Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/e4d6dd05b0a3bbf2b1f02171e68527/.command.sh Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/BWAIndex Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/73/e53a6b3154dc7e2c251bf50374e4a7/1136_86S-T1-TDNA-1_A23MHWWLT4_1/1136_86S-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7d/e4d6dd05b0a3bbf2b1f02171e68527/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/73/e53a6b3154dc7e2c251bf50374e4a7/1136_86S-T1-TDNA-1_A23MHWWLT4_1/1136_86S-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz ==> STAGING COMPLETE (7 inputs) cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o 1136_86S-T1-TDNA-1_A23MHWWLT4_1.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. This software is licensed to bgold@natera.com by Sentieon Inc. version: sentieon-genomics-202308.03 [M::bwa_idx_load_from_disk] read 3171 ALT contigs [M::main_mem] bwa index loaded in 1620.640 CPU sec, 60.355 real sec [M::process] read 704708 sequences (100000175 bp) in 1.009 CPU sec, 1.027 real sec... [M::process] read 703708 sequences (100000268 bp) in 1.556 CPU sec, 1.580 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 290574, 17, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 265, 415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 871) [M::mem_pestat] mean and std.dev: (278.62, 168.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1099) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (248.34, 123.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (95, 218, 1965) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5705) [M::mem_pestat] mean and std.dev: (790.82, 1143.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7575) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 319, 557) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1257) [M::mem_pestat] mean and std.dev: (374.75, 247.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1607) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702620 sequences (100000054 bp) in 1.388 CPU sec, 1.433 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 290270, 26, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 285, 1276) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3526) [M::mem_pestat] mean and std.dev: (646.33, 852.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4651) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 228, 330) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 682) [M::mem_pestat] mean and std.dev: (251.94, 125.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 858) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (300, 829, 1108) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2724) [M::mem_pestat] mean and std.dev: (704.00, 499.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3532) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 252, 837) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2167) [M::mem_pestat] mean and std.dev: (406.67, 420.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2832) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701864 sequences (100000300 bp) in 1.364 CPU sec, 1.425 real sec... [M::mem_process_seqs] Processed 704708 reads in 151.776 CPU sec, 4.856 real sec [M::mem_process_seqs] Processed 703708 reads in 100.101 CPU sec, 3.217 real sec sorting block 0, #reads = 1090723 mem = 536877668 peak = 598323200 [M::process] read 701990 sequences (100000059 bp) in 1.911 CPU sec, 1.973 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 290183, 19, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 359, 703) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1799) [M::mem_pestat] mean and std.dev: (476.82, 447.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2347) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 232, 336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 696) [M::mem_pestat] mean and std.dev: (256.05, 127.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 876) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (501, 1104, 3137) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8409) [M::mem_pestat] mean and std.dev: (1612.84, 1470.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11045) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 375, 995) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2573) [M::mem_pestat] mean and std.dev: (475.27, 406.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3362) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701798 sequences (100000117 bp) in 1.400 CPU sec, 1.402 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 290217, 15, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 294, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 911) [M::mem_pestat] mean and std.dev: (308.47, 155.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1152) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 234, 340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 706) [M::mem_pestat] mean and std.dev: (258.57, 128.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 889) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (265, 551, 3563) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10159) [M::mem_pestat] mean and std.dev: (1307.20, 1515.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13457) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 224, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 765) [M::mem_pestat] mean and std.dev: (231.77, 104.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 962) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 289806, 20, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 264, 624) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1506) [M::mem_pestat] mean and std.dev: (325.31, 249.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1947) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 712) [M::mem_pestat] mean and std.dev: (259.76, 129.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 897) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (589, 2184, 3632) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9718) [M::mem_pestat] mean and std.dev: (2163.10, 1882.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12761) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 478, 2419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6793) [M::mem_pestat] mean and std.dev: (1336.84, 1743.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8980) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 702620 reads in 216.895 CPU sec, 6.985 real sec [M::mem_process_seqs] Processed 701864 reads in 165.230 CPU sec, 5.372 real sec sorting block 1, #reads = 1089995 mem = 536878881 peak = 727298048 [M::mem_process_seqs] Processed 701990 reads in 182.201 CPU sec, 5.925 real sec [M::process] read 701408 sequences (100000191 bp) in 2.028 CPU sec, 2.140 real sec... sorting block 2, #reads = 1089272 mem = 536879114 peak = 864657408 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 290164, 14, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (240, 324, 633) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1419) [M::mem_pestat] mean and std.dev: (323.14, 172.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1812) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 718) [M::mem_pestat] mean and std.dev: (260.61, 130.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 905) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (135, 1009, 1787) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5091) [M::mem_pestat] mean and std.dev: (1168.36, 1173.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6743) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (319, 461, 725) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1537) [M::mem_pestat] mean and std.dev: (444.00, 251.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1943) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701190 sequences (100000140 bp) in 1.827 CPU sec, 1.876 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 290014, 21, 38) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 262, 637) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1517) [M::mem_pestat] mean and std.dev: (337.53, 217.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1957) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 719) [M::mem_pestat] mean and std.dev: (261.32, 130.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 906) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (432, 1171, 3729) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10323) [M::mem_pestat] mean and std.dev: (2502.05, 2739.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13620) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 378, 919) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2311) [M::mem_pestat] mean and std.dev: (586.26, 571.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3007) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701074 sequences (100000273 bp) in 1.429 CPU sec, 1.426 real sec... [M::mem_process_seqs] Processed 701798 reads in 158.454 CPU sec, 5.019 real sec [M::mem_process_seqs] Processed 701408 reads in 103.732 CPU sec, 3.276 real sec sorting block 3, #reads = 1089210 mem = 536885261 peak = 864657408 [M::process] read 700218 sequences (100000274 bp) in 2.386 CPU sec, 2.493 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 289562, 19, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (253, 415, 878) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2128) [M::mem_pestat] mean and std.dev: (497.74, 370.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2753) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 699538 sequences (100000191 bp) in 1.800 CPU sec, 1.799 real sec... [M::mem_pestat] (25, 50, 75) percentile: (158, 239, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 731) [M::mem_pestat] mean and std.dev: (264.04, 132.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 922) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (22, 479, 723) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2125) [M::mem_pestat] mean and std.dev: (408.65, 341.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2826) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 329, 482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1048) [M::mem_pestat] mean and std.dev: (335.70, 180.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1331) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701074 reads in 88.110 CPU sec, 2.778 real sec sorting block 4, #reads = 1089310 mem = 536880544 peak = 864657408 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 289911, 21, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 314, 620) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1544) [M::mem_pestat] mean and std.dev: (415.78, 347.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2006) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 237, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 722) [M::mem_pestat] mean and std.dev: (262.39, 132.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 910) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (466, 588, 1595) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3853) [M::mem_pestat] mean and std.dev: (846.74, 792.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4982) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 284, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (259.40, 118.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 921) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 288930, 22, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 205, 294) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 590) [M::mem_pestat] mean and std.dev: (227.13, 102.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 738) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 240, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (265.34, 133.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (132, 432, 2347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6777) [M::mem_pestat] mean and std.dev: (1610.00, 2157.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10239) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 263, 474) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1060) [M::mem_pestat] mean and std.dev: (344.80, 259.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1382) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699312 sequences (100000117 bp) in 1.539 CPU sec, 1.547 real sec... [M::mem_process_seqs] Processed 701190 reads in 242.975 CPU sec, 7.704 real sec [M::mem_process_seqs] Processed 700218 reads in 120.017 CPU sec, 3.838 real sec sorting block 5, #reads = 1089028 mem = 536878770 peak = 864657408 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 289388, 15, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 297, 1079) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2955) [M::mem_pestat] mean and std.dev: (466.11, 494.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3893) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 242, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (267.34, 133.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (638, 1361, 2989) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7691) [M::mem_pestat] mean and std.dev: (2333.60, 2485.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12276) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 339, 1482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4040) [M::mem_pestat] mean and std.dev: (763.70, 863.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5319) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699046 sequences (100000120 bp) in 2.368 CPU sec, 2.739 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 289695, 16, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (269, 576, 1133) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2861) [M::mem_pestat] mean and std.dev: (630.24, 429.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3725) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 244, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 743) [M::mem_pestat] mean and std.dev: (268.75, 134.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 937) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (264, 744, 1032) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2568) [M::mem_pestat] mean and std.dev: (608.87, 418.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3336) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 352, 1155) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3119) [M::mem_pestat] mean and std.dev: (589.29, 574.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4101) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698624 sequences (100000232 bp) in 1.770 CPU sec, 1.772 real sec... [M::mem_process_seqs] Processed 699538 reads in 160.493 CPU sec, 5.085 real sec [M::mem_process_seqs] Processed 699312 reads in 105.742 CPU sec, 3.349 real sec sorting block 6, #reads = 1089255 mem = 536882667 peak = 864657408 [M::process] read 698776 sequences (100000203 bp) in 1.975 CPU sec, 2.076 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 288797, 21, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 267, 543) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1309) [M::mem_pestat] mean and std.dev: (341.80, 261.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1692) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 244, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (269.05, 134.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (422, 477, 5860) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 16736) [M::mem_pestat] mean and std.dev: (1898.00, 2465.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 22174) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 375, 736) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1780) [M::mem_pestat] mean and std.dev: (484.47, 421.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2302) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698802 sequences (100000039 bp) in 1.569 CPU sec, 1.570 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 289060, 27, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 253, 601) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1461) [M::mem_pestat] mean and std.dev: (339.93, 247.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1891) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 246, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (270.07, 135.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (387, 929, 1685) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4281) [M::mem_pestat] mean and std.dev: (1060.00, 851.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5579) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 287, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1176) [M::mem_pestat] mean and std.dev: (325.34, 229.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1520) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699046 reads in 162.496 CPU sec, 5.388 real sec sorting block 7, #reads = 1087991 mem = 536878907 peak = 864657408 [M::mem_process_seqs] Processed 698624 reads in 103.149 CPU sec, 3.285 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 289472, 33, 91) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 199, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 647) [M::mem_pestat] mean and std.dev: (209.44, 78.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 808) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 246, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 750) [M::mem_pestat] mean and std.dev: (270.25, 135.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 946) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (618, 1232, 1691) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3837) [M::mem_pestat] mean and std.dev: (944.33, 609.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4910) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 262, 556) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1252) [M::mem_pestat] mean and std.dev: (308.38, 207.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1600) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 8, #reads = 1087114 mem = 536881287 peak = 873172992 [M::process] read 698496 sequences (100000296 bp) in 2.373 CPU sec, 2.492 real sec... [M::process] read 697642 sequences (100000023 bp) in 1.597 CPU sec, 1.605 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 289461, 24, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 254, 463) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1045) [M::mem_pestat] mean and std.dev: (298.81, 174.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1336) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 245, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (269.80, 135.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (145, 418, 2687) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7771) [M::mem_pestat] mean and std.dev: (1387.00, 1817.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10313) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 258, 331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 579) [M::mem_pestat] mean and std.dev: (246.19, 89.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 703) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698776 reads in 159.926 CPU sec, 5.098 real sec [M::mem_process_seqs] Processed 698802 reads in 105.763 CPU sec, 3.364 real sec sorting block 9, #reads = 1087554 mem = 536882603 peak = 873172992 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 289367, 17, 39) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 217, 561) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1377) [M::mem_pestat] mean and std.dev: (321.94, 282.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1785) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 246, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 751) [M::mem_pestat] mean and std.dev: (271.30, 136.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 947) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (44, 44, 934) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2714) [M::mem_pestat] mean and std.dev: (456.27, 638.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3604) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 384, 1114) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2946) [M::mem_pestat] mean and std.dev: (590.20, 646.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3862) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697516 sequences (100000098 bp) in 2.231 CPU sec, 2.345 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 288562, 17, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (202, 268, 761) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1879) [M::mem_pestat] mean and std.dev: (458.68, 399.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2438) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 248, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (272.19, 135.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 944) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (279, 809, 1723) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4611) [M::mem_pestat] mean and std.dev: (999.47, 930.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6055) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 263, 643) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1545) [M::mem_pestat] mean and std.dev: (323.18, 224.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1996) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696902 sequences (100000100 bp) in 1.855 CPU sec, 1.864 real sec... [M::mem_process_seqs] Processed 698496 reads in 152.014 CPU sec, 4.824 real sec [M::mem_process_seqs] Processed 697642 reads in 101.379 CPU sec, 3.201 real sec sorting block 10, #reads = 1087626 mem = 536879237 peak = 873172992 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 288528, 11, 94) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 274, 682) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1652) [M::mem_pestat] mean and std.dev: (401.33, 284.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2137) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 250, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 753) [M::mem_pestat] mean and std.dev: (272.89, 135.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (334, 334, 1320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3292) [M::mem_pestat] mean and std.dev: (754.27, 754.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4278) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (237, 334, 538) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1140) [M::mem_pestat] mean and std.dev: (330.35, 154.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1441) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696492 sequences (100000212 bp) in 2.668 CPU sec, 2.777 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 288180, 7, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 268, 841) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2187) [M::mem_pestat] mean and std.dev: (370.22, 379.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2860) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 251, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 757) [M::mem_pestat] mean and std.dev: (274.58, 135.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 954) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 298, 492) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1120) [M::mem_pestat] mean and std.dev: (305.33, 185.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1434) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 696086 sequences (100000194 bp) in 1.519 CPU sec, 1.519 real sec... [M::mem_process_seqs] Processed 697516 reads in 148.967 CPU sec, 4.718 real sec sorting block 11, #reads = 1087231 mem = 536878203 peak = 873172992 [M::mem_process_seqs] Processed 696902 reads in 98.408 CPU sec, 3.111 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (74, 287984, 15, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 265, 542) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1240) [M::mem_pestat] mean and std.dev: (327.84, 216.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1589) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 251, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (272.78, 133.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 938) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (721, 721, 1199) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2155) [M::mem_pestat] mean and std.dev: (783.71, 412.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2633) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (158, 210, 795) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2069) [M::mem_pestat] mean and std.dev: (288.29, 235.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2706) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696008 sequences (100000256 bp) in 2.473 CPU sec, 2.591 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 288371, 11, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 235, 895) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2349) [M::mem_pestat] mean and std.dev: (314.60, 315.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3076) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 253, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 752) [M::mem_pestat] mean and std.dev: (274.55, 134.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 947) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (551, 968, 3234) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8600) [M::mem_pestat] mean and std.dev: (1358.30, 1208.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11283) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 317, 1515) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4197) [M::mem_pestat] mean and std.dev: (787.06, 1025.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5538) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696492 reads in 150.569 CPU sec, 4.779 real sec sorting block 12, #reads = 1085504 mem = 536886613 peak = 873172992 [M::process] read 696062 sequences (100000193 bp) in 1.893 CPU sec, 1.898 real sec... [M::mem_process_seqs] Processed 696086 reads in 107.579 CPU sec, 3.413 real sec sorting block 13, #reads = 1085249 mem = 536883391 peak = 873172992 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 288240, 32, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 304, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1070) [M::mem_pestat] mean and std.dev: (286.29, 166.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1367) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 252, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 752) [M::mem_pestat] mean and std.dev: (274.56, 134.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 947) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (246, 775, 4430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12798) [M::mem_pestat] mean and std.dev: (2442.22, 3112.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 16982) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 351, 962) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2520) [M::mem_pestat] mean and std.dev: (445.88, 414.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3299) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696224 sequences (100000077 bp) in 2.348 CPU sec, 2.464 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 288054, 15, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 380, 739) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1811) [M::mem_pestat] mean and std.dev: (360.42, 240.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2347) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 252, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (274.59, 135.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 943) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (744, 878, 1136) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1920) [M::mem_pestat] mean and std.dev: (761.29, 363.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2312) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 227, 405) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 859) [M::mem_pestat] mean and std.dev: (277.90, 169.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1086) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696292 sequences (100000135 bp) in 1.560 CPU sec, 1.562 real sec... [M::mem_process_seqs] Processed 696008 reads in 154.801 CPU sec, 4.932 real sec [M::mem_process_seqs] Processed 696062 reads in 104.789 CPU sec, 3.326 real sec sorting block 14, #reads = 1084786 mem = 536877997 peak = 873172992 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 288361, 31, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 249, 502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1194) [M::mem_pestat] mean and std.dev: (253.08, 154.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1540) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 250, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (271.95, 132.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 931) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (651, 988, 1589) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3465) [M::mem_pestat] mean and std.dev: (1028.57, 815.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4403) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 247, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 692) [M::mem_pestat] mean and std.dev: (235.12, 89.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 865) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696182 sequences (100000236 bp) in 2.469 CPU sec, 2.592 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 288414, 22, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 292, 614) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1528) [M::mem_pestat] mean and std.dev: (355.68, 287.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1985) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 248, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 733) [M::mem_pestat] mean and std.dev: (270.34, 131.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 922) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (64, 900, 2468) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7276) [M::mem_pestat] mean and std.dev: (1549.18, 1995.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9680) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 325, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1162) [M::mem_pestat] mean and std.dev: (325.43, 182.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1480) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696170 sequences (100000041 bp) in 1.530 CPU sec, 1.528 real sec... [M::mem_process_seqs] Processed 696224 reads in 149.262 CPU sec, 4.735 real sec [M::mem_process_seqs] Processed 696292 reads in 99.277 CPU sec, 3.137 real sec sorting block 15, #reads = 1083589 mem = 536877284 peak = 873172992 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 288191, 31, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 284, 713) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1831) [M::mem_pestat] mean and std.dev: (330.77, 268.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2390) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 248, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 730) [M::mem_pestat] mean and std.dev: (270.05, 131.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 918) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (109, 589, 2327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6763) [M::mem_pestat] mean and std.dev: (1086.55, 1276.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8981) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 364, 566) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1248) [M::mem_pestat] mean and std.dev: (353.12, 213.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1589) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695606 sequences (100000009 bp) in 2.587 CPU sec, 2.692 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 288240, 26, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 278, 532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1274) [M::mem_pestat] mean and std.dev: (363.20, 305.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1645) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 249, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 730) [M::mem_pestat] mean and std.dev: (270.35, 131.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 918) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (431, 602, 1324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3110) [M::mem_pestat] mean and std.dev: (755.17, 671.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4003) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (249, 326, 669) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1509) [M::mem_pestat] mean and std.dev: (414.15, 308.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1929) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696232 sequences (100000097 bp) in 1.548 CPU sec, 1.555 real sec... [M::mem_process_seqs] Processed 696182 reads in 152.759 CPU sec, 4.841 real sec sorting block 16, #reads = 1084167 mem = 536879752 peak = 873172992 [M::process] read 695864 sequences (100000208 bp) in 1.763 CPU sec, 1.780 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 287675, 24, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 259, 476) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1032) [M::mem_pestat] mean and std.dev: (282.55, 176.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1310) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (168, 252, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 750) [M::mem_pestat] mean and std.dev: (274.84, 134.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 944) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (407, 1235, 1692) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4262) [M::mem_pestat] mean and std.dev: (997.41, 825.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5547) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 273, 563) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1289) [M::mem_pestat] mean and std.dev: (359.30, 229.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1652) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695606 reads in 90.584 CPU sec, 3.147 real sec sorting block 17, #reads = 1082508 mem = 536878006 peak = 873172992 [M::mem_process_seqs] Processed 696170 reads in 218.969 CPU sec, 7.236 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 287974, 28, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 249, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 808) [M::mem_pestat] mean and std.dev: (262.51, 158.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1021) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 250, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 748) [M::mem_pestat] mean and std.dev: (273.39, 134.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (273, 546, 935) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2259) [M::mem_pestat] mean and std.dev: (496.44, 380.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2921) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 294, 748) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1806) [M::mem_pestat] mean and std.dev: (494.43, 423.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2335) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695902 sequences (100000051 bp) in 2.547 CPU sec, 2.656 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 288115, 18, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 352, 545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1223) [M::mem_pestat] mean and std.dev: (359.14, 227.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1562) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 250, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (273.92, 134.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 943) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (104, 523, 760) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2072) [M::mem_pestat] mean and std.dev: (424.39, 380.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2728) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (166, 223, 410) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 898) [M::mem_pestat] mean and std.dev: (240.26, 145.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1142) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696232 reads in 168.217 CPU sec, 5.345 real sec [M::mem_process_seqs] Processed 695864 reads in 101.528 CPU sec, 3.201 real sec sorting block 18, #reads = 1083190 mem = 536880958 peak = 873172992 [M::process] read 701312 sequences (100000192 bp) in 2.263 CPU sec, 2.354 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 287731, 14, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (224, 317, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (347.44, 201.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1154) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 251, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 755) [M::mem_pestat] mean and std.dev: (275.15, 136.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 951) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (147, 627, 889) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2373) [M::mem_pestat] mean and std.dev: (491.79, 333.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3115) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 367, 675) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1589) [M::mem_pestat] mean and std.dev: (389.47, 239.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2046) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 19, #reads = 1082907 mem = 536881201 peak = 893562880 [M::process] read 703956 sequences (100000030 bp) in 2.404 CPU sec, 2.513 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 289378, 11, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 268, 796) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2036) [M::mem_pestat] mean and std.dev: (408.40, 386.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2656) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 343) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 715) [M::mem_pestat] mean and std.dev: (260.51, 130.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 901) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (771, 818, 1178) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1992) [M::mem_pestat] mean and std.dev: (692.11, 440.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2454) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 288, 437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 945) [M::mem_pestat] mean and std.dev: (322.83, 199.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1199) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695902 reads in 156.360 CPU sec, 4.957 real sec [M::process] read 703042 sequences (100000083 bp) in 1.911 CPU sec, 1.915 real sec... [M::mem_process_seqs] Processed 701312 reads in 104.554 CPU sec, 3.300 real sec sorting block 20, #reads = 1082080 mem = 536876473 peak = 893562880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 291057, 25, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 266, 571) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1327) [M::mem_pestat] mean and std.dev: (319.66, 242.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1705) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 227, 331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 687) [M::mem_pestat] mean and std.dev: (252.55, 126.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 865) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (218, 709, 2306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6482) [M::mem_pestat] mean and std.dev: (1005.04, 1036.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8570) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 273, 650) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1604) [M::mem_pestat] mean and std.dev: (365.05, 286.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2081) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701932 sequences (100000158 bp) in 2.368 CPU sec, 2.496 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 290372, 15, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 271, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1155) [M::mem_pestat] mean and std.dev: (363.60, 233.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1469) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 231, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 701) [M::mem_pestat] mean and std.dev: (255.84, 128.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 883) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (89, 179, 1070) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3032) [M::mem_pestat] mean and std.dev: (530.73, 565.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4013) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 318, 979) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2619) [M::mem_pestat] mean and std.dev: (575.31, 528.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3439) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701754 sequences (100000020 bp) in 1.410 CPU sec, 1.403 real sec... [M::mem_process_seqs] Processed 703956 reads in 151.657 CPU sec, 4.820 real sec [M::mem_process_seqs] Processed 703042 reads in 98.884 CPU sec, 3.133 real sec sorting block 21, #reads = 1090784 mem = 536885946 peak = 893562880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 290250, 15, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 279, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1003) [M::mem_pestat] mean and std.dev: (269.53, 127.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1274) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 234, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 709) [M::mem_pestat] mean and std.dev: (258.98, 129.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 893) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (407, 685, 2297) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6077) [M::mem_pestat] mean and std.dev: (1317.60, 1208.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7967) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 302, 555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1315) [M::mem_pestat] mean and std.dev: (320.26, 215.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1695) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701506 sequences (100000053 bp) in 2.721 CPU sec, 2.835 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 289588, 37, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 296, 1268) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3466) [M::mem_pestat] mean and std.dev: (651.85, 648.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4565) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 712) [M::mem_pestat] mean and std.dev: (259.75, 129.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 897) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (304, 510, 1155) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2857) [M::mem_pestat] mean and std.dev: (543.00, 349.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3708) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 279, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 952) [M::mem_pestat] mean and std.dev: (279.84, 170.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1208) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701932 reads in 147.536 CPU sec, 4.683 real sec [M::mem_process_seqs] Processed 701754 reads in 97.240 CPU sec, 3.062 real sec [M::process] read 701420 sequences (100000155 bp) in 2.098 CPU sec, 2.156 real sec... sorting block 22, #reads = 1090786 mem = 536877858 peak = 893562880 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 289975, 19, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (146, 195, 534) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1310) [M::mem_pestat] mean and std.dev: (327.00, 326.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1698) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 236, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 718) [M::mem_pestat] mean and std.dev: (260.95, 130.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 905) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (658, 1221, 1221) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2347) [M::mem_pestat] mean and std.dev: (962.61, 429.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2910) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 271, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 845) [M::mem_pestat] mean and std.dev: (294.80, 152.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1062) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701102 sequences (100000256 bp) in 2.144 CPU sec, 2.248 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 290686, 11, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 338, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 928) [M::mem_pestat] mean and std.dev: (312.14, 167.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1177) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 719) [M::mem_pestat] mean and std.dev: (261.41, 130.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 906) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (330, 515, 833) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1839) [M::mem_pestat] mean and std.dev: (569.18, 390.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2342) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 297, 418) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 930) [M::mem_pestat] mean and std.dev: (270.25, 131.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1186) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701506 reads in 140.943 CPU sec, 4.488 real sec sorting block 23, #reads = 1090392 mem = 536881065 peak = 893562880 [M::process] read 700872 sequences (100000031 bp) in 1.575 CPU sec, 1.589 real sec... [M::mem_process_seqs] Processed 701420 reads in 93.031 CPU sec, 2.930 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 289548, 15, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 303, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 634) [M::mem_pestat] mean and std.dev: (274.70, 94.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 779) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 238, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (263.34, 132.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 918) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (889, 900, 2544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5854) [M::mem_pestat] mean and std.dev: (1190.50, 760.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7509) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 305, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 942) [M::mem_pestat] mean and std.dev: (312.22, 157.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1178) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 24, #reads = 1090143 mem = 536885507 peak = 1001058304 [M::process] read 700384 sequences (100000172 bp) in 3.120 CPU sec, 3.252 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 289986, 20, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 228, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 711) [M::mem_pestat] mean and std.dev: (257.42, 130.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 892) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 239, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 726) [M::mem_pestat] mean and std.dev: (263.99, 132.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 915) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (181, 418, 819) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2095) [M::mem_pestat] mean and std.dev: (462.39, 309.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2733) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 320, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1072) [M::mem_pestat] mean and std.dev: (318.06, 185.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1364) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701102 reads in 141.662 CPU sec, 4.503 real sec [M::mem_process_seqs] Processed 700872 reads in 94.648 CPU sec, 2.984 real sec [M::process] read 700306 sequences (100000178 bp) in 1.911 CPU sec, 1.993 real sec... sorting block 25, #reads = 1089623 mem = 536879220 peak = 1001058304 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 289398, 12, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 299, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1221) [M::mem_pestat] mean and std.dev: (305.77, 185.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1575) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 240, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (265.38, 133.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (499, 643, 1690) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4072) [M::mem_pestat] mean and std.dev: (890.67, 748.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5263) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 246, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1006) [M::mem_pestat] mean and std.dev: (306.31, 205.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1282) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699842 sequences (100000059 bp) in 2.124 CPU sec, 2.227 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 289863, 12, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 244, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 722) [M::mem_pestat] mean and std.dev: (238.84, 95.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 903) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 239, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 732) [M::mem_pestat] mean and std.dev: (265.18, 133.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 923) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (375, 696, 1963) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5139) [M::mem_pestat] mean and std.dev: (668.40, 526.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6727) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (144, 255, 616) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1560) [M::mem_pestat] mean and std.dev: (407.15, 394.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2032) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700384 reads in 145.905 CPU sec, 4.636 real sec [M::process] read 699220 sequences (100000128 bp) in 1.655 CPU sec, 1.671 real sec... [M::mem_process_seqs] Processed 700306 reads in 98.098 CPU sec, 3.088 real sec sorting block 26, #reads = 1090458 mem = 536880176 peak = 1001058304 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 289341, 16, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 196, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 801) [M::mem_pestat] mean and std.dev: (242.28, 158.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1020) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 241, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 733) [M::mem_pestat] mean and std.dev: (265.57, 132.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 924) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (60, 815, 2229) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6567) [M::mem_pestat] mean and std.dev: (1351.44, 1590.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8736) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 226, 454) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1054) [M::mem_pestat] mean and std.dev: (264.59, 166.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1354) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698966 sequences (100000075 bp) in 2.513 CPU sec, 2.648 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 289323, 21, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 304, 1295) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3543) [M::mem_pestat] mean and std.dev: (583.00, 660.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4667) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 243, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (267.01, 132.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (449, 1435, 1725) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4277) [M::mem_pestat] mean and std.dev: (1310.15, 885.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5553) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 225, 401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 837) [M::mem_pestat] mean and std.dev: (269.33, 156.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1055) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699842 reads in 141.929 CPU sec, 4.518 real sec sorting block 27, #reads = 1088738 mem = 536881492 peak = 1001058304 [M::process] read 698664 sequences (100000081 bp) in 2.161 CPU sec, 2.234 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 288680, 14, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (229, 314, 752) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1798) [M::mem_pestat] mean and std.dev: (533.21, 428.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2321) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 244, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 741) [M::mem_pestat] mean and std.dev: (268.24, 133.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (258, 652, 929) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2271) [M::mem_pestat] mean and std.dev: (586.08, 434.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2942) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 296, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 932) [M::mem_pestat] mean and std.dev: (328.12, 181.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1167) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698574 sequences (100000072 bp) in 1.450 CPU sec, 1.453 real sec... [M::mem_process_seqs] Processed 698966 reads in 84.196 CPU sec, 2.676 real sec sorting block 28, #reads = 1088157 mem = 536881737 peak = 1001058304 [M::mem_process_seqs] Processed 699220 reads in 198.730 CPU sec, 6.295 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 288917, 18, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 381, 807) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2055) [M::mem_pestat] mean and std.dev: (498.04, 395.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2679) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 245, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (269.39, 134.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 938) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (893, 1008, 2511) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5747) [M::mem_pestat] mean and std.dev: (1446.33, 1036.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7365) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 389, 751) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1907) [M::mem_pestat] mean and std.dev: (383.23, 319.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2485) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698414 sequences (100000120 bp) in 2.335 CPU sec, 2.436 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 289165, 22, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 251, 635) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1611) [M::mem_pestat] mean and std.dev: (351.71, 315.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2099) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 244, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (269.20, 134.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 938) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (120, 573, 1323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3729) [M::mem_pestat] mean and std.dev: (717.70, 766.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4932) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 284, 513) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1197) [M::mem_pestat] mean and std.dev: (278.94, 156.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1539) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698664 reads in 159.836 CPU sec, 5.059 real sec [M::mem_process_seqs] Processed 698574 reads in 95.959 CPU sec, 3.019 real sec [M::process] read 698258 sequences (100000069 bp) in 1.787 CPU sec, 1.832 real sec... sorting block 29, #reads = 1087659 mem = 536878794 peak = 1001058304 sorting block 30, #reads = 1087604 mem = 536878027 peak = 1001058304 [M::process] read 698226 sequences (100000284 bp) in 2.124 CPU sec, 2.222 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 288907, 27, 86) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 208, 540) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1348) [M::mem_pestat] mean and std.dev: (308.36, 239.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1752) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 246, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 748) [M::mem_pestat] mean and std.dev: (270.41, 134.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 943) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (312, 900, 2496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6864) [M::mem_pestat] mean and std.dev: (1377.70, 1461.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9048) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 407, 589) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1379) [M::mem_pestat] mean and std.dev: (406.05, 307.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1774) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697796 sequences (100000173 bp) in 1.429 CPU sec, 1.433 real sec... [M::mem_process_seqs] Processed 698258 reads in 79.173 CPU sec, 2.487 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 288928, 20, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 263, 457) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1051) [M::mem_pestat] mean and std.dev: (281.83, 149.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1348) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 246, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (270.16, 134.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 939) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (689, 915, 1560) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3302) [M::mem_pestat] mean and std.dev: (1090.85, 764.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4173) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 252, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1090) [M::mem_pestat] mean and std.dev: (291.57, 160.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1391) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 288504, 13, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 304, 753) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1881) [M::mem_pestat] mean and std.dev: (469.97, 409.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2445) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 245, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (270.02, 135.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 935) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (91, 728, 1502) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4324) [M::mem_pestat] mean and std.dev: (596.00, 513.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5735) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 313, 632) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1444) [M::mem_pestat] mean and std.dev: (403.96, 273.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1850) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698414 reads in 217.794 CPU sec, 6.908 real sec [M::process] read 697592 sequences (100000003 bp) in 1.953 CPU sec, 1.956 real sec... sorting block 31, #reads = 1087690 mem = 536881876 peak = 1001058304 [M::mem_process_seqs] Processed 698226 reads in 110.272 CPU sec, 3.492 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 289224, 32, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 204, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1098) [M::mem_pestat] mean and std.dev: (315.53, 236.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1415) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 247, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (271.05, 134.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (302, 1451, 2356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6464) [M::mem_pestat] mean and std.dev: (1243.82, 1112.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8518) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (168, 306, 1536) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4272) [M::mem_pestat] mean and std.dev: (567.97, 802.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5640) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 32, #reads = 1085549 mem = 536882807 peak = 1001058304 [M::process] read 696798 sequences (100000270 bp) in 2.382 CPU sec, 2.476 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 287409, 15, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 256, 648) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1534) [M::mem_pestat] mean and std.dev: (303.98, 195.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1977) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 248, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (271.24, 134.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 944) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (173, 402, 1497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4145) [M::mem_pestat] mean and std.dev: (636.00, 623.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5469) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 324, 976) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2520) [M::mem_pestat] mean and std.dev: (547.96, 504.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3292) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697796 reads in 147.340 CPU sec, 4.888 real sec [M::process] read 697006 sequences (100000074 bp) in 1.790 CPU sec, 1.797 real sec... [M::mem_process_seqs] Processed 697592 reads in 97.808 CPU sec, 3.086 real sec sorting block 33, #reads = 1086515 mem = 536877633 peak = 1001058304 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 288691, 13, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 239, 378) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 782) [M::mem_pestat] mean and std.dev: (250.25, 107.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 984) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 250, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (272.56, 134.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (112, 230, 2624) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7648) [M::mem_pestat] mean and std.dev: (1169.31, 1296.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10160) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 268, 976) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2502) [M::mem_pestat] mean and std.dev: (425.25, 393.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3265) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696956 sequences (100000068 bp) in 2.403 CPU sec, 2.520 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 288677, 24, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (137, 216, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 704) [M::mem_pestat] mean and std.dev: (218.73, 100.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 893) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 741) [M::mem_pestat] mean and std.dev: (270.95, 133.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 933) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (263, 443, 1288) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3338) [M::mem_pestat] mean and std.dev: (678.30, 699.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4363) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (215, 373, 1488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4034) [M::mem_pestat] mean and std.dev: (739.90, 827.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5307) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696798 reads in 148.907 CPU sec, 4.717 real sec [M::process] read 696990 sequences (100000015 bp) in 1.905 CPU sec, 1.908 real sec... [M::mem_process_seqs] Processed 697006 reads in 97.511 CPU sec, 3.069 real sec sorting block 34, #reads = 1085513 mem = 536881465 peak = 1001058304 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 288166, 12, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 199, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 738) [M::mem_pestat] mean and std.dev: (229.92, 96.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 926) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 247, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 738) [M::mem_pestat] mean and std.dev: (270.76, 133.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (566, 1714, 2432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6164) [M::mem_pestat] mean and std.dev: (1523.08, 1211.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8030) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 255, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 653) [M::mem_pestat] mean and std.dev: (237.48, 79.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 805) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697044 sequences (100000168 bp) in 2.474 CPU sec, 2.576 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 288242, 14, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 286, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1096) [M::mem_pestat] mean and std.dev: (312.76, 180.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1400) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 247, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (270.30, 132.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 925) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (104, 543, 603) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1601) [M::mem_pestat] mean and std.dev: (437.23, 329.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2100) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 268, 442) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 956) [M::mem_pestat] mean and std.dev: (271.20, 127.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1213) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696956 reads in 143.296 CPU sec, 4.744 real sec [M::process] read 696524 sequences (100000234 bp) in 1.926 CPU sec, 1.939 real sec... [M::mem_process_seqs] Processed 696990 reads in 95.566 CPU sec, 3.007 real sec sorting block 35, #reads = 1085878 mem = 536882178 peak = 1001058304 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 288583, 14, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 334, 717) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1741) [M::mem_pestat] mean and std.dev: (387.03, 301.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2253) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 246, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (270.13, 133.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 932) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (231, 1003, 1159) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3015) [M::mem_pestat] mean and std.dev: (680.08, 438.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3943) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 317, 455) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 941) [M::mem_pestat] mean and std.dev: (303.63, 153.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1184) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696540 sequences (100000227 bp) in 2.224 CPU sec, 2.327 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 288406, 24, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 250, 444) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 976) [M::mem_pestat] mean and std.dev: (308.57, 185.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1242) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (270.50, 132.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 925) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (260, 1217, 1936) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5288) [M::mem_pestat] mean and std.dev: (1108.87, 936.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6964) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 282, 397) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 779) [M::mem_pestat] mean and std.dev: (283.02, 108.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 970) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697044 reads in 142.797 CPU sec, 4.543 real sec [M::process] read 696290 sequences (100000161 bp) in 1.606 CPU sec, 1.606 real sec... sorting block 36, #reads = 1084631 mem = 536880979 peak = 1001058304 [M::mem_process_seqs] Processed 696524 reads in 94.634 CPU sec, 2.988 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 288630, 25, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 367, 782) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1954) [M::mem_pestat] mean and std.dev: (526.16, 442.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2540) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 248, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 730) [M::mem_pestat] mean and std.dev: (269.94, 131.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 918) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (576, 1511, 3896) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10536) [M::mem_pestat] mean and std.dev: (2713.20, 2790.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13875) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 259, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 872) [M::mem_pestat] mean and std.dev: (264.70, 124.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1111) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 37, #reads = 1086069 mem = 536883782 peak = 1034117120 [M::process] read 695970 sequences (100000066 bp) in 2.570 CPU sec, 2.687 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 288928, 29, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 265, 725) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1843) [M::mem_pestat] mean and std.dev: (412.81, 369.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2402) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 249, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (272.39, 134.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 938) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (714, 1453, 5630) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 15462) [M::mem_pestat] mean and std.dev: (2910.07, 2851.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 20378) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 289, 514) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1070) [M::mem_pestat] mean and std.dev: (317.09, 166.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1348) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696602 sequences (100000178 bp) in 1.469 CPU sec, 1.471 real sec... [M::mem_process_seqs] Processed 696540 reads in 146.784 CPU sec, 4.658 real sec [M::process] read 696262 sequences (100000143 bp) in 1.543 CPU sec, 1.545 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (36, 288107, 26, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 307, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 845) [M::mem_pestat] mean and std.dev: (301.25, 141.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1055) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 249, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (272.15, 133.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (96, 503, 1775) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5133) [M::mem_pestat] mean and std.dev: (785.13, 1013.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6812) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 316, 626) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1502) [M::mem_pestat] mean and std.dev: (408.67, 289.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1940) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695970 reads in 87.763 CPU sec, 3.044 real sec sorting block 38, #reads = 1085596 mem = 536880093 peak = 1034117120 [M::mem_process_seqs] Processed 696290 reads in 209.749 CPU sec, 6.914 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (47, 288127, 18, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (214, 275, 370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 682) [M::mem_pestat] mean and std.dev: (262.32, 105.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 838) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 249, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 751) [M::mem_pestat] mean and std.dev: (273.45, 135.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 946) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (318, 1747, 2327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6345) [M::mem_pestat] mean and std.dev: (1537.65, 1335.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8354) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 330, 959) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2439) [M::mem_pestat] mean and std.dev: (508.68, 388.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3179) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 39, #reads = 1084730 mem = 536877478 peak = 1034117120 [M::process] read 696168 sequences (100000052 bp) in 2.754 CPU sec, 2.868 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 288498, 49, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 332, 712) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1808) [M::mem_pestat] mean and std.dev: (359.59, 267.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2356) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 250, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 751) [M::mem_pestat] mean and std.dev: (273.93, 136.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 946) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (399, 1091, 2273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6021) [M::mem_pestat] mean and std.dev: (1353.33, 1427.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7895) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 321, 461) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1055) [M::mem_pestat] mean and std.dev: (351.96, 260.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1395) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696602 reads in 165.830 CPU sec, 5.268 real sec [M::mem_process_seqs] Processed 696262 reads in 100.061 CPU sec, 3.149 real sec [M::process] read 703656 sequences (100000041 bp) in 2.537 CPU sec, 2.650 real sec... sorting block 40, #reads = 1085828 mem = 536878423 peak = 1034117120 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 288424, 11, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 266, 379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 765) [M::mem_pestat] mean and std.dev: (257.50, 120.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 958) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 251, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 752) [M::mem_pestat] mean and std.dev: (275.03, 136.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 947) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (501, 756, 1420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3258) [M::mem_pestat] mean and std.dev: (695.00, 347.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4177) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 353, 3077) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8853) [M::mem_pestat] mean and std.dev: (1770.37, 2518.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11846) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704014 sequences (100000076 bp) in 2.366 CPU sec, 2.464 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 290718, 18, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (132, 210, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 690) [M::mem_pestat] mean and std.dev: (198.11, 93.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 876) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 228, 331) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 685) [M::mem_pestat] mean and std.dev: (251.87, 125.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 862) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (395, 969, 2255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5975) [M::mem_pestat] mean and std.dev: (1194.00, 1212.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7835) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 277, 645) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1491) [M::mem_pestat] mean and std.dev: (374.86, 270.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1914) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696168 reads in 150.453 CPU sec, 4.775 real sec [M::mem_process_seqs] Processed 703656 reads in 101.440 CPU sec, 3.193 real sec [M::process] read 702464 sequences (100000016 bp) in 2.226 CPU sec, 2.279 real sec... sorting block 41, #reads = 1084724 mem = 536879316 peak = 1034117120 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 290744, 21, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 327, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1197) [M::mem_pestat] mean and std.dev: (364.81, 261.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1534) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 227, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 681) [M::mem_pestat] mean and std.dev: (251.12, 124.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 857) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (489, 652, 854) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1584) [M::mem_pestat] mean and std.dev: (519.88, 253.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1949) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 360, 872) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2182) [M::mem_pestat] mean and std.dev: (380.29, 264.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2837) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701644 sequences (100000041 bp) in 2.349 CPU sec, 2.441 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 289727, 13, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (202, 350, 554) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1258) [M::mem_pestat] mean and std.dev: (374.99, 220.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1610) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 233, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 705) [M::mem_pestat] mean and std.dev: (257.43, 128.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 888) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (391, 878, 1517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3769) [M::mem_pestat] mean and std.dev: (1094.38, 970.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4975) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 235, 781) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1999) [M::mem_pestat] mean and std.dev: (484.78, 481.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2608) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704014 reads in 150.706 CPU sec, 4.786 real sec [M::mem_process_seqs] Processed 702464 reads in 98.672 CPU sec, 3.104 real sec [M::process] read 700834 sequences (100000103 bp) in 1.955 CPU sec, 1.982 real sec... sorting block 42, #reads = 1089699 mem = 536880670 peak = 1034117120 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 290227, 19, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 232, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 617) [M::mem_pestat] mean and std.dev: (225.47, 97.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 772) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 712) [M::mem_pestat] mean and std.dev: (259.72, 129.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 897) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (174, 1300, 2125) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6027) [M::mem_pestat] mean and std.dev: (1431.89, 1395.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7978) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 374, 637) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1525) [M::mem_pestat] mean and std.dev: (428.70, 305.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1969) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 43, #reads = 1090013 mem = 536889314 peak = 1034117120 [M::process] read 700660 sequences (100000088 bp) in 2.123 CPU sec, 2.205 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 289575, 21, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 290, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1259) [M::mem_pestat] mean and std.dev: (352.72, 241.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1619) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 238, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 720) [M::mem_pestat] mean and std.dev: (262.59, 130.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 907) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (483, 1197, 1324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3006) [M::mem_pestat] mean and std.dev: (1061.19, 657.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3847) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 296, 579) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1325) [M::mem_pestat] mean and std.dev: (372.45, 259.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1698) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700450 sequences (100000070 bp) in 1.390 CPU sec, 1.393 real sec... [M::mem_process_seqs] Processed 701644 reads in 145.429 CPU sec, 4.630 real sec [M::mem_process_seqs] Processed 700834 reads in 95.560 CPU sec, 3.023 real sec sorting block 44, #reads = 1090030 mem = 536884824 peak = 1034117120 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 289472, 28, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (169, 260, 484) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1114) [M::mem_pestat] mean and std.dev: (344.79, 249.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1429) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 239, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 720) [M::mem_pestat] mean and std.dev: (262.82, 131.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 907) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (478, 1029, 1065) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2239) [M::mem_pestat] mean and std.dev: (795.96, 461.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2826) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 277, 572) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1316) [M::mem_pestat] mean and std.dev: (359.09, 239.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1688) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700006 sequences (100000102 bp) in 2.293 CPU sec, 2.394 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 289537, 11, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 390, 983) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2557) [M::mem_pestat] mean and std.dev: (538.14, 464.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3344) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 239, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 729) [M::mem_pestat] mean and std.dev: (264.20, 132.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 919) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (711, 1371, 1415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2823) [M::mem_pestat] mean and std.dev: (858.22, 530.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3527) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (209, 309, 1412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3818) [M::mem_pestat] mean and std.dev: (513.22, 578.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5021) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700660 reads in 143.532 CPU sec, 4.553 real sec [M::process] read 699652 sequences (100000077 bp) in 1.844 CPU sec, 1.847 real sec... [M::mem_process_seqs] Processed 700450 reads in 94.780 CPU sec, 2.983 real sec sorting block 45, #reads = 1088621 mem = 536881339 peak = 1034117120 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 289723, 25, 35) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 345, 847) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2189) [M::mem_pestat] mean and std.dev: (412.85, 372.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2860) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 241, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (266.39, 133.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 928) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (875, 1962, 3164) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7742) [M::mem_pestat] mean and std.dev: (1966.24, 1224.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10031) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 283, 1048) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2738) [M::mem_pestat] mean and std.dev: (475.97, 464.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3583) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699576 sequences (100000244 bp) in 2.123 CPU sec, 2.211 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 289306, 13, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 240, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1041) [M::mem_pestat] mean and std.dev: (298.61, 209.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1342) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 242, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (267.17, 134.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (43, 554, 3975) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 11839) [M::mem_pestat] mean and std.dev: (1916.69, 2368.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 15771) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 301, 540) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1260) [M::mem_pestat] mean and std.dev: (348.86, 226.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1620) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699164 sequences (100000145 bp) in 1.400 CPU sec, 1.401 real sec... [M::mem_process_seqs] Processed 700006 reads in 145.539 CPU sec, 4.693 real sec [M::mem_process_seqs] Processed 699652 reads in 96.226 CPU sec, 3.059 real sec sorting block 46, #reads = 1087720 mem = 536885781 peak = 1034117120 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 290057, 25, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 299, 885) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2323) [M::mem_pestat] mean and std.dev: (525.29, 523.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3042) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 242, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (268.00, 135.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (451, 1503, 3204) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8710) [M::mem_pestat] mean and std.dev: (1738.16, 1683.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11463) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 255, 402) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 872) [M::mem_pestat] mean and std.dev: (232.22, 110.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1107) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698804 sequences (100000267 bp) in 2.419 CPU sec, 2.529 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 289708, 16, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 258, 614) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1460) [M::mem_pestat] mean and std.dev: (316.46, 249.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1883) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 244, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (269.27, 135.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (371, 1853, 2827) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7739) [M::mem_pestat] mean and std.dev: (1437.20, 1245.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10195) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 269, 1031) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2723) [M::mem_pestat] mean and std.dev: (677.74, 687.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3569) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698502 sequences (100000056 bp) in 1.450 CPU sec, 1.444 real sec... [M::mem_process_seqs] Processed 699576 reads in 142.655 CPU sec, 4.520 real sec sorting block 47, #reads = 1088319 mem = 536879007 peak = 1034117120 [M::mem_process_seqs] Processed 699164 reads in 96.044 CPU sec, 3.036 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 289478, 10, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 275, 421) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 891) [M::mem_pestat] mean and std.dev: (290.78, 159.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1126) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 245, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (270.05, 136.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (93, 503, 519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1371) [M::mem_pestat] mean and std.dev: (290.78, 214.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1797) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 272, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 819) [M::mem_pestat] mean and std.dev: (294.00, 120.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1023) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 48, #reads = 1089425 mem = 536878072 peak = 1034117120 [M::process] read 698088 sequences (100000217 bp) in 2.912 CPU sec, 3.028 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 289260, 19, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 320, 1120) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2994) [M::mem_pestat] mean and std.dev: (554.77, 552.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3931) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 245, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 753) [M::mem_pestat] mean and std.dev: (271.10, 136.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 950) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (441, 963, 1621) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3981) [M::mem_pestat] mean and std.dev: (1034.50, 868.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5161) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 275, 639) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1495) [M::mem_pestat] mean and std.dev: (336.08, 228.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1923) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698804 reads in 144.389 CPU sec, 4.575 real sec [M::mem_process_seqs] Processed 698502 reads in 96.344 CPU sec, 3.028 real sec [M::process] read 699654 sequences (100000189 bp) in 2.300 CPU sec, 2.356 real sec... sorting block 49, #reads = 1088985 mem = 536877356 peak = 1034117120 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 289318, 26, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 365, 644) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1524) [M::mem_pestat] mean and std.dev: (378.10, 281.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1964) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 248, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (272.64, 137.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 951) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (427, 999, 2987) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8107) [M::mem_pestat] mean and std.dev: (2187.58, 2594.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12566) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 286, 1260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3386) [M::mem_pestat] mean and std.dev: (607.26, 694.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4449) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698712 sequences (100000244 bp) in 2.473 CPU sec, 2.574 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 289923, 24, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 308, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 946) [M::mem_pestat] mean and std.dev: (351.84, 199.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1188) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 241, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 733) [M::mem_pestat] mean and std.dev: (266.49, 134.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 924) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (333, 887, 2653) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7293) [M::mem_pestat] mean and std.dev: (1394.04, 1297.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9613) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (278, 360, 534) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1046) [M::mem_pestat] mean and std.dev: (345.05, 143.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1302) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698088 reads in 147.262 CPU sec, 4.676 real sec [M::mem_process_seqs] Processed 699654 reads in 97.284 CPU sec, 3.061 real sec [M::process] read 697934 sequences (100000006 bp) in 2.089 CPU sec, 2.124 real sec... sorting block 50, #reads = 1087651 mem = 536876429 peak = 1034117120 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 288944, 31, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 221, 466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1108) [M::mem_pestat] mean and std.dev: (308.31, 220.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1429) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 243, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 741) [M::mem_pestat] mean and std.dev: (268.74, 135.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (721, 948, 3194) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8140) [M::mem_pestat] mean and std.dev: (1788.50, 1695.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10613) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (250, 619, 1376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3628) [M::mem_pestat] mean and std.dev: (779.89, 680.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4754) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697186 sequences (100000234 bp) in 2.548 CPU sec, 2.641 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 289033, 6, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 300, 950) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2544) [M::mem_pestat] mean and std.dev: (496.19, 464.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3341) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 247, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (272.34, 136.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 951) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 296, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1078) [M::mem_pestat] mean and std.dev: (315.21, 176.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1377) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698712 reads in 146.285 CPU sec, 4.645 real sec [M::mem_process_seqs] Processed 697934 reads in 97.690 CPU sec, 3.071 real sec sorting block 51, #reads = 1088934 mem = 536878744 peak = 1034117120 [M::process] read 696670 sequences (100000088 bp) in 2.064 CPU sec, 2.108 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 288221, 23, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (224, 328, 750) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1802) [M::mem_pestat] mean and std.dev: (360.84, 229.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2328) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 248, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (272.24, 135.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 944) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (349, 979, 1721) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4465) [M::mem_pestat] mean and std.dev: (1342.05, 1426.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7046) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 357, 878) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2194) [M::mem_pestat] mean and std.dev: (527.24, 475.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2852) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 52, #reads = 1087409 mem = 536878519 peak = 1034117120 [M::process] read 696524 sequences (100000146 bp) in 2.535 CPU sec, 2.639 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (29, 288092, 26, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (249, 309, 1103) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2811) [M::mem_pestat] mean and std.dev: (638.61, 637.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3665) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 249, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 750) [M::mem_pestat] mean and std.dev: (273.03, 135.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 945) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (529, 667, 1367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3043) [M::mem_pestat] mean and std.dev: (1078.68, 801.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4284) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 287, 488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1108) [M::mem_pestat] mean and std.dev: (367.12, 261.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1418) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697186 reads in 147.279 CPU sec, 4.666 real sec [M::process] read 696758 sequences (100000270 bp) in 1.913 CPU sec, 1.946 real sec... [M::mem_process_seqs] Processed 696670 reads in 98.220 CPU sec, 3.087 real sec sorting block 53, #reads = 1086609 mem = 536879381 peak = 1034117120 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 288176, 22, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 264, 426) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 908) [M::mem_pestat] mean and std.dev: (313.10, 190.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1149) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 250, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (273.92, 136.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 950) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (176, 741, 4748) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 13892) [M::mem_pestat] mean and std.dev: (2084.45, 2546.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 18464) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 299, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1028) [M::mem_pestat] mean and std.dev: (329.89, 235.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1306) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696434 sequences (100000171 bp) in 2.394 CPU sec, 2.502 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 288155, 24, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 306, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 976) [M::mem_pestat] mean and std.dev: (325.00, 197.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1232) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (272.25, 134.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (318, 433, 1074) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2586) [M::mem_pestat] mean and std.dev: (648.23, 675.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3349) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 326, 517) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1137) [M::mem_pestat] mean and std.dev: (348.44, 204.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1447) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696524 reads in 143.451 CPU sec, 4.564 real sec [M::mem_process_seqs] Processed 696758 reads in 96.254 CPU sec, 3.030 real sec [M::process] read 696928 sequences (100000140 bp) in 2.144 CPU sec, 2.199 real sec... sorting block 54, #reads = 1086101 mem = 536883710 peak = 1034117120 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 288528, 20, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 384, 624) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1446) [M::mem_pestat] mean and std.dev: (360.47, 206.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1857) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (272.06, 134.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 937) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (304, 947, 1155) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2857) [M::mem_pestat] mean and std.dev: (757.00, 606.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3708) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 312, 506) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1126) [M::mem_pestat] mean and std.dev: (358.66, 219.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1436) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697064 sequences (100000075 bp) in 2.403 CPU sec, 2.498 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 288372, 16, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 243, 563) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1361) [M::mem_pestat] mean and std.dev: (350.55, 285.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1760) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 247, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (271.73, 134.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 937) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (106, 883, 1858) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5362) [M::mem_pestat] mean and std.dev: (809.57, 716.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7114) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 253, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 883) [M::mem_pestat] mean and std.dev: (297.31, 170.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1115) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696434 reads in 140.260 CPU sec, 4.461 real sec sorting block 55, #reads = 1086378 mem = 536884212 peak = 1034117120 [M::process] read 697868 sequences (100000209 bp) in 2.221 CPU sec, 2.299 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (77, 288583, 17, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 252, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 641) [M::mem_pestat] mean and std.dev: (233.99, 99.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 800) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 246, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (269.75, 133.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 928) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (858, 1166, 4284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 11136) [M::mem_pestat] mean and std.dev: (2420.71, 2559.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 14562) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 263, 394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 796) [M::mem_pestat] mean and std.dev: (243.05, 97.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 997) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697064 reads in 82.553 CPU sec, 2.599 real sec [M::process] read 697038 sequences (100000179 bp) in 2.123 CPU sec, 2.141 real sec... [M::mem_process_seqs] Processed 696928 reads in 207.355 CPU sec, 6.543 real sec sorting block 56, #reads = 1086250 mem = 536878738 peak = 1034117120 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 288328, 14, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 280, 438) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 964) [M::mem_pestat] mean and std.dev: (246.89, 125.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1227) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 245, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (269.20, 134.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (284, 1291, 1546) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4070) [M::mem_pestat] mean and std.dev: (887.14, 630.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5332) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 292, 383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (291.95, 135.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 914) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696792 sequences (100000148 bp) in 2.700 CPU sec, 2.834 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 288847, 19, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 356, 599) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1375) [M::mem_pestat] mean and std.dev: (387.49, 270.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1763) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 246, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (270.11, 134.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 932) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (418, 441, 1600) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3964) [M::mem_pestat] mean and std.dev: (783.39, 564.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5146) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (158, 324, 525) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1259) [M::mem_pestat] mean and std.dev: (332.18, 202.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1626) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697868 reads in 165.722 CPU sec, 5.243 real sec [M::mem_process_seqs] Processed 697038 reads in 100.329 CPU sec, 3.161 real sec sorting block 57, #reads = 1084731 mem = 536882837 peak = 1034117120 [M::process] read 696206 sequences (100000226 bp) in 2.111 CPU sec, 2.200 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 288259, 6, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 245, 947) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2529) [M::mem_pestat] mean and std.dev: (502.17, 513.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3320) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 741) [M::mem_pestat] mean and std.dev: (271.47, 134.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 933) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 372, 548) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1316) [M::mem_pestat] mean and std.dev: (363.17, 268.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1700) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 696422 sequences (100000004 bp) in 2.140 CPU sec, 2.243 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 288418, 15, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (262, 321, 857) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2047) [M::mem_pestat] mean and std.dev: (434.71, 361.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2642) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 249, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (272.21, 133.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (379, 660, 1959) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5119) [M::mem_pestat] mean and std.dev: (1282.47, 1295.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6699) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 269, 493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1129) [M::mem_pestat] mean and std.dev: (303.50, 185.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1447) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696388 sequences (100000041 bp) in 1.419 CPU sec, 1.417 real sec... [M::mem_process_seqs] Processed 696792 reads in 146.622 CPU sec, 4.659 real sec sorting block 58, #reads = 1086071 mem = 536879448 peak = 1034117120 [M::mem_process_seqs] Processed 696206 reads in 96.055 CPU sec, 3.039 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 288393, 24, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 245, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1137) [M::mem_pestat] mean and std.dev: (395.31, 337.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1746) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 249, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (272.51, 134.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 938) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (355, 569, 1471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3703) [M::mem_pestat] mean and std.dev: (747.30, 586.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4819) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 348, 887) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2181) [M::mem_pestat] mean and std.dev: (519.27, 414.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2828) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 59, #reads = 1085949 mem = 536878672 peak = 1090838528 [M::process] read 696324 sequences (100000018 bp) in 2.746 CPU sec, 2.876 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 288514, 22, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 320, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 883) [M::mem_pestat] mean and std.dev: (280.85, 124.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1118) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 251, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (274.35, 136.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 950) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (414, 621, 814) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1614) [M::mem_pestat] mean and std.dev: (481.47, 269.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2014) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 280, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 833) [M::mem_pestat] mean and std.dev: (276.44, 143.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1036) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696422 reads in 147.615 CPU sec, 4.677 real sec [M::process] read 696472 sequences (100000056 bp) in 1.958 CPU sec, 1.979 real sec... [M::mem_process_seqs] Processed 696388 reads in 97.972 CPU sec, 3.081 real sec sorting block 60, #reads = 1083127 mem = 536878861 peak = 1090838528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 288172, 18, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 335, 903) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2323) [M::mem_pestat] mean and std.dev: (469.57, 498.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3033) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 250, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 751) [M::mem_pestat] mean and std.dev: (273.80, 135.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 946) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (565, 1057, 4329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 11857) [M::mem_pestat] mean and std.dev: (1792.67, 1685.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 15621) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (156, 262, 654) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1650) [M::mem_pestat] mean and std.dev: (309.96, 224.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2148) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703420 sequences (100000092 bp) in 2.095 CPU sec, 2.181 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 288174, 16, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 279, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1248) [M::mem_pestat] mean and std.dev: (340.03, 261.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1607) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 250, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 760) [M::mem_pestat] mean and std.dev: (275.25, 137.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 958) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (136, 279, 1013) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2767) [M::mem_pestat] mean and std.dev: (535.87, 483.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3644) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (216, 366, 633) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1467) [M::mem_pestat] mean and std.dev: (364.16, 236.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1884) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704338 sequences (100000029 bp) in 1.377 CPU sec, 1.386 real sec... [M::mem_process_seqs] Processed 696324 reads in 145.837 CPU sec, 4.650 real sec [M::mem_process_seqs] Processed 696472 reads in 100.604 CPU sec, 3.196 real sec sorting block 61, #reads = 1083603 mem = 536879919 peak = 1090838528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 290440, 16, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 204, 635) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1617) [M::mem_pestat] mean and std.dev: (307.12, 272.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2108) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 230, 336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 700) [M::mem_pestat] mean and std.dev: (255.27, 128.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 882) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (121, 559, 1957) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5629) [M::mem_pestat] mean and std.dev: (708.20, 743.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7465) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 256, 458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1026) [M::mem_pestat] mean and std.dev: (316.06, 219.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1310) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703220 sequences (100000158 bp) in 2.487 CPU sec, 2.612 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 290859, 12, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 246, 894) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2378) [M::mem_pestat] mean and std.dev: (439.38, 495.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3120) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 225, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 675) [M::mem_pestat] mean and std.dev: (249.62, 124.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 849) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (98, 159, 4771) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 14117) [M::mem_pestat] mean and std.dev: (1414.50, 2114.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 18790) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 259, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 896) [M::mem_pestat] mean and std.dev: (304.02, 164.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1119) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703420 reads in 147.772 CPU sec, 4.677 real sec [M::process] read 700814 sequences (100000123 bp) in 1.796 CPU sec, 1.797 real sec... sorting block 62, #reads = 1080728 mem = 536878446 peak = 1090838528 [M::mem_process_seqs] Processed 704338 reads in 95.276 CPU sec, 2.998 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 290640, 18, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 295, 576) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1428) [M::mem_pestat] mean and std.dev: (270.80, 161.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1854) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 229, 335) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 697) [M::mem_pestat] mean and std.dev: (255.01, 128.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 878) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (219, 1141, 1996) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5550) [M::mem_pestat] mean and std.dev: (1063.35, 972.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7327) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (157, 240, 557) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1357) [M::mem_pestat] mean and std.dev: (286.27, 186.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1757) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 63, #reads = 1092104 mem = 536876446 peak = 1090838528 [M::process] read 700378 sequences (100000154 bp) in 2.314 CPU sec, 2.416 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 290352, 22, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 283, 572) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1346) [M::mem_pestat] mean and std.dev: (295.38, 172.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1733) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 237, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 719) [M::mem_pestat] mean and std.dev: (262.14, 131.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 906) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (563, 1578, 1931) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4667) [M::mem_pestat] mean and std.dev: (1261.56, 808.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6035) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 374, 649) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1525) [M::mem_pestat] mean and std.dev: (373.54, 211.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1963) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700176 sequences (100000287 bp) in 1.530 CPU sec, 1.532 real sec... [M::mem_process_seqs] Processed 703220 reads in 143.450 CPU sec, 4.552 real sec [M::mem_process_seqs] Processed 700814 reads in 94.606 CPU sec, 2.984 real sec sorting block 64, #reads = 1090575 mem = 536883055 peak = 1090838528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 289673, 16, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 278, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 797) [M::mem_pestat] mean and std.dev: (251.65, 140.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1016) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 239, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 726) [M::mem_pestat] mean and std.dev: (263.96, 132.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 915) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (478, 1324, 5862) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 16630) [M::mem_pestat] mean and std.dev: (2703.31, 3080.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 22014) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 275, 915) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2367) [M::mem_pestat] mean and std.dev: (444.04, 434.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3093) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700090 sequences (100000133 bp) in 2.385 CPU sec, 2.480 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 289814, 24, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 352, 408) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 804) [M::mem_pestat] mean and std.dev: (301.29, 131.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1002) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 240, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (265.70, 134.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (110, 562, 1026) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2858) [M::mem_pestat] mean and std.dev: (610.18, 630.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3774) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (120, 162, 269) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 567) [M::mem_pestat] mean and std.dev: (186.50, 92.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 716) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699622 sequences (100000028 bp) in 1.470 CPU sec, 1.468 real sec... [M::mem_process_seqs] Processed 700378 reads in 149.536 CPU sec, 4.788 real sec [M::mem_process_seqs] Processed 700176 reads in 96.581 CPU sec, 3.052 real sec sorting block 65, #reads = 1089186 mem = 536877719 peak = 1090838528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 289137, 14, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 244, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1030) [M::mem_pestat] mean and std.dev: (315.80, 214.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1319) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 241, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 733) [M::mem_pestat] mean and std.dev: (265.96, 133.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 924) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (272, 518, 987) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2417) [M::mem_pestat] mean and std.dev: (655.62, 485.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3132) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (177, 262, 870) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2256) [M::mem_pestat] mean and std.dev: (462.04, 476.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2949) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698956 sequences (100000161 bp) in 2.364 CPU sec, 2.455 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 289508, 16, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 320, 628) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1618) [M::mem_pestat] mean and std.dev: (377.26, 283.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2113) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 242, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (267.46, 135.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 936) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (411, 1163, 3469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9585) [M::mem_pestat] mean and std.dev: (1579.81, 1409.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12643) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 357, 674) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1594) [M::mem_pestat] mean and std.dev: (400.41, 241.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2054) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698878 sequences (100000284 bp) in 1.460 CPU sec, 1.465 real sec... [M::mem_process_seqs] Processed 700090 reads in 142.780 CPU sec, 4.526 real sec [M::mem_process_seqs] Processed 699622 reads in 94.108 CPU sec, 2.976 real sec sorting block 66, #reads = 1089063 mem = 536879654 peak = 1090838528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 289029, 21, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (229, 355, 753) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1801) [M::mem_pestat] mean and std.dev: (446.85, 339.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2325) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 244, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (268.95, 135.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (87, 323, 1881) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5469) [M::mem_pestat] mean and std.dev: (814.89, 1202.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7263) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (262, 380, 822) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1942) [M::mem_pestat] mean and std.dev: (478.34, 362.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2502) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698814 sequences (100000144 bp) in 2.480 CPU sec, 2.566 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 288930, 18, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 255, 555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1329) [M::mem_pestat] mean and std.dev: (341.29, 245.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1716) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 244, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (270.15, 136.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 942) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (81, 359, 550) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1488) [M::mem_pestat] mean and std.dev: (301.24, 251.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1957) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 306, 1095) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2891) [M::mem_pestat] mean and std.dev: (571.07, 508.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3789) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698956 reads in 143.609 CPU sec, 4.561 real sec sorting block 67, #reads = 1088521 mem = 536876762 peak = 1090838528 [M::mem_process_seqs] Processed 698878 reads in 96.884 CPU sec, 3.044 real sec [M::process] read 698336 sequences (100000238 bp) in 1.957 CPU sec, 1.985 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 288923, 27, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 239, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 866) [M::mem_pestat] mean and std.dev: (213.56, 97.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1107) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 245, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 750) [M::mem_pestat] mean and std.dev: (270.57, 136.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 946) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (289, 880, 1360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3502) [M::mem_pestat] mean and std.dev: (961.04, 872.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4573) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 271, 387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 795) [M::mem_pestat] mean and std.dev: (274.02, 141.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 999) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 68, #reads = 1088048 mem = 536878757 peak = 1090838528 [M::process] read 698146 sequences (100000189 bp) in 2.432 CPU sec, 2.533 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 289333, 17, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 336, 624) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1482) [M::mem_pestat] mean and std.dev: (345.30, 236.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1911) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 246, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (272.08, 137.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 951) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (323, 752, 1169) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2861) [M::mem_pestat] mean and std.dev: (593.38, 388.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3707) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 279, 489) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1127) [M::mem_pestat] mean and std.dev: (276.70, 158.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1446) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698814 reads in 149.936 CPU sec, 4.765 real sec [M::mem_process_seqs] Processed 698336 reads in 102.178 CPU sec, 3.213 real sec [M::process] read 698078 sequences (100000128 bp) in 2.015 CPU sec, 2.038 real sec... sorting block 69, #reads = 1088026 mem = 536879243 peak = 1090838528 [M::process] read 698710 sequences (100000017 bp) in 2.461 CPU sec, 2.567 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 288954, 18, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 248, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1240) [M::mem_pestat] mean and std.dev: (303.19, 219.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1602) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 247, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 755) [M::mem_pestat] mean and std.dev: (272.60, 136.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 952) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (73, 321, 2953) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8713) [M::mem_pestat] mean and std.dev: (1528.39, 1953.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11593) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 308, 639) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1511) [M::mem_pestat] mean and std.dev: (465.33, 435.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2209) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698078 reads in 85.095 CPU sec, 2.676 real sec [M::process] read 698844 sequences (100000055 bp) in 1.955 CPU sec, 1.980 real sec... sorting block 70, #reads = 1088444 mem = 536882336 peak = 1090838528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 289118, 24, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 377, 643) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1557) [M::mem_pestat] mean and std.dev: (331.02, 207.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2014) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 246, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (272.23, 137.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 951) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (177, 232, 1026) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2724) [M::mem_pestat] mean and std.dev: (446.90, 425.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3573) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (193, 289, 621) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1477) [M::mem_pestat] mean and std.dev: (353.62, 288.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1905) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 289263, 28, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 280, 633) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1599) [M::mem_pestat] mean and std.dev: (304.42, 185.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2082) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 244, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (269.62, 135.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 938) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (356, 594, 2634) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7190) [M::mem_pestat] mean and std.dev: (1342.41, 1750.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9468) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 297, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1098) [M::mem_pestat] mean and std.dev: (284.59, 147.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1407) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698146 reads in 238.676 CPU sec, 7.573 real sec [M::mem_process_seqs] Processed 698710 reads in 124.070 CPU sec, 3.923 real sec [M::process] read 697128 sequences (100000055 bp) in 2.286 CPU sec, 2.342 real sec... sorting block 71, #reads = 1088223 mem = 536884731 peak = 1090838528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 289045, 26, 37) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 233, 774) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1982) [M::mem_pestat] mean and std.dev: (389.87, 398.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2586) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 242, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (267.92, 134.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (327, 691, 1488) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3810) [M::mem_pestat] mean and std.dev: (949.69, 752.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4971) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (173, 221, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 962) [M::mem_pestat] mean and std.dev: (279.79, 150.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1225) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696898 sequences (100000169 bp) in 2.672 CPU sec, 2.784 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 288736, 24, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 320, 872) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2236) [M::mem_pestat] mean and std.dev: (476.47, 402.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2918) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 250, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 759) [M::mem_pestat] mean and std.dev: (274.66, 138.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 957) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (341, 762, 1744) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4550) [M::mem_pestat] mean and std.dev: (1129.35, 1080.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5953) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 304, 507) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1123) [M::mem_pestat] mean and std.dev: (326.44, 201.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1431) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698844 reads in 158.120 CPU sec, 5.010 real sec [M::process] read 696280 sequences (100000253 bp) in 1.931 CPU sec, 1.942 real sec... [M::mem_process_seqs] Processed 697128 reads in 106.421 CPU sec, 3.342 real sec sorting block 72, #reads = 1087330 mem = 536878731 peak = 1090838528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 288228, 16, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 236, 1009) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2619) [M::mem_pestat] mean and std.dev: (473.13, 476.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3424) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 251, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 757) [M::mem_pestat] mean and std.dev: (274.67, 137.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 954) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (260, 761, 1976) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5408) [M::mem_pestat] mean and std.dev: (1276.53, 1489.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7233) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (160, 231, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 601) [M::mem_pestat] mean and std.dev: (234.37, 98.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 748) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695936 sequences (100000096 bp) in 2.359 CPU sec, 2.504 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 288296, 26, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 205, 484) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1134) [M::mem_pestat] mean and std.dev: (296.07, 245.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1459) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 251, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (273.57, 134.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 939) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (122, 636, 1341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3779) [M::mem_pestat] mean and std.dev: (913.69, 833.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4998) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 313, 491) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1005) [M::mem_pestat] mean and std.dev: (379.56, 190.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1262) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695882 sequences (100000011 bp) in 1.580 CPU sec, 1.573 real sec... [M::mem_process_seqs] Processed 696898 reads in 160.993 CPU sec, 5.120 real sec sorting block 73, #reads = 1086896 mem = 536880322 peak = 1090838528 [M::mem_process_seqs] Processed 696280 reads in 108.523 CPU sec, 3.435 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 288123, 24, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 290, 720) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1768) [M::mem_pestat] mean and std.dev: (392.45, 317.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2292) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 251, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (273.77, 134.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 943) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (332, 640, 1776) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4664) [M::mem_pestat] mean and std.dev: (1005.33, 1020.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6108) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 308, 555) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1239) [M::mem_pestat] mean and std.dev: (392.42, 250.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1581) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 74, #reads = 1086984 mem = 536878917 peak = 1090838528 [M::process] read 695946 sequences (100000046 bp) in 2.635 CPU sec, 2.725 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 287799, 18, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 430, 865) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2221) [M::mem_pestat] mean and std.dev: (516.62, 436.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2899) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 250, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 743) [M::mem_pestat] mean and std.dev: (273.03, 133.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 935) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (163, 322, 589) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1441) [M::mem_pestat] mean and std.dev: (326.93, 259.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1867) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (179, 279, 473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1061) [M::mem_pestat] mean and std.dev: (282.17, 162.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1355) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696288 sequences (100000238 bp) in 1.780 CPU sec, 1.781 real sec... [M::mem_process_seqs] Processed 695936 reads in 162.148 CPU sec, 5.144 real sec [M::mem_process_seqs] Processed 695882 reads in 109.161 CPU sec, 3.444 real sec sorting block 75, #reads = 1085214 mem = 536881237 peak = 1090838528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 287817, 16, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 306, 1031) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2707) [M::mem_pestat] mean and std.dev: (565.37, 471.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3545) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 248, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (270.93, 132.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 926) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (506, 1065, 2364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6080) [M::mem_pestat] mean and std.dev: (1163.00, 809.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7938) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 316, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 957) [M::mem_pestat] mean and std.dev: (304.23, 145.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1209) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696532 sequences (100000265 bp) in 2.541 CPU sec, 2.652 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 288144, 15, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 230, 443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 979) [M::mem_pestat] mean and std.dev: (268.55, 171.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1247) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 248, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (270.65, 132.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 926) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (392, 1040, 1545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3851) [M::mem_pestat] mean and std.dev: (1099.57, 971.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5004) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 323, 849) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2119) [M::mem_pestat] mean and std.dev: (470.63, 386.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2754) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696552 sequences (100000249 bp) in 1.688 CPU sec, 1.687 real sec... [M::mem_process_seqs] Processed 695946 reads in 158.934 CPU sec, 5.037 real sec [M::mem_process_seqs] Processed 696288 reads in 105.362 CPU sec, 3.324 real sec sorting block 76, #reads = 1084915 mem = 536886122 peak = 1090838528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 288285, 12, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (135, 240, 373) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 849) [M::mem_pestat] mean and std.dev: (250.33, 154.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1087) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 249, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 739) [M::mem_pestat] mean and std.dev: (271.62, 133.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 930) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (87, 2184, 5682) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 16872) [M::mem_pestat] mean and std.dev: (2210.58, 2201.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 22467) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 275, 642) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1556) [M::mem_pestat] mean and std.dev: (389.68, 300.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2013) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696138 sequences (100000157 bp) in 2.387 CPU sec, 2.494 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 288039, 26, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 367, 668) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1642) [M::mem_pestat] mean and std.dev: (376.86, 281.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2129) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::process] read 696564 sequences (100000073 bp) in 1.552 CPU sec, 1.562 real sec... [M::mem_pestat] (25, 50, 75) percentile: (166, 248, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 733) [M::mem_pestat] mean and std.dev: (270.78, 133.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 922) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (224, 1148, 2185) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6107) [M::mem_pestat] mean and std.dev: (1351.23, 1182.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8068) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 348, 448) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 956) [M::mem_pestat] mean and std.dev: (327.43, 159.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1210) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696532 reads in 158.022 CPU sec, 5.015 real sec [M::mem_process_seqs] Processed 696552 reads in 106.138 CPU sec, 3.363 real sec sorting block 77, #reads = 1084282 mem = 536879589 peak = 1090838528 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 287823, 30, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (168, 285, 371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 777) [M::mem_pestat] mean and std.dev: (257.94, 119.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 980) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 249, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (272.20, 133.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (532, 894, 2466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6334) [M::mem_pestat] mean and std.dev: (1366.87, 1074.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8268) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 194, 386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 820) [M::mem_pestat] mean and std.dev: (248.38, 141.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1037) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696384 sequences (100000191 bp) in 2.395 CPU sec, 2.502 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (41, 288164, 28, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 268, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 756) [M::mem_pestat] mean and std.dev: (254.68, 109.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 950) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 248, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 741) [M::mem_pestat] mean and std.dev: (271.76, 134.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 933) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (425, 1164, 1420) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3410) [M::mem_pestat] mean and std.dev: (955.22, 669.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4405) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 345, 548) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1248) [M::mem_pestat] mean and std.dev: (382.56, 302.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1598) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696188 sequences (100000050 bp) in 1.799 CPU sec, 1.799 real sec... [M::mem_process_seqs] Processed 696138 reads in 163.753 CPU sec, 5.209 real sec sorting block 78, #reads = 1084758 mem = 536879448 peak = 1090838528 [M::mem_process_seqs] Processed 696564 reads in 110.695 CPU sec, 3.502 real sec sorting block 79, #reads = 1084602 mem = 536878304 peak = 1121177600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 288265, 17, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 263, 478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1076) [M::mem_pestat] mean and std.dev: (320.42, 183.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1375) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 249, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (272.26, 134.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (276, 306, 877) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2079) [M::mem_pestat] mean and std.dev: (390.79, 239.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2680) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 246, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 976) [M::mem_pestat] mean and std.dev: (311.27, 182.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1244) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 695928 sequences (100000170 bp) in 2.425 CPU sec, 2.535 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 288045, 14, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 239, 589) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1445) [M::mem_pestat] mean and std.dev: (347.71, 305.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1873) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (166, 250, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 751) [M::mem_pestat] mean and std.dev: (273.74, 135.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 946) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (226, 1028, 1912) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5284) [M::mem_pestat] mean and std.dev: (917.42, 711.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6970) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 317, 899) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2253) [M::mem_pestat] mean and std.dev: (405.35, 291.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2930) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696142 sequences (100000176 bp) in 1.840 CPU sec, 1.836 real sec... [M::mem_process_seqs] Processed 696384 reads in 162.035 CPU sec, 5.152 real sec [M::mem_process_seqs] Processed 696188 reads in 111.394 CPU sec, 3.537 real sec sorting block 80, #reads = 1085786 mem = 536884885 peak = 1121177600 [M::process] read 695918 sequences (100000222 bp) in 2.714 CPU sec, 2.827 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 288464, 15, 85) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (223, 296, 1724) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4726) [M::mem_pestat] mean and std.dev: (407.36, 461.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6227) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 252, 364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 758) [M::mem_pestat] mean and std.dev: (275.50, 137.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 955) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (114, 542, 1519) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4329) [M::mem_pestat] mean and std.dev: (754.07, 681.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5734) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 280, 545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1263) [M::mem_pestat] mean and std.dev: (348.33, 233.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1622) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699726 sequences (100000040 bp) in 1.600 CPU sec, 1.594 real sec... [M::mem_process_seqs] Processed 696142 reads in 94.922 CPU sec, 2.995 real sec sorting block 81, #reads = 1085147 mem = 536876943 peak = 1121177600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 288093, 22, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 333, 851) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2089) [M::mem_pestat] mean and std.dev: (464.41, 395.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2708) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 251, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 752) [M::mem_pestat] mean and std.dev: (274.52, 135.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 947) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (306, 912, 1473) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3807) [M::mem_pestat] mean and std.dev: (1097.09, 901.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4974) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (217, 351, 469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 973) [M::mem_pestat] mean and std.dev: (335.31, 170.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1225) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 288073, 23, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 256, 504) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1164) [M::mem_pestat] mean and std.dev: (274.47, 167.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1494) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (167, 251, 362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 752) [M::mem_pestat] mean and std.dev: (274.68, 135.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 947) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (352, 470, 1098) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2590) [M::mem_pestat] mean and std.dev: (626.81, 452.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3336) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 320, 772) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1960) [M::mem_pestat] mean and std.dev: (489.36, 425.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2554) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 695928 reads in 249.965 CPU sec, 7.932 real sec [M::process] read 708096 sequences (100000150 bp) in 2.425 CPU sec, 2.447 real sec... [M::mem_process_seqs] Processed 695918 reads in 127.901 CPU sec, 4.044 real sec sorting block 82, #reads = 1085339 mem = 536881625 peak = 1121177600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 288813, 22, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (115, 249, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 982) [M::mem_pestat] mean and std.dev: (236.51, 135.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1271) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 724) [M::mem_pestat] mean and std.dev: (264.54, 132.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 912) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (715, 1174, 4128) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10954) [M::mem_pestat] mean and std.dev: (2094.68, 1979.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 14367) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 240, 467) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1045) [M::mem_pestat] mean and std.dev: (274.82, 208.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1334) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706026 sequences (100000249 bp) in 2.576 CPU sec, 2.690 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 292133, 15, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 256, 583) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1441) [M::mem_pestat] mean and std.dev: (333.47, 286.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1870) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 215, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 640) [M::mem_pestat] mean and std.dev: (239.71, 119.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 804) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (186, 982, 2407) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6849) [M::mem_pestat] mean and std.dev: (1211.47, 1071.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9070) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 260, 574) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1414) [M::mem_pestat] mean and std.dev: (280.12, 217.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1834) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705168 sequences (100000087 bp) in 1.900 CPU sec, 1.898 real sec... [M::mem_process_seqs] Processed 699726 reads in 177.860 CPU sec, 5.646 real sec [M::mem_process_seqs] Processed 708096 reads in 120.193 CPU sec, 3.802 real sec sorting block 83, #reads = 1084187 mem = 536880540 peak = 1121177600 [M::process] read 705948 sequences (100000135 bp) in 2.820 CPU sec, 2.920 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 291148, 13, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (175, 264, 429) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 937) [M::mem_pestat] mean and std.dev: (273.49, 159.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1191) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 683) [M::mem_pestat] mean and std.dev: (251.07, 127.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 860) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (580, 1076, 2384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5992) [M::mem_pestat] mean and std.dev: (1273.08, 1168.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7796) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 335, 792) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1936) [M::mem_pestat] mean and std.dev: (419.33, 353.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2508) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704954 sequences (100000122 bp) in 1.910 CPU sec, 1.907 real sec... [M::mem_process_seqs] Processed 705168 reads in 93.856 CPU sec, 2.956 real sec sorting block 84, #reads = 1087955 mem = 536880031 peak = 1121177600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 291293, 23, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 243, 445) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 983) [M::mem_pestat] mean and std.dev: (295.79, 205.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1252) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 221, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 664) [M::mem_pestat] mean and std.dev: (247.29, 124.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 835) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (718, 913, 1773) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3883) [M::mem_pestat] mean and std.dev: (976.82, 819.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4938) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 245, 771) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1893) [M::mem_pestat] mean and std.dev: (435.50, 440.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2454) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 292079, 10, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 262, 904) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2396) [M::mem_pestat] mean and std.dev: (532.83, 549.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3142) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 222, 328) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 684) [M::mem_pestat] mean and std.dev: (249.78, 127.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 862) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (151, 920, 1244) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3430) [M::mem_pestat] mean and std.dev: (811.90, 682.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4523) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 266, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1040) [M::mem_pestat] mean and std.dev: (304.28, 180.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1328) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703818 sequences (100000157 bp) in 2.018 CPU sec, 2.021 real sec... [M::mem_process_seqs] Processed 706026 reads in 264.354 CPU sec, 8.356 real sec [M::mem_process_seqs] Processed 705948 reads in 130.540 CPU sec, 4.154 real sec sorting block 85, #reads = 1089074 mem = 536880664 peak = 1121177600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 291929, 18, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 223, 685) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1767) [M::mem_pestat] mean and std.dev: (352.00, 357.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2308) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 225, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 692) [M::mem_pestat] mean and std.dev: (252.36, 128.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 872) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (298, 847, 1593) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4183) [M::mem_pestat] mean and std.dev: (1013.33, 830.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5478) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (230, 319, 993) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2519) [M::mem_pestat] mean and std.dev: (588.19, 535.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3282) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703082 sequences (100000219 bp) in 2.509 CPU sec, 2.639 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 291042, 12, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 408, 1484) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4094) [M::mem_pestat] mean and std.dev: (681.15, 749.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5399) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 228, 336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 702) [M::mem_pestat] mean and std.dev: (254.84, 129.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 885) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (150, 550, 1036) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2808) [M::mem_pestat] mean and std.dev: (599.75, 520.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3694) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 449, 1487) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4003) [M::mem_pestat] mean and std.dev: (779.46, 840.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5261) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702638 sequences (100000079 bp) in 1.476 CPU sec, 1.483 real sec... [M::mem_process_seqs] Processed 704954 reads in 161.480 CPU sec, 5.137 real sec sorting block 86, #reads = 1089738 mem = 536876407 peak = 1121177600 [M::mem_process_seqs] Processed 703818 reads in 106.989 CPU sec, 3.669 real sec sorting block 87, #reads = 1089128 mem = 536882783 peak = 1121177600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 291074, 25, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (147, 283, 393) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 885) [M::mem_pestat] mean and std.dev: (268.53, 139.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1131) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 231, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 713) [M::mem_pestat] mean and std.dev: (258.38, 131.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 899) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (241, 693, 2314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6460) [M::mem_pestat] mean and std.dev: (1464.46, 1709.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8533) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 338, 738) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1892) [M::mem_pestat] mean and std.dev: (410.14, 382.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2469) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702426 sequences (100000133 bp) in 2.274 CPU sec, 2.382 real sec... [M::process] read 702012 sequences (100000078 bp) in 1.760 CPU sec, 1.762 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 290947, 12, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 407, 603) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1425) [M::mem_pestat] mean and std.dev: (337.09, 230.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1836) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 232, 343) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 717) [M::mem_pestat] mean and std.dev: (259.58, 131.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 904) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (231, 878, 2262) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6324) [M::mem_pestat] mean and std.dev: (1143.42, 1311.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8355) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 323, 536) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1214) [M::mem_pestat] mean and std.dev: (347.71, 225.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1553) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703082 reads in 161.112 CPU sec, 5.372 real sec [M::mem_process_seqs] Processed 702638 reads in 102.269 CPU sec, 3.244 real sec sorting block 88, #reads = 1089823 mem = 536881452 peak = 1121177600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 290484, 18, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 262, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 961) [M::mem_pestat] mean and std.dev: (313.97, 181.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1215) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 232, 343) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 719) [M::mem_pestat] mean and std.dev: (259.70, 131.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 907) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (545, 864, 2808) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7334) [M::mem_pestat] mean and std.dev: (1719.22, 1823.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9597) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 206, 365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 767) [M::mem_pestat] mean and std.dev: (256.83, 156.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 968) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701704 sequences (100000255 bp) in 2.454 CPU sec, 2.543 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 290474, 17, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 243, 655) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1619) [M::mem_pestat] mean and std.dev: (405.31, 306.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2101) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 233, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 720) [M::mem_pestat] mean and std.dev: (260.47, 132.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 908) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (540, 1235, 2888) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7584) [M::mem_pestat] mean and std.dev: (1601.06, 1383.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9932) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 269, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 681) [M::mem_pestat] mean and std.dev: (254.32, 77.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 841) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701394 sequences (100000090 bp) in 1.840 CPU sec, 1.837 real sec... [M::mem_process_seqs] Processed 702426 reads in 157.712 CPU sec, 4.994 real sec [M::mem_process_seqs] Processed 702012 reads in 104.216 CPU sec, 3.288 real sec sorting block 89, #reads = 1088993 mem = 536880065 peak = 1121177600 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 290678, 16, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 286, 894) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2318) [M::mem_pestat] mean and std.dev: (524.25, 479.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3030) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 730) [M::mem_pestat] mean and std.dev: (262.88, 133.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 921) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (484, 921, 1556) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3700) [M::mem_pestat] mean and std.dev: (880.94, 658.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4772) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 317, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 895) [M::mem_pestat] mean and std.dev: (307.06, 149.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1133) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701636 sequences (100000087 bp) in 2.436 CPU sec, 2.530 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 290412, 14, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 287, 523) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1263) [M::mem_pestat] mean and std.dev: (312.18, 242.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1633) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (262.72, 133.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (441, 1609, 1889) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4785) [M::mem_pestat] mean and std.dev: (1028.17, 769.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6233) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (146, 238, 939) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2525) [M::mem_pestat] mean and std.dev: (450.92, 518.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3318) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701704 reads in 155.595 CPU sec, 4.926 real sec [M::process] read 701218 sequences (100000141 bp) in 1.860 CPU sec, 1.860 real sec... sorting block 90, #reads = 1088923 mem = 536879918 peak = 1121177600 [M::mem_process_seqs] Processed 701394 reads in 102.839 CPU sec, 3.245 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 290710, 24, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 209, 752) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1952) [M::mem_pestat] mean and std.dev: (426.00, 404.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2552) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (262.70, 133.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1174, 2244, 9938) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 27466) [M::mem_pestat] mean and std.dev: (3631.54, 3796.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 36230) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 400, 866) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2250) [M::mem_pestat] mean and std.dev: (487.86, 392.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2942) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701542 sequences (100000189 bp) in 2.663 CPU sec, 2.754 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 289929, 9, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (144, 237, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1152) [M::mem_pestat] mean and std.dev: (320.96, 249.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1488) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 236, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (263.03, 133.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 389, 565) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1315) [M::mem_pestat] mean and std.dev: (406.08, 238.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1690) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701636 reads in 154.687 CPU sec, 4.892 real sec sorting block 91, #reads = 1087882 mem = 536877588 peak = 1121177600 [M::process] read 701056 sequences (100000255 bp) in 2.050 CPU sec, 2.067 real sec... [M::mem_process_seqs] Processed 701218 reads in 104.637 CPU sec, 3.287 real sec sorting block 92, #reads = 1087115 mem = 536879171 peak = 1152679936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 290411, 18, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 343, 531) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1133) [M::mem_pestat] mean and std.dev: (327.86, 161.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1434) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (262.41, 133.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 917) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (162, 1227, 6869) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 20283) [M::mem_pestat] mean and std.dev: (2934.72, 2894.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 26990) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 397, 799) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1939) [M::mem_pestat] mean and std.dev: (448.02, 346.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2509) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701258 sequences (100000266 bp) in 2.697 CPU sec, 2.789 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 289957, 20, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (196, 236, 338) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 622) [M::mem_pestat] mean and std.dev: (215.55, 72.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 764) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 237, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 731) [M::mem_pestat] mean and std.dev: (263.91, 134.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 922) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (303, 775, 1432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3690) [M::mem_pestat] mean and std.dev: (854.65, 790.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4819) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 340, 634) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1578) [M::mem_pestat] mean and std.dev: (473.56, 440.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2234) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700960 sequences (100000170 bp) in 1.839 CPU sec, 1.843 real sec... [M::mem_process_seqs] Processed 701542 reads in 164.503 CPU sec, 5.205 real sec [M::mem_process_seqs] Processed 701056 reads in 109.234 CPU sec, 3.443 real sec sorting block 93, #reads = 1087636 mem = 536879386 peak = 1152679936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 290042, 11, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 374, 1152) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3042) [M::mem_pestat] mean and std.dev: (613.37, 596.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3987) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (263.61, 134.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 918) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (73, 160, 633) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1753) [M::mem_pestat] mean and std.dev: (264.00, 323.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2313) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 265, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1178) [M::mem_pestat] mean and std.dev: (296.84, 179.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1506) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700722 sequences (100000224 bp) in 2.368 CPU sec, 2.454 real sec... [M::process] read 700466 sequences (100000286 bp) in 1.500 CPU sec, 1.499 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (39, 290251, 13, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 345, 576) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1328) [M::mem_pestat] mean and std.dev: (381.87, 235.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1704) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 236, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 730) [M::mem_pestat] mean and std.dev: (263.76, 134.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 921) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (201, 441, 839) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2115) [M::mem_pestat] mean and std.dev: (493.77, 367.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2753) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 292, 382) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 704) [M::mem_pestat] mean and std.dev: (279.00, 106.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 865) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701258 reads in 160.018 CPU sec, 5.085 real sec [M::mem_process_seqs] Processed 700960 reads in 104.696 CPU sec, 3.325 real sec sorting block 94, #reads = 1086338 mem = 536880445 peak = 1152679936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 290402, 14, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 279, 778) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1912) [M::mem_pestat] mean and std.dev: (496.20, 467.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2479) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 237, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 734) [M::mem_pestat] mean and std.dev: (265.00, 135.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 926) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (928, 1462, 2929) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6931) [M::mem_pestat] mean and std.dev: (2039.86, 1529.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8932) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 386, 2627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7559) [M::mem_pestat] mean and std.dev: (1324.35, 1662.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10025) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699928 sequences (100000095 bp) in 2.229 CPU sec, 2.315 real sec... [M::process] read 699368 sequences (100000036 bp) in 1.450 CPU sec, 1.445 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 289646, 15, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 262, 612) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1516) [M::mem_pestat] mean and std.dev: (320.73, 241.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1968) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 238, 350) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 734) [M::mem_pestat] mean and std.dev: (264.88, 134.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 926) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (112, 138, 838) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2290) [M::mem_pestat] mean and std.dev: (567.40, 597.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3016) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 325, 665) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1585) [M::mem_pestat] mean and std.dev: (425.58, 327.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2045) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700722 reads in 155.970 CPU sec, 4.961 real sec sorting block 95, #reads = 1086203 mem = 536878311 peak = 1152679936 [M::mem_process_seqs] Processed 700466 reads in 104.164 CPU sec, 3.306 real sec sorting block 96, #reads = 1086855 mem = 536879483 peak = 1152679936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 289154, 21, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 311, 574) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1416) [M::mem_pestat] mean and std.dev: (351.63, 280.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1837) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 240, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (266.72, 135.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 928) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (411, 1490, 2570) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6888) [M::mem_pestat] mean and std.dev: (1971.86, 1657.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9047) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 219, 564) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1352) [M::mem_pestat] mean and std.dev: (335.30, 269.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1746) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699152 sequences (100000004 bp) in 2.533 CPU sec, 2.621 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 289410, 28, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 413, 1072) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2858) [M::mem_pestat] mean and std.dev: (576.70, 575.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3751) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 241, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (267.25, 134.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (455, 761, 1847) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4631) [M::mem_pestat] mean and std.dev: (1073.64, 993.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6023) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 257, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 632) [M::mem_pestat] mean and std.dev: (254.50, 107.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 775) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698356 sequences (100000179 bp) in 1.890 CPU sec, 1.891 real sec... [M::mem_process_seqs] Processed 699928 reads in 164.747 CPU sec, 5.219 real sec [M::mem_process_seqs] Processed 699368 reads in 110.542 CPU sec, 3.490 real sec sorting block 97, #reads = 1085494 mem = 536877476 peak = 1152679936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (74, 289411, 28, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 243, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 759) [M::mem_pestat] mean and std.dev: (241.02, 119.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 960) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 242, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 734) [M::mem_pestat] mean and std.dev: (266.85, 133.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 925) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (383, 743, 1472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3650) [M::mem_pestat] mean and std.dev: (930.73, 902.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4739) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 275, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 913) [M::mem_pestat] mean and std.dev: (286.24, 142.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1157) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698036 sequences (100000014 bp) in 2.704 CPU sec, 2.796 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 288600, 22, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 246, 642) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1564) [M::mem_pestat] mean and std.dev: (303.20, 208.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2025) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 244, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (268.36, 133.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (740, 1444, 2184) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5072) [M::mem_pestat] mean and std.dev: (1377.55, 736.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6516) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 279, 910) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2348) [M::mem_pestat] mean and std.dev: (492.71, 463.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3067) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697544 sequences (100000008 bp) in 2.103 CPU sec, 2.114 real sec... [M::mem_process_seqs] Processed 699152 reads in 172.521 CPU sec, 5.461 real sec [M::mem_process_seqs] Processed 698356 reads in 116.038 CPU sec, 3.655 real sec sorting block 98, #reads = 1084198 mem = 536877937 peak = 1152679936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 288566, 19, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 298, 413) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 849) [M::mem_pestat] mean and std.dev: (289.06, 133.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1067) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 245, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 739) [M::mem_pestat] mean and std.dev: (269.64, 134.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 931) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (156, 492, 2581) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7431) [M::mem_pestat] mean and std.dev: (1297.05, 1482.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9856) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 377, 925) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2325) [M::mem_pestat] mean and std.dev: (606.93, 536.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3025) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696960 sequences (100000025 bp) in 2.841 CPU sec, 2.969 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 288902, 24, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (134, 229, 435) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1037) [M::mem_pestat] mean and std.dev: (297.68, 213.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1338) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 246, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (270.32, 134.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 932) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (193, 546, 1857) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5185) [M::mem_pestat] mean and std.dev: (1034.21, 1157.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6849) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 234, 384) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 770) [M::mem_pestat] mean and std.dev: (253.00, 122.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 963) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698036 reads in 174.090 CPU sec, 5.514 real sec [M::process] read 697436 sequences (100000099 bp) in 2.108 CPU sec, 2.107 real sec... sorting block 99, #reads = 1083601 mem = 536879264 peak = 1152679936 [M::mem_process_seqs] Processed 697544 reads in 116.639 CPU sec, 3.675 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 288070, 23, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (222, 280, 503) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1065) [M::mem_pestat] mean and std.dev: (291.62, 165.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1346) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 249, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 753) [M::mem_pestat] mean and std.dev: (273.33, 135.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (241, 814, 2348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6562) [M::mem_pestat] mean and std.dev: (1434.86, 1754.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8669) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 295, 661) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1567) [M::mem_pestat] mean and std.dev: (275.57, 136.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2020) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 100, #reads = 1083294 mem = 536882263 peak = 1152679936 [M::process] read 697186 sequences (100000270 bp) in 2.919 CPU sec, 3.036 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 288524, 28, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (216, 324, 783) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1917) [M::mem_pestat] mean and std.dev: (393.87, 294.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2484) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 245, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (269.96, 134.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 932) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (375, 1355, 1844) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4782) [M::mem_pestat] mean and std.dev: (1308.68, 1060.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6251) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 440, 725) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1691) [M::mem_pestat] mean and std.dev: (490.87, 367.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2174) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697972 sequences (100000122 bp) in 2.055 CPU sec, 2.066 real sec... [M::mem_process_seqs] Processed 696960 reads in 176.185 CPU sec, 5.573 real sec [M::mem_process_seqs] Processed 697436 reads in 117.980 CPU sec, 3.727 real sec sorting block 101, #reads = 1082467 mem = 536879272 peak = 1152679936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 288533, 15, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 323, 1343) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3695) [M::mem_pestat] mean and std.dev: (613.30, 722.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4871) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 247, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (272.12, 135.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 940) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (185, 473, 1275) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3455) [M::mem_pestat] mean and std.dev: (529.08, 493.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4545) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 281, 679) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1659) [M::mem_pestat] mean and std.dev: (429.37, 433.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2164) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706266 sequences (100000111 bp) in 2.909 CPU sec, 3.002 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (78, 288597, 20, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 305, 650) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1652) [M::mem_pestat] mean and std.dev: (372.53, 285.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2153) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 245, 358) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 748) [M::mem_pestat] mean and std.dev: (270.79, 136.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 943) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (158, 1050, 2578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7418) [M::mem_pestat] mean and std.dev: (1304.25, 1371.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9838) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 349, 548) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1272) [M::mem_pestat] mean and std.dev: (356.60, 219.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1634) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697186 reads in 177.102 CPU sec, 5.607 real sec [M::process] read 712464 sequences (100000155 bp) in 2.120 CPU sec, 2.116 real sec... [M::mem_process_seqs] Processed 697972 reads in 118.787 CPU sec, 3.742 real sec sorting block 102, #reads = 1082424 mem = 536882342 peak = 1152679936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 291308, 27, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (149, 216, 407) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 923) [M::mem_pestat] mean and std.dev: (278.24, 194.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1181) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 221, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 666) [M::mem_pestat] mean and std.dev: (246.29, 123.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 838) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (244, 575, 1360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3592) [M::mem_pestat] mean and std.dev: (809.88, 904.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4708) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (163, 286, 638) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1588) [M::mem_pestat] mean and std.dev: (399.02, 357.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2063) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 711936 sequences (100000219 bp) in 3.135 CPU sec, 3.220 real sec... [M::process] read 710430 sequences (100000005 bp) in 2.080 CPU sec, 2.081 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 293334, 14, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 234, 1001) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2689) [M::mem_pestat] mean and std.dev: (497.45, 648.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3533) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (143, 206, 296) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 602) [M::mem_pestat] mean and std.dev: (228.76, 111.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 755) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (330, 1324, 2506) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6858) [M::mem_pestat] mean and std.dev: (1419.23, 1270.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9034) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 289, 367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 791) [M::mem_pestat] mean and std.dev: (251.65, 123.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1003) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706266 reads in 201.476 CPU sec, 6.385 real sec [M::mem_process_seqs] Processed 712464 reads in 136.559 CPU sec, 4.325 real sec sorting block 103, #reads = 1081178 mem = 536878751 peak = 1152679936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 294053, 6, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 211, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 893) [M::mem_pestat] mean and std.dev: (240.77, 137.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1144) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (143, 209, 303) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 623) [M::mem_pestat] mean and std.dev: (233.29, 116.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 783) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 250, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 667) [M::mem_pestat] mean and std.dev: (221.92, 73.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 828) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::process] read 709416 sequences (100000199 bp) in 2.614 CPU sec, 2.678 real sec... [M::process] read 708590 sequences (100000035 bp) in 1.800 CPU sec, 1.804 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 293189, 16, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 224, 444) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 980) [M::mem_pestat] mean and std.dev: (277.31, 167.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1248) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 211, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 631) [M::mem_pestat] mean and std.dev: (236.28, 117.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 793) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (695, 1740, 2225) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5285) [M::mem_pestat] mean and std.dev: (1555.20, 919.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6815) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 233, 828) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2142) [M::mem_pestat] mean and std.dev: (438.93, 399.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2799) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 711936 reads in 198.308 CPU sec, 6.303 real sec sorting block 104, #reads = 1080758 mem = 536886561 peak = 1152679936 [M::mem_process_seqs] Processed 710430 reads in 129.803 CPU sec, 4.130 real sec sorting block 105, #reads = 1082798 mem = 536878155 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 292985, 14, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 288, 1191) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3233) [M::mem_pestat] mean and std.dev: (476.03, 495.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4254) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 213, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 644) [M::mem_pestat] mean and std.dev: (239.10, 119.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 810) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (308, 419, 2779) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7721) [M::mem_pestat] mean and std.dev: (925.85, 1060.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10192) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 220, 428) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 912) [M::mem_pestat] mean and std.dev: (259.23, 142.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1154) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706582 sequences (100000262 bp) in 2.900 CPU sec, 2.979 real sec... [M::process] read 705996 sequences (100000295 bp) in 1.859 CPU sec, 1.860 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (45, 292609, 20, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 268, 791) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2069) [M::mem_pestat] mean and std.dev: (421.02, 347.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2708) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 216, 316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (241.96, 121.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 823) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (279, 506, 1462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3828) [M::mem_pestat] mean and std.dev: (810.50, 880.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5011) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 244, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 719) [M::mem_pestat] mean and std.dev: (270.00, 132.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 900) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 709416 reads in 185.266 CPU sec, 5.870 real sec [M::mem_process_seqs] Processed 708590 reads in 121.364 CPU sec, 3.847 real sec sorting block 106, #reads = 1083788 mem = 536879105 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 291947, 22, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 237, 495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1145) [M::mem_pestat] mean and std.dev: (322.51, 240.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1470) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 666) [M::mem_pestat] mean and std.dev: (246.26, 123.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 838) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (523, 1118, 2020) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5014) [M::mem_pestat] mean and std.dev: (1229.14, 1092.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6511) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 192, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 928) [M::mem_pestat] mean and std.dev: (249.15, 182.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1186) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705396 sequences (100000124 bp) in 2.955 CPU sec, 3.036 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 292416, 10, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 307, 1401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3815) [M::mem_pestat] mean and std.dev: (712.73, 721.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5022) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 221, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 676) [M::mem_pestat] mean and std.dev: (248.17, 124.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 851) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (340, 340, 1197) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2911) [M::mem_pestat] mean and std.dev: (705.00, 680.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3768) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 319, 470) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 972) [M::mem_pestat] mean and std.dev: (328.67, 160.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1223) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704144 sequences (100000247 bp) in 2.000 CPU sec, 1.993 real sec... [M::mem_process_seqs] Processed 706582 reads in 180.169 CPU sec, 5.696 real sec [M::mem_process_seqs] Processed 705996 reads in 117.049 CPU sec, 3.697 real sec sorting block 107, #reads = 1083104 mem = 536879498 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (53, 291655, 16, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 366, 603) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1429) [M::mem_pestat] mean and std.dev: (335.93, 198.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1842) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 224, 329) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 685) [M::mem_pestat] mean and std.dev: (250.39, 125.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 863) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (293, 1085, 1561) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4097) [M::mem_pestat] mean and std.dev: (1021.47, 754.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5365) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 235, 404) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 864) [M::mem_pestat] mean and std.dev: (285.55, 153.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1094) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703760 sequences (100000142 bp) in 2.729 CPU sec, 2.815 real sec... [M::process] read 703286 sequences (100000137 bp) in 1.639 CPU sec, 1.636 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 291332, 11, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 197, 273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 509) [M::mem_pestat] mean and std.dev: (184.87, 62.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 627) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 226, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 690) [M::mem_pestat] mean and std.dev: (252.87, 126.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 869) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (676, 718, 1613) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3487) [M::mem_pestat] mean and std.dev: (1072.91, 819.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4424) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 296, 400) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 818) [M::mem_pestat] mean and std.dev: (280.83, 159.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1027) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705396 reads in 174.316 CPU sec, 5.532 real sec sorting block 108, #reads = 1083214 mem = 536877236 peak = 1166229504 [M::mem_process_seqs] Processed 704144 reads in 113.881 CPU sec, 3.603 real sec sorting block 109, #reads = 1084097 mem = 536879565 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 290971, 15, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 208, 490) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1166) [M::mem_pestat] mean and std.dev: (279.29, 211.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1504) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 228, 333) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 693) [M::mem_pestat] mean and std.dev: (253.50, 127.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 873) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (217, 744, 1170) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3076) [M::mem_pestat] mean and std.dev: (605.75, 440.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4029) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 267, 425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 887) [M::mem_pestat] mean and std.dev: (296.86, 161.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1118) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703000 sequences (100000012 bp) in 2.466 CPU sec, 2.540 real sec... [M::process] read 702838 sequences (100000207 bp) in 1.599 CPU sec, 1.596 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 291033, 28, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 414, 1299) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3565) [M::mem_pestat] mean and std.dev: (710.20, 724.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4698) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 229, 338) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 706) [M::mem_pestat] mean and std.dev: (256.14, 128.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 890) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (442, 1175, 2693) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7195) [M::mem_pestat] mean and std.dev: (1755.54, 1781.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9446) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 265, 542) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1246) [M::mem_pestat] mean and std.dev: (362.02, 234.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1598) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703760 reads in 168.371 CPU sec, 5.347 real sec [M::mem_process_seqs] Processed 703286 reads in 109.447 CPU sec, 3.468 real sec sorting block 110, #reads = 1083206 mem = 536877447 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 290731, 19, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 304, 641) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1607) [M::mem_pestat] mean and std.dev: (390.19, 311.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2090) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 230, 338) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 704) [M::mem_pestat] mean and std.dev: (256.45, 129.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 887) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (60, 682, 2253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6639) [M::mem_pestat] mean and std.dev: (891.76, 921.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8832) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 291, 627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1499) [M::mem_pestat] mean and std.dev: (282.55, 160.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1935) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702102 sequences (100000188 bp) in 2.532 CPU sec, 2.620 real sec... [M::process] read 702386 sequences (100000123 bp) in 1.639 CPU sec, 1.634 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 290835, 22, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (136, 195, 305) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 643) [M::mem_pestat] mean and std.dev: (196.12, 99.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 812) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 231, 338) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 704) [M::mem_pestat] mean and std.dev: (256.98, 129.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 887) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (464, 697, 868) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1676) [M::mem_pestat] mean and std.dev: (640.95, 372.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2129) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 253, 411) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 853) [M::mem_pestat] mean and std.dev: (267.50, 110.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1074) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703000 reads in 166.449 CPU sec, 5.280 real sec sorting block 111, #reads = 1084908 mem = 536878832 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 290460, 17, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 395, 574) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1348) [M::mem_pestat] mean and std.dev: (386.12, 253.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1735) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 233, 340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 708) [M::mem_pestat] mean and std.dev: (258.58, 129.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 892) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (224, 484, 818) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2006) [M::mem_pestat] mean and std.dev: (528.56, 381.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2600) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 339, 711) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1687) [M::mem_pestat] mean and std.dev: (383.17, 294.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2175) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701528 sequences (100000160 bp) in 2.132 CPU sec, 2.141 real sec... [M::mem_process_seqs] Processed 702102 reads in 96.536 CPU sec, 3.309 real sec [M::mem_process_seqs] Processed 702838 reads in 226.866 CPU sec, 7.447 real sec sorting block 112, #reads = 1085887 mem = 536879597 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 290921, 19, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 264, 754) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1906) [M::mem_pestat] mean and std.dev: (446.57, 469.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2482) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 231, 338) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 702) [M::mem_pestat] mean and std.dev: (257.03, 129.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 884) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (470, 704, 1203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2669) [M::mem_pestat] mean and std.dev: (811.67, 557.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3402) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (267, 310, 1043) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2595) [M::mem_pestat] mean and std.dev: (506.93, 506.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3371) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701278 sequences (100000252 bp) in 2.715 CPU sec, 2.812 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 290564, 14, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (153, 206, 637) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1605) [M::mem_pestat] mean and std.dev: (362.38, 328.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2089) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 233, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 712) [M::mem_pestat] mean and std.dev: (259.61, 130.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 897) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (301, 823, 2383) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6547) [M::mem_pestat] mean and std.dev: (1391.14, 1425.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8629) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 349, 848) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2116) [M::mem_pestat] mean and std.dev: (616.20, 564.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2874) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 702386 reads in 180.982 CPU sec, 5.737 real sec [M::process] read 700636 sequences (100000248 bp) in 1.729 CPU sec, 1.752 real sec... [M::mem_process_seqs] Processed 701528 reads in 115.565 CPU sec, 3.658 real sec sorting block 113, #reads = 1085422 mem = 536882406 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 289965, 22, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 287, 745) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1865) [M::mem_pestat] mean and std.dev: (421.09, 451.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2425) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 721) [M::mem_pestat] mean and std.dev: (261.85, 132.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 909) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (626, 1400, 2371) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5861) [M::mem_pestat] mean and std.dev: (1708.14, 1557.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7940) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 247, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 711) [M::mem_pestat] mean and std.dev: (255.74, 112.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 891) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700196 sequences (100000104 bp) in 2.688 CPU sec, 2.808 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (44, 290010, 19, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 223, 398) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 882) [M::mem_pestat] mean and std.dev: (262.26, 170.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1124) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (264.14, 134.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 918) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (519, 858, 1944) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4794) [M::mem_pestat] mean and std.dev: (1168.22, 1096.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6219) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (155, 271, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 755) [M::mem_pestat] mean and std.dev: (268.38, 142.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 955) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699692 sequences (100000054 bp) in 1.500 CPU sec, 1.505 real sec... [M::mem_process_seqs] Processed 701278 reads in 159.264 CPU sec, 5.052 real sec sorting block 114, #reads = 1085129 mem = 536880391 peak = 1166229504 [M::mem_process_seqs] Processed 700636 reads in 102.847 CPU sec, 3.248 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (37, 289949, 15, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 340, 717) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1777) [M::mem_pestat] mean and std.dev: (410.78, 356.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2307) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 238, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (266.07, 135.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (394, 958, 1535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3817) [M::mem_pestat] mean and std.dev: (966.87, 706.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4958) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 288, 527) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1177) [M::mem_pestat] mean and std.dev: (282.40, 168.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1502) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 115, #reads = 1085892 mem = 536884548 peak = 1166229504 [M::process] read 699290 sequences (100000212 bp) in 2.624 CPU sec, 2.721 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 289217, 25, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (172, 272, 614) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1498) [M::mem_pestat] mean and std.dev: (376.10, 295.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1940) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (266.92, 135.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 928) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (364, 818, 1400) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3472) [M::mem_pestat] mean and std.dev: (900.71, 733.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4508) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 241, 681) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1661) [M::mem_pestat] mean and std.dev: (350.35, 317.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2151) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698760 sequences (100000002 bp) in 1.875 CPU sec, 1.885 real sec... [M::mem_process_seqs] Processed 700196 reads in 158.759 CPU sec, 5.027 real sec [M::mem_process_seqs] Processed 699692 reads in 103.682 CPU sec, 3.271 real sec sorting block 116, #reads = 1085209 mem = 536880421 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 289300, 22, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 270, 611) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1487) [M::mem_pestat] mean and std.dev: (371.55, 360.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1925) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 240, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 731) [M::mem_pestat] mean and std.dev: (266.39, 134.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 921) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (505, 1564, 2458) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6364) [M::mem_pestat] mean and std.dev: (1351.10, 1015.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8317) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (245, 382, 808) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1934) [M::mem_pestat] mean and std.dev: (537.08, 444.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2497) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698376 sequences (100000063 bp) in 2.750 CPU sec, 2.854 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 288760, 29, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 226, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1001) [M::mem_pestat] mean and std.dev: (311.53, 210.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1272) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 241, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (268.27, 135.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 933) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (594, 967, 1778) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4146) [M::mem_pestat] mean and std.dev: (1180.97, 784.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5330) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (223, 289, 626) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1432) [M::mem_pestat] mean and std.dev: (375.42, 277.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1835) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698438 sequences (100000068 bp) in 1.719 CPU sec, 1.716 real sec... [M::mem_process_seqs] Processed 699290 reads in 162.683 CPU sec, 5.155 real sec [M::mem_process_seqs] Processed 698760 reads in 107.870 CPU sec, 3.408 real sec sorting block 117, #reads = 1084554 mem = 536878392 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 289054, 17, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 277, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 693) [M::mem_pestat] mean and std.dev: (258.50, 106.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 862) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 741) [M::mem_pestat] mean and std.dev: (269.02, 135.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (141, 453, 1092) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2994) [M::mem_pestat] mean and std.dev: (622.31, 719.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3945) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 316, 767) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1889) [M::mem_pestat] mean and std.dev: (375.70, 281.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2450) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697958 sequences (100000142 bp) in 2.806 CPU sec, 2.921 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 289260, 16, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 277, 544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1270) [M::mem_pestat] mean and std.dev: (333.05, 223.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1633) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 243, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 744) [M::mem_pestat] mean and std.dev: (269.88, 136.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 938) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (307, 513, 2198) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5980) [M::mem_pestat] mean and std.dev: (1261.31, 1606.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7871) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 249, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (249.45, 106.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 818) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697760 sequences (100000197 bp) in 1.490 CPU sec, 1.492 real sec... [M::mem_process_seqs] Processed 698376 reads in 160.795 CPU sec, 5.101 real sec sorting block 118, #reads = 1085121 mem = 536880065 peak = 1166229504 [M::mem_process_seqs] Processed 698438 reads in 105.736 CPU sec, 3.349 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 289160, 11, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 292, 462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1100) [M::mem_pestat] mean and std.dev: (267.55, 172.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1419) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 244, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (270.20, 136.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 935) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (860, 963, 1843) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3809) [M::mem_pestat] mean and std.dev: (1134.30, 753.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4792) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 291, 625) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1525) [M::mem_pestat] mean and std.dev: (413.10, 294.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1975) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697516 sequences (100000039 bp) in 2.726 CPU sec, 2.810 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 288731, 18, 36) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (248, 384, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1082) [M::mem_pestat] mean and std.dev: (333.95, 149.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1360) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 245, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 751) [M::mem_pestat] mean and std.dev: (271.80, 137.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 947) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (578, 951, 1425) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3119) [M::mem_pestat] mean and std.dev: (1117.94, 917.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4789) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (148, 242, 368) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 808) [M::mem_pestat] mean and std.dev: (212.87, 98.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1028) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703760 sequences (100000152 bp) in 1.689 CPU sec, 1.686 real sec... [M::mem_process_seqs] Processed 697958 reads in 159.919 CPU sec, 5.070 real sec sorting block 119, #reads = 1084039 mem = 536883680 peak = 1166229504 [M::mem_process_seqs] Processed 697760 reads in 106.272 CPU sec, 3.357 real sec sorting block 120, #reads = 1084190 mem = 536879708 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (38, 288844, 24, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 295, 884) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2298) [M::mem_pestat] mean and std.dev: (654.74, 672.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3345) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 245, 360) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 754) [M::mem_pestat] mean and std.dev: (272.49, 138.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 951) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (351, 807, 1174) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2820) [M::mem_pestat] mean and std.dev: (703.14, 437.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3643) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 229, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 739) [M::mem_pestat] mean and std.dev: (250.96, 124.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 928) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706592 sequences (100000301 bp) in 2.756 CPU sec, 2.827 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (73, 290106, 20, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 307, 579) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1369) [M::mem_pestat] mean and std.dev: (297.05, 162.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1764) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 227, 332) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 690) [M::mem_pestat] mean and std.dev: (253.29, 128.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 869) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (266, 774, 1230) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3158) [M::mem_pestat] mean and std.dev: (799.05, 605.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4122) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 261, 412) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 858) [M::mem_pestat] mean and std.dev: (284.38, 144.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1081) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705740 sequences (100000280 bp) in 2.294 CPU sec, 2.304 real sec... [M::mem_process_seqs] Processed 697516 reads in 180.013 CPU sec, 5.696 real sec [M::mem_process_seqs] Processed 703760 reads in 127.056 CPU sec, 4.006 real sec sorting block 121, #reads = 1079707 mem = 536880958 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 291742, 19, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 282, 749) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1927) [M::mem_pestat] mean and std.dev: (392.37, 355.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2516) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 219, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 660) [M::mem_pestat] mean and std.dev: (244.87, 122.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 830) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (532, 801, 2165) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5431) [M::mem_pestat] mean and std.dev: (977.65, 763.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7064) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 411, 831) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2129) [M::mem_pestat] mean and std.dev: (512.07, 475.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2778) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703786 sequences (100000163 bp) in 2.638 CPU sec, 2.737 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 291582, 12, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (133, 227, 540) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1354) [M::mem_pestat] mean and std.dev: (281.38, 187.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1761) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 223, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 679) [M::mem_pestat] mean and std.dev: (249.31, 125.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 855) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (546, 1248, 3714) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10050) [M::mem_pestat] mean and std.dev: (2137.17, 2331.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13218) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 242, 439) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 965) [M::mem_pestat] mean and std.dev: (287.18, 160.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1228) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703398 sequences (100000084 bp) in 1.939 CPU sec, 1.939 real sec... [M::mem_process_seqs] Processed 706592 reads in 163.721 CPU sec, 5.179 real sec [M::mem_process_seqs] Processed 705740 reads in 107.743 CPU sec, 3.395 real sec sorting block 122, #reads = 1079370 mem = 536880466 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 291057, 18, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 268, 521) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1231) [M::mem_pestat] mean and std.dev: (290.32, 180.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1586) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 228, 334) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 696) [M::mem_pestat] mean and std.dev: (253.96, 128.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 877) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (184, 617, 1462) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4018) [M::mem_pestat] mean and std.dev: (962.72, 929.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5296) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (187, 306, 427) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 907) [M::mem_pestat] mean and std.dev: (292.03, 122.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1147) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703180 sequences (100000133 bp) in 2.361 CPU sec, 2.448 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 290924, 14, 41) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 451, 916) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2336) [M::mem_pestat] mean and std.dev: (614.35, 536.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3046) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 229, 336) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 700) [M::mem_pestat] mean and std.dev: (255.27, 128.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 882) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (436, 782, 1289) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2995) [M::mem_pestat] mean and std.dev: (818.92, 558.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3848) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 315, 640) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1524) [M::mem_pestat] mean and std.dev: (389.08, 289.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1966) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702538 sequences (100000019 bp) in 1.550 CPU sec, 1.557 real sec... [M::mem_process_seqs] Processed 703786 reads in 157.345 CPU sec, 5.005 real sec sorting block 123, #reads = 1088996 mem = 536877754 peak = 1166229504 [M::mem_process_seqs] Processed 703398 reads in 102.243 CPU sec, 3.235 real sec sorting block 124, #reads = 1089105 mem = 536883944 peak = 1166229504 [M::process] read 701638 sequences (100000084 bp) in 2.359 CPU sec, 2.433 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 290719, 22, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 279, 834) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2148) [M::mem_pestat] mean and std.dev: (399.00, 331.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2805) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 232, 340) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 708) [M::mem_pestat] mean and std.dev: (258.06, 130.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 892) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (77, 906, 2752) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8102) [M::mem_pestat] mean and std.dev: (1377.55, 1518.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10777) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 320, 655) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1559) [M::mem_pestat] mean and std.dev: (453.02, 346.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2011) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701494 sequences (100000196 bp) in 1.660 CPU sec, 1.655 real sec... [M::mem_process_seqs] Processed 702538 reads in 84.448 CPU sec, 2.651 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 291075, 9, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 282, 562) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1354) [M::mem_pestat] mean and std.dev: (336.33, 221.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1750) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (155, 230, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 701) [M::mem_pestat] mean and std.dev: (256.18, 129.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 883) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (162, 358, 436) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 984) [M::mem_pestat] mean and std.dev: (312.20, 191.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1258) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 290481, 15, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 198, 416) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 992) [M::mem_pestat] mean and std.dev: (244.06, 181.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1280) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 233, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 711) [M::mem_pestat] mean and std.dev: (259.25, 130.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 896) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (435, 720, 732) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1326) [M::mem_pestat] mean and std.dev: (531.54, 246.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1623) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (167, 261, 1018) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2720) [M::mem_pestat] mean and std.dev: (640.59, 674.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3571) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701426 sequences (100000134 bp) in 1.985 CPU sec, 1.993 real sec... [M::mem_process_seqs] Processed 703180 reads in 239.713 CPU sec, 7.594 real sec sorting block 125, #reads = 1089422 mem = 536882599 peak = 1166229504 [M::mem_process_seqs] Processed 701638 reads in 118.067 CPU sec, 3.740 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (46, 289979, 20, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 290, 605) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1501) [M::mem_pestat] mean and std.dev: (340.38, 273.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1949) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 234, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 712) [M::mem_pestat] mean and std.dev: (259.74, 130.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 897) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (511, 1217, 2094) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5260) [M::mem_pestat] mean and std.dev: (1011.53, 916.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6843) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 378, 811) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2053) [M::mem_pestat] mean and std.dev: (364.98, 262.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2674) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 126, #reads = 1089389 mem = 536880643 peak = 1166229504 [M::process] read 700724 sequences (100000063 bp) in 2.629 CPU sec, 2.718 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 290155, 9, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 276, 440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 968) [M::mem_pestat] mean and std.dev: (282.53, 153.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1232) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 718) [M::mem_pestat] mean and std.dev: (260.62, 131.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 905) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 268, 333) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 611) [M::mem_pestat] mean and std.dev: (235.69, 75.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 750) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 701494 reads in 158.095 CPU sec, 5.020 real sec [M::process] read 700270 sequences (100000116 bp) in 1.860 CPU sec, 1.859 real sec... [M::mem_process_seqs] Processed 701426 reads in 104.280 CPU sec, 3.305 real sec sorting block 127, #reads = 1087260 mem = 536889236 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (49, 289998, 13, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 242, 528) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1244) [M::mem_pestat] mean and std.dev: (305.69, 206.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1602) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 237, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 725) [M::mem_pestat] mean and std.dev: (262.57, 131.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 914) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (41, 562, 3294) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9800) [M::mem_pestat] mean and std.dev: (1373.23, 1600.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13053) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 274, 593) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1367) [M::mem_pestat] mean and std.dev: (350.58, 231.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1754) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700160 sequences (100000178 bp) in 2.705 CPU sec, 2.831 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (35, 290069, 18, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (167, 218, 481) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1109) [M::mem_pestat] mean and std.dev: (295.84, 231.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1423) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 238, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 729) [M::mem_pestat] mean and std.dev: (263.90, 132.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 919) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (185, 534, 1471) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4043) [M::mem_pestat] mean and std.dev: (774.00, 819.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5329) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (164, 283, 539) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1289) [M::mem_pestat] mean and std.dev: (360.31, 269.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1664) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700324 sequences (100000268 bp) in 1.659 CPU sec, 1.655 real sec... [M::mem_process_seqs] Processed 700724 reads in 153.678 CPU sec, 4.864 real sec [M::mem_process_seqs] Processed 700270 reads in 102.276 CPU sec, 3.227 real sec sorting block 128, #reads = 1086705 mem = 536879096 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 289543, 21, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 275, 759) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1953) [M::mem_pestat] mean and std.dev: (463.85, 422.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2550) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 238, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 729) [M::mem_pestat] mean and std.dev: (264.58, 133.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 919) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (87, 177, 3052) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8982) [M::mem_pestat] mean and std.dev: (1075.57, 1270.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11947) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 269, 339) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 637) [M::mem_pestat] mean and std.dev: (240.10, 76.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 786) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 701596 sequences (100000044 bp) in 2.642 CPU sec, 2.743 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 290004, 14, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 254, 392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 872) [M::mem_pestat] mean and std.dev: (253.68, 117.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1112) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 238, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 726) [M::mem_pestat] mean and std.dev: (264.14, 132.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 915) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (966, 1370, 3109) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7395) [M::mem_pestat] mean and std.dev: (2018.57, 1303.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9538) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (154, 327, 483) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1141) [M::mem_pestat] mean and std.dev: (321.66, 198.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1470) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700160 reads in 150.160 CPU sec, 4.763 real sec [M::process] read 700824 sequences (100000034 bp) in 1.867 CPU sec, 1.896 real sec... [M::mem_process_seqs] Processed 700324 reads in 98.394 CPU sec, 3.090 real sec sorting block 129, #reads = 1088511 mem = 536877976 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 290631, 21, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (225, 512, 1043) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2679) [M::mem_pestat] mean and std.dev: (662.80, 558.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3497) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (157, 233, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 709) [M::mem_pestat] mean and std.dev: (259.11, 130.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 893) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (565, 982, 2038) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4984) [M::mem_pestat] mean and std.dev: (1086.65, 693.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6457) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 277, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1156) [M::mem_pestat] mean and std.dev: (361.93, 233.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1476) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 130, #reads = 1088690 mem = 536880148 peak = 1166229504 [M::process] read 700700 sequences (100000000 bp) in 2.612 CPU sec, 2.736 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (52, 290362, 13, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 235, 296) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 574) [M::mem_pestat] mean and std.dev: (220.24, 97.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 713) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 236, 346) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 722) [M::mem_pestat] mean and std.dev: (262.12, 132.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 910) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (503, 1066, 2202) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5600) [M::mem_pestat] mean and std.dev: (942.82, 574.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7299) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (308, 467, 1033) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2483) [M::mem_pestat] mean and std.dev: (563.18, 446.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3208) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700476 sequences (100000073 bp) in 1.460 CPU sec, 1.462 real sec... [M::mem_process_seqs] Processed 701596 reads in 155.416 CPU sec, 4.934 real sec [M::mem_process_seqs] Processed 700824 reads in 103.358 CPU sec, 3.270 real sec sorting block 131, #reads = 1088034 mem = 536881883 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 290217, 24, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 321, 465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1093) [M::mem_pestat] mean and std.dev: (302.64, 203.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1407) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 237, 348) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 728) [M::mem_pestat] mean and std.dev: (263.26, 133.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 918) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (287, 454, 598) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1220) [M::mem_pestat] mean and std.dev: (415.09, 256.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1531) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 311, 1032) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2734) [M::mem_pestat] mean and std.dev: (422.25, 393.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3585) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699180 sequences (100000205 bp) in 2.923 CPU sec, 3.007 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (74, 289841, 14, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 306, 1263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3447) [M::mem_pestat] mean and std.dev: (632.61, 628.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4539) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 236, 347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 723) [M::mem_pestat] mean and std.dev: (263.12, 132.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 911) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (81, 846, 960) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2718) [M::mem_pestat] mean and std.dev: (700.69, 596.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3597) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 342, 837) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2055) [M::mem_pestat] mean and std.dev: (519.55, 431.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2664) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700700 reads in 159.091 CPU sec, 5.040 real sec [M::process] read 699070 sequences (100000117 bp) in 1.893 CPU sec, 1.900 real sec... [M::mem_process_seqs] Processed 700476 reads in 113.526 CPU sec, 3.610 real sec sorting block 132, #reads = 1086723 mem = 536881639 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (56, 289082, 20, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 261, 516) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1176) [M::mem_pestat] mean and std.dev: (330.54, 239.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1506) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 240, 351) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 731) [M::mem_pestat] mean and std.dev: (266.11, 133.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 921) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (172, 995, 1877) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5287) [M::mem_pestat] mean and std.dev: (847.65, 752.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6992) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 335, 857) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2171) [M::mem_pestat] mean and std.dev: (507.70, 514.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2828) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698920 sequences (100000002 bp) in 2.593 CPU sec, 2.688 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 288753, 19, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (212, 268, 749) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1823) [M::mem_pestat] mean and std.dev: (445.09, 376.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2360) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 242, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (268.35, 135.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 933) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (351, 367, 1171) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2811) [M::mem_pestat] mean and std.dev: (597.94, 610.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3631) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (174, 240, 489) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1119) [M::mem_pestat] mean and std.dev: (284.90, 155.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1434) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699180 reads in 158.244 CPU sec, 5.017 real sec [M::process] read 698614 sequences (100000123 bp) in 1.878 CPU sec, 1.888 real sec... [M::mem_process_seqs] Processed 699070 reads in 107.930 CPU sec, 3.403 real sec sorting block 133, #reads = 1085597 mem = 536877107 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 289878, 18, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 355, 522) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1102) [M::mem_pestat] mean and std.dev: (352.69, 182.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1392) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 242, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (268.57, 136.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 933) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (350, 709, 1446) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3638) [M::mem_pestat] mean and std.dev: (940.72, 785.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4734) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (242, 348, 2013) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5555) [M::mem_pestat] mean and std.dev: (1252.52, 1549.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7452) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698370 sequences (100000272 bp) in 2.479 CPU sec, 2.568 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 289067, 17, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 369, 509) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1173) [M::mem_pestat] mean and std.dev: (355.29, 175.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1505) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 738) [M::mem_pestat] mean and std.dev: (268.49, 135.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 930) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (355, 927, 1434) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3592) [M::mem_pestat] mean and std.dev: (889.18, 656.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4671) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (168, 260, 711) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1797) [M::mem_pestat] mean and std.dev: (417.41, 349.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2340) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698332 sequences (100000249 bp) in 1.829 CPU sec, 1.834 real sec... [M::mem_process_seqs] Processed 698920 reads in 163.678 CPU sec, 5.190 real sec sorting block 134, #reads = 1085927 mem = 536881990 peak = 1166229504 [M::mem_process_seqs] Processed 698614 reads in 110.506 CPU sec, 3.491 real sec sorting block 135, #reads = 1084044 mem = 536878189 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 289016, 26, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 410, 740) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1790) [M::mem_pestat] mean and std.dev: (488.29, 352.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2315) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 741) [M::mem_pestat] mean and std.dev: (268.91, 135.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 934) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (159, 868, 2740) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7902) [M::mem_pestat] mean and std.dev: (1238.88, 1592.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10483) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 309, 872) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2168) [M::mem_pestat] mean and std.dev: (477.29, 389.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2816) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698924 sequences (100000300 bp) in 2.618 CPU sec, 2.715 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 289229, 14, 46) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (139, 238, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1081) [M::mem_pestat] mean and std.dev: (286.31, 219.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1395) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 241, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (268.20, 135.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 926) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (350, 2162, 2575) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7025) [M::mem_pestat] mean and std.dev: (1478.69, 1020.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9250) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 351, 666) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1692) [M::mem_pestat] mean and std.dev: (366.66, 298.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2205) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697878 sequences (100000152 bp) in 1.860 CPU sec, 1.856 real sec... [M::mem_process_seqs] Processed 698370 reads in 165.049 CPU sec, 5.226 real sec [M::mem_process_seqs] Processed 698332 reads in 109.461 CPU sec, 3.455 real sec sorting block 136, #reads = 1084449 mem = 536879558 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 289429, 34, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 337, 559) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1291) [M::mem_pestat] mean and std.dev: (327.71, 242.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1657) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 239, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 725) [M::mem_pestat] mean and std.dev: (265.30, 133.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 913) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (170, 670, 1303) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3569) [M::mem_pestat] mean and std.dev: (784.72, 747.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4702) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (171, 268, 603) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1467) [M::mem_pestat] mean and std.dev: (340.61, 238.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1899) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697936 sequences (100000203 bp) in 2.609 CPU sec, 2.673 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 288473, 23, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (205, 278, 430) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 880) [M::mem_pestat] mean and std.dev: (294.20, 150.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1105) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 244, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (269.40, 135.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (377, 679, 1090) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2516) [M::mem_pestat] mean and std.dev: (762.83, 537.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3229) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (203, 346, 526) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1172) [M::mem_pestat] mean and std.dev: (404.79, 293.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1579) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697604 sequences (100000097 bp) in 1.820 CPU sec, 1.822 real sec... [M::mem_process_seqs] Processed 698924 reads in 165.100 CPU sec, 5.318 real sec [M::mem_process_seqs] Processed 697878 reads in 107.235 CPU sec, 3.380 real sec sorting block 137, #reads = 1084705 mem = 536881447 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 288733, 15, 47) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (143, 267, 572) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1430) [M::mem_pestat] mean and std.dev: (350.25, 341.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1859) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 243, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (269.00, 134.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (459, 1168, 1365) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3177) [M::mem_pestat] mean and std.dev: (860.54, 687.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4083) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 299, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 697) [M::mem_pestat] mean and std.dev: (269.79, 123.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 871) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698200 sequences (100000200 bp) in 2.269 CPU sec, 2.350 real sec... [M::process] read 697754 sequences (100000089 bp) in 1.809 CPU sec, 1.806 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 288214, 17, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 317, 802) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2084) [M::mem_pestat] mean and std.dev: (495.39, 530.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2725) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 243, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (269.31, 135.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (494, 2451, 3241) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8735) [M::mem_pestat] mean and std.dev: (1948.06, 1415.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11482) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (153, 281, 459) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1071) [M::mem_pestat] mean and std.dev: (266.31, 161.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1377) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697936 reads in 168.888 CPU sec, 5.452 real sec sorting block 138, #reads = 1083606 mem = 536878904 peak = 1166229504 [M::mem_process_seqs] Processed 697604 reads in 110.421 CPU sec, 3.500 real sec sorting block 139, #reads = 1082350 mem = 536877273 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 288509, 16, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 262, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 917) [M::mem_pestat] mean and std.dev: (289.05, 172.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1166) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 732) [M::mem_pestat] mean and std.dev: (267.89, 134.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 922) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (79, 470, 1549) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4489) [M::mem_pestat] mean and std.dev: (836.75, 987.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5959) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (248, 364, 578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1238) [M::mem_pestat] mean and std.dev: (393.20, 227.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1568) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697724 sequences (100000227 bp) in 2.594 CPU sec, 2.664 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 288404, 23, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 232, 627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1563) [M::mem_pestat] mean and std.dev: (363.64, 303.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2031) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 244, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 745) [M::mem_pestat] mean and std.dev: (270.62, 136.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 939) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (488, 592, 7347) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 21065) [M::mem_pestat] mean and std.dev: (2768.13, 3173.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 27924) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (200, 383, 1226) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3278) [M::mem_pestat] mean and std.dev: (662.46, 769.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4304) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705954 sequences (100000258 bp) in 1.919 CPU sec, 1.920 real sec... [M::mem_process_seqs] Processed 698200 reads in 167.901 CPU sec, 5.312 real sec [M::mem_process_seqs] Processed 697754 reads in 112.097 CPU sec, 3.540 real sec sorting block 140, #reads = 1081094 mem = 536884401 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 288389, 28, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 309, 601) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1437) [M::mem_pestat] mean and std.dev: (426.21, 367.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1898) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 243, 355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 739) [M::mem_pestat] mean and std.dev: (269.83, 136.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 931) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (224, 716, 1571) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4265) [M::mem_pestat] mean and std.dev: (953.96, 974.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5612) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 324, 577) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1293) [M::mem_pestat] mean and std.dev: (379.96, 234.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1651) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 714626 sequences (100000249 bp) in 2.822 CPU sec, 2.899 real sec... [M::process] read 710538 sequences (100000156 bp) in 1.949 CPU sec, 1.944 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 290703, 31, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 326, 464) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1020) [M::mem_pestat] mean and std.dev: (325.34, 169.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1298) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 666) [M::mem_pestat] mean and std.dev: (246.19, 124.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 838) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (1173, 1242, 2330) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4644) [M::mem_pestat] mean and std.dev: (1434.04, 982.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5801) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 335, 498) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1084) [M::mem_pestat] mean and std.dev: (351.71, 203.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1377) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697724 reads in 196.999 CPU sec, 6.251 real sec sorting block 141, #reads = 1076824 mem = 536878398 peak = 1166229504 [M::mem_process_seqs] Processed 705954 reads in 138.036 CPU sec, 4.379 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 294456, 14, 43) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 235, 769) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1983) [M::mem_pestat] mean and std.dev: (448.55, 423.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2590) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (140, 202, 293) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 599) [M::mem_pestat] mean and std.dev: (226.17, 111.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 752) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (364, 483, 1267) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3073) [M::mem_pestat] mean and std.dev: (613.85, 462.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3976) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (151, 278, 532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1294) [M::mem_pestat] mean and std.dev: (316.47, 234.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1675) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707890 sequences (100000087 bp) in 2.950 CPU sec, 3.007 real sec... [M::process] read 706746 sequences (100000044 bp) in 1.889 CPU sec, 1.898 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 292897, 16, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (155, 272, 419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 947) [M::mem_pestat] mean and std.dev: (249.02, 117.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1211) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 212, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 640) [M::mem_pestat] mean and std.dev: (237.78, 119.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 805) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (711, 840, 3387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8739) [M::mem_pestat] mean and std.dev: (1689.19, 1462.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11415) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 279, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 937) [M::mem_pestat] mean and std.dev: (296.05, 165.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1179) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 714626 reads in 196.797 CPU sec, 6.236 real sec sorting block 142, #reads = 1075924 mem = 536883143 peak = 1166229504 [M::mem_process_seqs] Processed 710538 reads in 219.255 CPU sec, 6.968 real sec sorting block 143, #reads = 1083019 mem = 536877850 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (34, 292381, 16, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 288, 1375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3799) [M::mem_pestat] mean and std.dev: (707.74, 704.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5011) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 218, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 661) [M::mem_pestat] mean and std.dev: (243.58, 122.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 832) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (209, 591, 1115) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2927) [M::mem_pestat] mean and std.dev: (636.80, 480.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3833) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 319, 682) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1662) [M::mem_pestat] mean and std.dev: (439.24, 389.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2152) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705762 sequences (100000264 bp) in 2.703 CPU sec, 2.780 real sec... [M::process] read 704520 sequences (100000157 bp) in 1.660 CPU sec, 1.652 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (33, 292143, 25, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (138, 221, 375) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 849) [M::mem_pestat] mean and std.dev: (227.25, 149.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1086) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 221, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 678) [M::mem_pestat] mean and std.dev: (248.26, 125.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 854) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (591, 761, 999) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1815) [M::mem_pestat] mean and std.dev: (835.64, 462.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2684) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (170, 232, 452) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1016) [M::mem_pestat] mean and std.dev: (278.38, 153.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1298) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707890 reads in 187.352 CPU sec, 5.952 real sec [M::mem_process_seqs] Processed 706746 reads in 126.348 CPU sec, 4.038 real sec sorting block 144, #reads = 1083200 mem = 536886188 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 291922, 23, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (180, 262, 933) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2439) [M::mem_pestat] mean and std.dev: (555.90, 553.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3192) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 223, 327) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 679) [M::mem_pestat] mean and std.dev: (249.73, 126.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 855) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (416, 657, 1326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3146) [M::mem_pestat] mean and std.dev: (739.77, 586.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4056) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 280, 391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 805) [M::mem_pestat] mean and std.dev: (261.85, 132.65) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1012) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703694 sequences (100000044 bp) in 2.782 CPU sec, 2.923 real sec... [M::process] read 703114 sequences (100000107 bp) in 1.953 CPU sec, 1.960 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 291204, 13, 59) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 260, 1253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3445) [M::mem_pestat] mean and std.dev: (670.97, 882.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4541) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 227, 333) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 693) [M::mem_pestat] mean and std.dev: (253.27, 127.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 873) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (488, 897, 2791) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7397) [M::mem_pestat] mean and std.dev: (1184.33, 1237.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9700) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 335, 534) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1146) [M::mem_pestat] mean and std.dev: (383.74, 252.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1452) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705762 reads in 190.501 CPU sec, 6.079 real sec [M::mem_process_seqs] Processed 704520 reads in 125.913 CPU sec, 4.036 real sec sorting block 145, #reads = 1083538 mem = 536881490 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 291068, 15, 42) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 288, 446) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 950) [M::mem_pestat] mean and std.dev: (319.28, 176.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1202) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 229, 337) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 703) [M::mem_pestat] mean and std.dev: (256.08, 129.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 886) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (192, 516, 1164) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3108) [M::mem_pestat] mean and std.dev: (577.73, 516.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4080) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (172, 246, 450) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1006) [M::mem_pestat] mean and std.dev: (291.28, 182.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1284) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 702326 sequences (100000052 bp) in 2.691 CPU sec, 2.813 real sec... [M::process] read 701434 sequences (100000059 bp) in 1.691 CPU sec, 1.700 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 290676, 20, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 327, 582) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1372) [M::mem_pestat] mean and std.dev: (311.26, 200.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1767) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (154, 231, 341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 715) [M::mem_pestat] mean and std.dev: (258.31, 131.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 902) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (634, 2114, 3608) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9556) [M::mem_pestat] mean and std.dev: (1945.60, 1390.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12530) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 308, 423) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 873) [M::mem_pestat] mean and std.dev: (287.64, 141.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1098) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703694 reads in 188.843 CPU sec, 6.162 real sec [M::mem_process_seqs] Processed 703114 reads in 124.006 CPU sec, 3.944 real sec sorting block 146, #reads = 1083985 mem = 536878740 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 290575, 14, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (128, 310, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1184) [M::mem_pestat] mean and std.dev: (279.94, 190.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1536) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 233, 344) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 720) [M::mem_pestat] mean and std.dev: (260.00, 131.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 908) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (157, 615, 1986) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5644) [M::mem_pestat] mean and std.dev: (972.86, 986.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7473) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 331, 537) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1251) [M::mem_pestat] mean and std.dev: (313.33, 215.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1608) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 700420 sequences (100000105 bp) in 2.592 CPU sec, 2.801 real sec... [M::process] read 701836 sequences (100000093 bp) in 1.655 CPU sec, 1.659 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 290288, 23, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (142, 291, 759) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1993) [M::mem_pestat] mean and std.dev: (399.17, 408.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2610) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (158, 237, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 731) [M::mem_pestat] mean and std.dev: (263.25, 132.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 922) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (618, 1421, 2380) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5904) [M::mem_pestat] mean and std.dev: (1505.87, 1213.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7666) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 242, 460) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1016) [M::mem_pestat] mean and std.dev: (298.88, 191.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1294) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 702326 reads in 181.813 CPU sec, 5.824 real sec sorting block 147, #reads = 1080518 mem = 536879730 peak = 1166229504 [M::mem_process_seqs] Processed 701434 reads in 123.469 CPU sec, 3.947 real sec sorting block 148, #reads = 1082782 mem = 536877076 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 290377, 26, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 202, 507) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1175) [M::mem_pestat] mean and std.dev: (239.31, 155.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1509) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (159, 239, 352) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 738) [M::mem_pestat] mean and std.dev: (265.65, 134.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 931) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (124, 532, 793) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2131) [M::mem_pestat] mean and std.dev: (455.50, 346.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2800) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 334, 1227) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3301) [M::mem_pestat] mean and std.dev: (723.78, 849.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4338) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699310 sequences (100000031 bp) in 2.662 CPU sec, 2.752 real sec... [M::process] read 699422 sequences (100000242 bp) in 1.777 CPU sec, 1.841 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (70, 289971, 31, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (141, 262, 625) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1593) [M::mem_pestat] mean and std.dev: (379.73, 287.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2077) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (156, 233, 342) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 714) [M::mem_pestat] mean and std.dev: (259.65, 131.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 900) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (260, 392, 1349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3527) [M::mem_pestat] mean and std.dev: (718.86, 752.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4616) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 302, 634) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1518) [M::mem_pestat] mean and std.dev: (343.96, 213.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1960) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 700420 reads in 182.167 CPU sec, 5.819 real sec [M::mem_process_seqs] Processed 701836 reads in 124.218 CPU sec, 3.970 real sec sorting block 149, #reads = 1083107 mem = 536879864 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 289521, 28, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (171, 280, 432) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 954) [M::mem_pestat] mean and std.dev: (297.45, 189.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1215) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 241, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 737) [M::mem_pestat] mean and std.dev: (267.51, 134.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 929) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (193, 479, 1179) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3151) [M::mem_pestat] mean and std.dev: (511.33, 426.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4137) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 295, 376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 734) [M::mem_pestat] mean and std.dev: (270.98, 86.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 913) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 699236 sequences (100000102 bp) in 3.103 CPU sec, 3.253 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (40, 289945, 29, 54) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 249, 724) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1872) [M::mem_pestat] mean and std.dev: (374.81, 367.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2446) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (161, 242, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 746) [M::mem_pestat] mean and std.dev: (268.75, 136.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (51, 367, 996) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2886) [M::mem_pestat] mean and std.dev: (552.58, 671.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3831) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 429, 820) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2006) [M::mem_pestat] mean and std.dev: (483.96, 362.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2599) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699310 reads in 178.032 CPU sec, 5.665 real sec [M::process] read 698664 sequences (100000273 bp) in 2.208 CPU sec, 2.236 real sec... [M::mem_process_seqs] Processed 699422 reads in 120.759 CPU sec, 3.810 real sec sorting block 150, #reads = 1083810 mem = 536878853 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 289311, 29, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 366, 530) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1194) [M::mem_pestat] mean and std.dev: (320.40, 166.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1526) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 241, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 742) [M::mem_pestat] mean and std.dev: (267.90, 135.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 936) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (237, 260, 1072) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2742) [M::mem_pestat] mean and std.dev: (654.00, 680.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3577) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 296, 482) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1050) [M::mem_pestat] mean and std.dev: (305.78, 180.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1334) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 698174 sequences (100000081 bp) in 3.030 CPU sec, 3.150 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 289126, 32, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 202, 869) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2267) [M::mem_pestat] mean and std.dev: (350.53, 400.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2966) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 738) [M::mem_pestat] mean and std.dev: (268.11, 134.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 930) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (641, 872, 1943) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4547) [M::mem_pestat] mean and std.dev: (1164.74, 936.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5849) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (237, 306, 1004) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2538) [M::mem_pestat] mean and std.dev: (551.12, 531.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3305) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 699236 reads in 177.389 CPU sec, 5.651 real sec [M::process] read 697926 sequences (100000206 bp) in 1.997 CPU sec, 2.012 real sec... sorting block 151, #reads = 1083208 mem = 536879064 peak = 1166229504 [M::mem_process_seqs] Processed 698664 reads in 120.491 CPU sec, 3.804 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 289508, 18, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 276, 653) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1561) [M::mem_pestat] mean and std.dev: (326.79, 229.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2015) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 243, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 733) [M::mem_pestat] mean and std.dev: (267.96, 133.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 923) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (522, 1452, 3306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8874) [M::mem_pestat] mean and std.dev: (2132.06, 1735.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11658) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (159, 263, 363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 771) [M::mem_pestat] mean and std.dev: (273.49, 150.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 975) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 152, #reads = 1082765 mem = 536878737 peak = 1166229504 [M::process] read 698122 sequences (100000171 bp) in 2.841 CPU sec, 2.964 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (60, 288499, 20, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (152, 215, 453) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1055) [M::mem_pestat] mean and std.dev: (304.00, 228.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1356) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 242, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 733) [M::mem_pestat] mean and std.dev: (267.89, 133.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 923) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (360, 671, 1766) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4578) [M::mem_pestat] mean and std.dev: (841.32, 789.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5984) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 311, 784) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1880) [M::mem_pestat] mean and std.dev: (443.76, 353.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2428) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697886 sequences (100000080 bp) in 1.582 CPU sec, 1.583 real sec... [M::mem_process_seqs] Processed 698174 reads in 172.421 CPU sec, 5.496 real sec [M::mem_process_seqs] Processed 697926 reads in 114.173 CPU sec, 3.614 real sec sorting block 153, #reads = 1082607 mem = 536879969 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (42, 289144, 16, 48) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (161, 226, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 821) [M::mem_pestat] mean and std.dev: (262.08, 149.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1041) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (162, 242, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 735) [M::mem_pestat] mean and std.dev: (268.41, 134.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 926) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (294, 1063, 2273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6231) [M::mem_pestat] mean and std.dev: (1074.40, 829.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8210) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 357, 791) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1951) [M::mem_pestat] mean and std.dev: (397.61, 340.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2531) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697938 sequences (100000236 bp) in 2.442 CPU sec, 2.525 real sec... [M::process] read 697248 sequences (100000052 bp) in 1.570 CPU sec, 1.571 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 288884, 22, 84) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (177, 380, 778) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1980) [M::mem_pestat] mean and std.dev: (441.28, 435.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2581) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 243, 353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 733) [M::mem_pestat] mean and std.dev: (268.38, 134.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 923) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (220, 935, 1582) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4306) [M::mem_pestat] mean and std.dev: (1046.86, 1068.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5668) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 361, 762) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1890) [M::mem_pestat] mean and std.dev: (502.61, 410.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2454) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 698122 reads in 159.790 CPU sec, 5.070 real sec [M::mem_process_seqs] Processed 697886 reads in 105.251 CPU sec, 3.336 real sec sorting block 154, #reads = 1082969 mem = 536880390 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 288921, 18, 51) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 320, 663) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1681) [M::mem_pestat] mean and std.dev: (422.62, 370.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2190) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (163, 243, 354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 736) [M::mem_pestat] mean and std.dev: (268.93, 134.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 927) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (411, 1167, 2079) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5415) [M::mem_pestat] mean and std.dev: (1069.24, 909.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7083) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (175, 239, 335) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 655) [M::mem_pestat] mean and std.dev: (238.76, 105.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 815) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697436 sequences (100000113 bp) in 2.473 CPU sec, 2.533 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (43, 288519, 21, 44) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 234, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 602) [M::mem_pestat] mean and std.dev: (216.59, 92.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 748) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 246, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (270.87, 135.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 932) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (273, 540, 1320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3414) [M::mem_pestat] mean and std.dev: (714.30, 585.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4461) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 356, 480) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 928) [M::mem_pestat] mean and std.dev: (360.35, 166.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1152) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 697110 sequences (100000184 bp) in 1.800 CPU sec, 1.799 real sec... [M::mem_process_seqs] Processed 697938 reads in 165.142 CPU sec, 5.481 real sec sorting block 155, #reads = 1084022 mem = 536880646 peak = 1166229504 [M::mem_process_seqs] Processed 697248 reads in 104.825 CPU sec, 3.314 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (48, 288809, 19, 53) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 273, 706) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1772) [M::mem_pestat] mean and std.dev: (430.63, 436.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2305) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 246, 356) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 740) [M::mem_pestat] mean and std.dev: (270.62, 135.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 932) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (485, 758, 2263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5819) [M::mem_pestat] mean and std.dev: (1133.11, 848.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7597) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (161, 256, 972) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2594) [M::mem_pestat] mean and std.dev: (543.04, 671.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3405) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 156, #reads = 1082784 mem = 536878477 peak = 1166229504 [M::process] read 697312 sequences (100000075 bp) in 2.274 CPU sec, 2.353 real sec... [M::process] read 696864 sequences (100000168 bp) in 1.480 CPU sec, 1.473 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 289056, 20, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 324, 569) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1327) [M::mem_pestat] mean and std.dev: (370.34, 250.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1706) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 245, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 743) [M::mem_pestat] mean and std.dev: (271.30, 136.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 936) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (664, 1335, 2969) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7579) [M::mem_pestat] mean and std.dev: (1709.80, 1232.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9884) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (188, 266, 642) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1550) [M::mem_pestat] mean and std.dev: (431.88, 374.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2004) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 697436 reads in 159.234 CPU sec, 5.064 real sec [M::mem_process_seqs] Processed 697110 reads in 105.417 CPU sec, 3.347 real sec sorting block 157, #reads = 1084156 mem = 536879050 peak = 1166229504 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 288391, 26, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (163, 271, 537) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1285) [M::mem_pestat] mean and std.dev: (351.06, 287.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1659) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 245, 357) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 743) [M::mem_pestat] mean and std.dev: (270.96, 135.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 936) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (181, 478, 1364) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3730) [M::mem_pestat] mean and std.dev: (816.52, 749.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4913) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 273, 472) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1024) [M::mem_pestat] mean and std.dev: (308.54, 185.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1300) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696692 sequences (100000070 bp) in 2.360 CPU sec, 2.467 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 288339, 16, 40) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 242, 381) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 825) [M::mem_pestat] mean and std.dev: (231.60, 112.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1047) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (164, 246, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 749) [M::mem_pestat] mean and std.dev: (272.42, 136.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 944) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (548, 1037, 1693) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3983) [M::mem_pestat] mean and std.dev: (1075.44, 606.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5128) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 327, 478) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1018) [M::mem_pestat] mean and std.dev: (364.72, 222.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1288) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 696690 sequences (100000005 bp) in 1.810 CPU sec, 1.814 real sec... [M::mem_process_seqs] Processed 697312 reads in 161.808 CPU sec, 5.146 real sec [M::mem_process_seqs] Processed 696864 reads in 103.861 CPU sec, 3.280 real sec sorting block 158, #reads = 1083228 mem = 536878695 peak = 1166229504 [M::process] read 198154 sequences (28329700 bp) in 0.811 CPU sec, 0.827 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (51, 288788, 18, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 315, 487) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1085) [M::mem_pestat] mean and std.dev: (311.73, 186.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1384) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 247, 359) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 747) [M::mem_pestat] mean and std.dev: (272.78, 136.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 941) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (388, 892, 2178) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5758) [M::mem_pestat] mean and std.dev: (1289.41, 1207.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7548) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 254, 479) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 999) [M::mem_pestat] mean and std.dev: (285.94, 143.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1259) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 288153, 25, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (162, 209, 641) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1599) [M::mem_pestat] mean and std.dev: (303.96, 237.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2078) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (165, 247, 361) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 753) [M::mem_pestat] mean and std.dev: (273.64, 137.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 949) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (121, 652, 819) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2215) [M::mem_pestat] mean and std.dev: (527.04, 424.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2913) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (210, 301, 765) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1875) [M::mem_pestat] mean and std.dev: (513.72, 469.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2430) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (24, 81845, 5, 13) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (154, 453, 583) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1441) [M::mem_pestat] mean and std.dev: (460.91, 361.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1906) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (160, 239, 349) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 727) [M::mem_pestat] mean and std.dev: (264.77, 133.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 916) [M::mem_pestat] skip orientation RF as there are not enough pairs [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (180, 284, 818) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2094) [M::mem_pestat] mean and std.dev: (481.69, 501.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2732) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 696692 reads in 177.592 CPU sec, 5.737 real sec [M::mem_process_seqs] Processed 696690 reads in 126.090 CPU sec, 4.071 real sec sorting block 159, #reads = 1084466 mem = 536877266 peak = 1166229504 [M::mem_process_seqs] Processed 198154 reads in 132.248 CPU sec, 4.284 real sec sorting block 160, #reads = 1084648 mem = 536878855 peak = 1229426688 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 173795036 overall: 70144987136 mem 23084.424 user 467.907 sys 768.621 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:A23MHWWLT4.1136_86S-T1-TDNA-1_A23MHWWLT4_1.L005\tPU:L005\tSM:1136_86S-T1-TDNA-1_A23MHWWLT4_1\tLB:1136_86S-T1-TDNA-1_A23MHWWLT4_1\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 1136_86S-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz 1136_86S-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz [main] Real time: 768.663 sec; CPU: 23552.338 sec sorting block 161, #reads = 147637 mem = 73791583 peak = 1229426688 uniq header count 1 merging 162 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000a06d1 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: Intel(R) Xeon(R) 6975P-C threads: 31 max 192 algo: util-sort license: sentieon:util=1 output file size: 9550805732 output reads: 174981855 bam_mem_sort: 162 calls 82.550 user 1.519 sys 84.552 real bam_write: 162 calls 43.004 user 2.582 sys 48.924 real execute: 1 calls 47.935 user 2.404 sys 831.440 real merge_files: 1 calls 47.915 user 2.375 sys 62.725 real parse_chunk: 2579 calls 112.460 user 23.626 sys 139.073 real read_chunk: 6968 calls 57.464 user 53.878 sys 732.900 real sort_block: 1 calls 34.976 user 53.314 sys 702.446 real write_chunk: 4387 calls 47.409 user 1.857 sys 61.349 real overall: 3458940928 mem 2427.234 user 106.060 sys 831.462 real ls: cannot access '*.cram': No such file or directory