cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i 1136_6TL-T1-TDNA-1_A23MHWWLT4_1.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed 1136_6TL-T1-TDNA-1_A23MHWWLT4_1_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics This software is licensed to bgold@natera.com by Sentieon Inc. progress 5% @chr1:187000001, elapsed 3.2s, est remaining 60.9s, peak mem 2380MB, user 78.0s, sys 2.7s, output queue size 44 progress 10% @chr2:17000001, elapsed 6.2s, est remaining 55.8s, peak mem 3122MB, user 170.8s, sys 4.5s, output queue size 96 progress 15% @chr2:201000001, elapsed 9.0s, est remaining 51.1s, peak mem 4018MB, user 254.2s, sys 6.4s, output queue size 122 progress 20% @chr3:161000001, elapsed 11.3s, est remaining 45.4s, peak mem 4052MB, user 328.5s, sys 7.5s, output queue size 174 progress 25% @chr4:124000001, elapsed 13.7s, est remaining 41.0s, peak mem 4207MB, user 397.8s, sys 8.4s, output queue size 302 progress 30% @chr5:106000001, elapsed 15.7s, est remaining 36.5s, peak mem 4375MB, user 454.0s, sys 8.9s, output queue size 464 progress 35% @chr6:63000001, elapsed 18.4s, est remaining 34.2s, peak mem 4448MB, user 533.0s, sys 9.6s, output queue size 625 progress 40% @chr7:66000001, elapsed 21.4s, est remaining 32.1s, peak mem 4855MB, user 615.1s, sys 10.4s, output queue size 786 progress 45% @chr8:79000001, elapsed 25.3s, est remaining 30.9s, peak mem 5698MB, user 733.1s, sys 11.3s, output queue size 204 progress 50% @chr9:42000001, elapsed 30.6s, est remaining 30.6s, peak mem 7134MB, user 871.4s, sys 13.2s, output queue size 366 progress 55% @chr10:94000001, elapsed 34.0s, est remaining 27.8s, peak mem 7316MB, user 994.7s, sys 14.4s, output queue size 348 progress 60% @chr12:5000001, elapsed 36.5s, est remaining 24.3s, peak mem 7318MB, user 1085.6s, sys 15.4s, output queue size 510 progress 65% @chr13:30000001, elapsed 39.8s, est remaining 21.4s, peak mem 7318MB, user 1187.5s, sys 16.2s, output queue size 474 progress 70% @chr14:79000001, elapsed 41.7s, est remaining 17.9s, peak mem 7318MB, user 1243.6s, sys 16.6s, output queue size 635 progress 75% @chr16:41000001, elapsed 45.1s, est remaining 15.0s, peak mem 7318MB, user 1328.7s, sys 17.3s, output queue size 797 progress 80% @chr18:1, elapsed 49.7s, est remaining 12.4s, peak mem 7318MB, user 1459.2s, sys 18.3s, output queue size 623 progress 85% @chr20:18000001, elapsed 53.1s, est remaining 9.4s, peak mem 7318MB, user 1573.4s, sys 19.1s, output queue size 785 progress 90% @chrX:32000001, elapsed 55.9s, est remaining 6.2s, peak mem 7331MB, user 1656.0s, sys 19.8s, output queue size 947 progress 95% @chrY:52000001, elapsed 58.0s, est remaining 3.1s, peak mem 7331MB, user 1737.1s, sys 20.5s, output queue size 675 progress 100% @chrX:67000001, elapsed 64.3s, est remaining 0.0s, peak mem 7372MB, user 1809.8s, sys 21.0s, output queue size 3540 sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: 1f8bfbff fffab20b extended: f1bf27eb 1b407f7e amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 max 192 algo: HsMetricAlgo license: sentieon:Metrics=31 input file size: 44707427019 reads: 902411031 contig: 3367 intervals 3217346917 bases advance: 3219322 calls 720.587 user 16.676 sys 735.272 real done: 1 calls 0.265 user 0.029 sys 0.303 real exec_no_coor: 1 calls 0.000 user 0.012 sys 0.021 real execute: 1 calls 0.003 user 0.001 sys 64.272 real idle: 223 calls 0.120 user 0.001 sys 190.561 real init: 1 calls 0.000 user 0.000 sys 0.000 real overall: 7731064832 mem 1811.637 user 21.497 sys 65.871 real