec, 3.401 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (87, 287931, 74, 91) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 341, 816) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2102) [M::mem_pestat] mean and std.dev: (444.01, 409.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2745) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (128, 177, 250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 494) [M::mem_pestat] mean and std.dev: (195.97, 89.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 616) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (175, 658, 1559) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4327) [M::mem_pestat] mean and std.dev: (881.65, 892.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5711) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 439, 1113) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2855) [M::mem_pestat] mean and std.dev: (574.00, 530.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3726) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 725730 sequences (100000174 bp) in 2.590 CPU sec, 2.592 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (74, 288185, 76, 93) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 328, 726) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1840) [M::mem_pestat] mean and std.dev: (439.55, 427.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2397) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 179, 252) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 498) [M::mem_pestat] mean and std.dev: (197.56, 90.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 621) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (228, 781, 1385) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3699) [M::mem_pestat] mean and std.dev: (952.36, 989.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4911) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (237, 539, 1270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3336) [M::mem_pestat] mean and std.dev: (599.34, 593.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4369) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (108, 287835, 56, 105) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (282, 428, 1180) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2976) [M::mem_pestat] mean and std.dev: (696.15, 626.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3874) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 181, 257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 511) [M::mem_pestat] mean and std.dev: (200.72, 93.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 638) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (136, 514, 1607) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4549) [M::mem_pestat] mean and std.dev: (933.20, 1150.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6020) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 375, 772) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1920) [M::mem_pestat] mean and std.dev: (499.62, 422.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2494) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 728674 reads in 362.272 CPU sec, 11.536 real sec [M::mem_process_seqs] Processed 727566 reads in 290.439 CPU sec, 9.293 real sec sorting block 100, #reads = 1076285 mem = 536879483 peak = 1234427904 [M::mem_process_seqs] Processed 725906 reads in 332.094 CPU sec, 10.628 real sec [M::process] read 727246 sequences (100000161 bp) in 3.302 CPU sec, 3.361 real sec... sorting block 101, #reads = 1076161 mem = 536878897 peak = 1234427904 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (123, 287553, 67, 92) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 587, 1256) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3362) [M::mem_pestat] mean and std.dev: (596.73, 485.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4415) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 181, 257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 511) [M::mem_pestat] mean and std.dev: (200.97, 94.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 638) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (283, 707, 1850) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4984) [M::mem_pestat] mean and std.dev: (1090.26, 1173.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6551) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 386, 739) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1765) [M::mem_pestat] mean and std.dev: (436.40, 330.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2278) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 726054 sequences (100000260 bp) in 3.124 CPU sec, 3.156 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (107, 287716, 63, 113) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 366, 1062) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2792) [M::mem_pestat] mean and std.dev: (661.90, 635.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3657) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (129, 179, 254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 504) [M::mem_pestat] mean and std.dev: (198.48, 91.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 629) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (163, 550, 1095) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2959) [M::mem_pestat] mean and std.dev: (622.20, 555.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3891) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 553, 1444) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3910) [M::mem_pestat] mean and std.dev: (934.83, 913.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5143) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 725122 sequences (100000057 bp) in 2.510 CPU sec, 2.505 real sec... [M::mem_process_seqs] Processed 725730 reads in 253.104 CPU sec, 8.003 real sec [M::mem_process_seqs] Processed 727246 reads in 182.993 CPU sec, 5.777 real sec sorting block 102, #reads = 1076240 mem = 536881872 peak = 1234427904 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (91, 287165, 62, 91) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (308, 556, 983) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2333) [M::mem_pestat] mean and std.dev: (629.93, 438.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3008) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (130, 180, 254) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 502) [M::mem_pestat] mean and std.dev: (198.97, 91.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 626) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (163, 510, 1099) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2971) [M::mem_pestat] mean and std.dev: (627.07, 656.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3907) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 390, 968) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2450) [M::mem_pestat] mean and std.dev: (509.44, 485.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3191) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 724550 sequences (100000013 bp) in 3.347 CPU sec, 3.417 real sec... [M::process] read 724110 sequences (100000083 bp) in 2.570 CPU sec, 2.572 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (104, 286788, 75, 92) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 532, 1153) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3125) [M::mem_pestat] mean and std.dev: (592.77, 565.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4111) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 182, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 512) [M::mem_pestat] mean and std.dev: (201.59, 93.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 639) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (286, 572, 998) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2422) [M::mem_pestat] mean and std.dev: (650.49, 484.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3134) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 377, 966) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2500) [M::mem_pestat] mean and std.dev: (520.81, 452.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3267) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 726054 reads in 248.399 CPU sec, 7.864 real sec sorting block 103, #reads = 1078181 mem = 536882449 peak = 1234427904 [M::mem_process_seqs] Processed 725122 reads in 179.466 CPU sec, 5.709 real sec [M::process] read 723122 sequences (100000095 bp) in 3.396 CPU sec, 3.430 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (131, 286496, 59, 141) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 416, 885) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2229) [M::mem_pestat] mean and std.dev: (514.19, 432.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2901) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 515) [M::mem_pestat] mean and std.dev: (202.53, 93.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 643) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (112, 526, 882) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2422) [M::mem_pestat] mean and std.dev: (494.28, 475.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3192) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 480, 1006) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2536) [M::mem_pestat] mean and std.dev: (691.66, 631.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3301) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723338 sequences (100000231 bp) in 2.250 CPU sec, 2.252 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (91, 286451, 78, 88) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (231, 450, 1044) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2670) [M::mem_pestat] mean and std.dev: (678.64, 580.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3483) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 183, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 515) [M::mem_pestat] mean and std.dev: (202.20, 93.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 643) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (372, 698, 1199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2853) [M::mem_pestat] mean and std.dev: (765.87, 548.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3680) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 629, 1089) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2785) [M::mem_pestat] mean and std.dev: (716.30, 667.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3633) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 724110 reads in 258.969 CPU sec, 8.214 real sec sorting block 104, #reads = 1076170 mem = 536883437 peak = 1234427904 [M::mem_process_seqs] Processed 724550 reads in 300.655 CPU sec, 9.569 real sec sorting block 105, #reads = 1072691 mem = 536878390 peak = 1243389952 [M::process] read 722608 sequences (100000118 bp) in 2.863 CPU sec, 2.928 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (103, 285882, 72, 92) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (228, 409, 1079) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2781) [M::mem_pestat] mean and std.dev: (589.00, 516.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3632) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 516) [M::mem_pestat] mean and std.dev: (202.85, 93.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (237, 581, 1539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4143) [M::mem_pestat] mean and std.dev: (781.00, 844.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5445) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 631, 1188) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3120) [M::mem_pestat] mean and std.dev: (692.17, 598.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4086) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723016 sequences (100000255 bp) in 2.117 CPU sec, 2.126 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (102, 285901, 83, 99) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 360, 840) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2056) [M::mem_pestat] mean and std.dev: (474.78, 413.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2664) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 513) [M::mem_pestat] mean and std.dev: (202.49, 92.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 640) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (212, 470, 929) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2363) [M::mem_pestat] mean and std.dev: (548.91, 476.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3080) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 391, 1035) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2741) [M::mem_pestat] mean and std.dev: (555.67, 533.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3594) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (98, 285840, 82, 87) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (214, 488, 893) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2251) [M::mem_pestat] mean and std.dev: (567.03, 478.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2930) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 516) [M::mem_pestat] mean and std.dev: (203.18, 93.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (184, 512, 1258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3406) [M::mem_pestat] mean and std.dev: (609.97, 650.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4480) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (289, 662, 1237) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3133) [M::mem_pestat] mean and std.dev: (709.60, 598.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4081) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723122 reads in 346.673 CPU sec, 11.057 real sec [M::mem_process_seqs] Processed 723338 reads in 276.647 CPU sec, 8.877 real sec sorting block 106, #reads = 1074368 mem = 536877657 peak = 1243389952 [M::mem_process_seqs] Processed 722608 reads in 316.540 CPU sec, 10.158 real sec [M::process] read 722768 sequences (100000264 bp) in 2.973 CPU sec, 3.015 real sec... sorting block 107, #reads = 1074184 mem = 536876837 peak = 1243389952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (108, 285306, 70, 116) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 428, 1052) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2692) [M::mem_pestat] mean and std.dev: (584.33, 553.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3512) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 513) [M::mem_pestat] mean and std.dev: (202.55, 92.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 640) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (162, 383, 710) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1806) [M::mem_pestat] mean and std.dev: (438.68, 424.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2354) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 440, 1384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3708) [M::mem_pestat] mean and std.dev: (735.28, 781.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4870) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 722904 sequences (100000094 bp) in 2.951 CPU sec, 3.023 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (96, 285512, 75, 102) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 436, 798) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2034) [M::mem_pestat] mean and std.dev: (457.08, 341.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2652) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 258) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 510) [M::mem_pestat] mean and std.dev: (201.97, 91.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 636) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (258, 740, 1510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4014) [M::mem_pestat] mean and std.dev: (967.58, 927.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5266) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 561, 1163) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3041) [M::mem_pestat] mean and std.dev: (835.30, 799.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4032) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 722770 sequences (100000069 bp) in 1.978 CPU sec, 1.983 real sec... [M::mem_process_seqs] Processed 723016 reads in 247.323 CPU sec, 7.860 real sec sorting block 108, #reads = 1075136 mem = 536877790 peak = 1243389952 [M::mem_process_seqs] Processed 722768 reads in 180.917 CPU sec, 5.740 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (95, 285997, 78, 114) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 381, 753) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1865) [M::mem_pestat] mean and std.dev: (497.48, 430.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2421) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 513) [M::mem_pestat] mean and std.dev: (202.69, 92.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 640) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (160, 697, 1110) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3010) [M::mem_pestat] mean and std.dev: (636.46, 573.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3960) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 541, 1292) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3442) [M::mem_pestat] mean and std.dev: (767.23, 709.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4517) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 723018 sequences (100000122 bp) in 3.649 CPU sec, 3.715 real sec... [M::process] read 723380 sequences (100000200 bp) in 2.560 CPU sec, 2.562 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (87, 285779, 79, 119) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (244, 397, 1061) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2695) [M::mem_pestat] mean and std.dev: (675.10, 611.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3512) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 185, 260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 516) [M::mem_pestat] mean and std.dev: (203.27, 93.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 644) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (218, 436, 1184) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3116) [M::mem_pestat] mean and std.dev: (638.01, 624.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4082) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 405, 782) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1944) [M::mem_pestat] mean and std.dev: (534.37, 419.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2525) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 722904 reads in 239.266 CPU sec, 7.561 real sec sorting block 109, #reads = 1074431 mem = 536878155 peak = 1243389952 [M::mem_process_seqs] Processed 722770 reads in 277.521 CPU sec, 8.810 real sec [M::process] read 226538 sequences (31255851 bp) in 1.322 CPU sec, 1.335 real sec... sorting block 110, #reads = 1075057 mem = 536885627 peak = 1243389952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (95, 286723, 59, 90) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (247, 452, 976) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2434) [M::mem_pestat] mean and std.dev: (646.19, 555.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3163) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 513) [M::mem_pestat] mean and std.dev: (202.52, 92.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 640) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (186, 357, 1063) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2817) [M::mem_pestat] mean and std.dev: (472.31, 464.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3694) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 468, 974) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2470) [M::mem_pestat] mean and std.dev: (590.01, 507.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3218) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (104, 286421, 71, 94) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (246, 494, 1242) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3234) [M::mem_pestat] mean and std.dev: (701.27, 735.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4230) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (132, 184, 259) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 513) [M::mem_pestat] mean and std.dev: (202.47, 92.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 640) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (218, 475, 1170) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3074) [M::mem_pestat] mean and std.dev: (699.41, 629.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4026) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 450, 1159) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3009) [M::mem_pestat] mean and std.dev: (684.74, 660.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3934) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (28, 89671, 22, 27) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (235, 670, 1590) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4300) [M::mem_pestat] mean and std.dev: (805.85, 859.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5655) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (131, 182, 255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 503) [M::mem_pestat] mean and std.dev: (200.22, 91.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 627) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (254, 932, 1264) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3284) [M::mem_pestat] mean and std.dev: (797.30, 668.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4294) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 265, 938) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2458) [M::mem_pestat] mean and std.dev: (699.77, 867.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4171) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 723018 reads in 267.410 CPU sec, 8.621 real sec [M::mem_process_seqs] Processed 723380 reads in 207.239 CPU sec, 6.692 real sec [M::mem_process_seqs] Processed 226538 reads in 221.083 CPU sec, 7.145 real sec sorting block 111, #reads = 1076283 mem = 536881079 peak = 1243389952 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 00050657 features: 1f8bfbff fffa320b extended: d19f47ab 00000818 amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) Platinum 8259CL CPU @ 2.50GHz threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 119897470 overall: 71396548608 mem 24816.665 user 259.246 sys 811.400 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:A23MHWWLT4.1029_BICJ-T1-TDNA-1_A23MHWWLT4_1.L001\tPU:L001\tSM:1029_BICJ-T1-TDNA-1_A23MHWWLT4_1\tLB:1029_BICJ-T1-TDNA-1_A23MHWWLT4_1\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 1029_BICJ-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz 1029_BICJ-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz [main] Real time: 811.430 sec; CPU: 25075.915 sec sorting block 112, #reads = 682275 mem = 341265558 peak = 1243389952 uniq header count 1 merging 113 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 00050657 features: 1f8bfbff fffa320b extended: d19f47ab 00000818 amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) Platinum 8259CL CPU @ 2.50GHz threads: 31 max 48 algo: util-sort license: sentieon:util=1 output file size: 6624839772 output reads: 121239047 bam_mem_sort: 113 calls 109.781 user 0.838 sys 110.840 real bam_write: 113 calls 66.562 user 4.015 sys 78.823 real execute: 1 calls 42.779 user 1.132 sys 870.892 real merge_files: 1 calls 42.736 user 1.102 sys 58.953 real parse_chunk: 1803 calls 146.313 user 29.870 sys 178.715 real read_chunk: 4895 calls 72.863 user 45.017 sys 779.705 real sort_block: 1 calls 47.902 user 43.791 sys 747.864 real write_chunk: 3090 calls 41.873 user 0.824 sys 57.416 real overall: 3831853056 mem 2369.065 user 101.609 sys 870.914 real ls: cannot access '*.cram': No such file or directory