This software is licensed to bgold@natera.com by Sentieon Inc. cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/util sort -r Homo_sapiens_assembly38.fasta -t 31 -o 1136_3WJ-T1-TDNA-1_A23MHWWLT4_1.bam --sam2bam - This software is licensed to bgold@natera.com by Sentieon Inc. version: sentieon-genomics-202308.03 [M::bwa_idx_load_from_disk] read 3171 ALT contigs [M::main_mem] bwa index loaded in 1400.923 CPU sec, 50.768 real sec [M::process] read 713196 sequences (100000254 bp) in 1.138 CPU sec, 1.145 real sec... [M::process] read 711412 sequences (100000241 bp) in 1.331 CPU sec, 1.354 real sec... [M::process] read 710628 sequences (100000033 bp) in 1.346 CPU sec, 1.374 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 281864, 46, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (202, 365, 1030) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2686) [M::mem_pestat] mean and std.dev: (597.83, 581.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3514) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (142, 205, 293) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 595) [M::mem_pestat] mean and std.dev: (226.43, 109.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 746) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (377, 795, 1441) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3569) [M::mem_pestat] mean and std.dev: (901.93, 770.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4633) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 607, 1620) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4396) [M::mem_pestat] mean and std.dev: (817.03, 782.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5784) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 710224 sequences (100000149 bp) in 1.567 CPU sec, 1.596 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 282646, 56, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (216, 375, 926) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2346) [M::mem_pestat] mean and std.dev: (484.77, 430.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3056) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (144, 211, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 633) [M::mem_pestat] mean and std.dev: (235.17, 116.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 796) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (210, 528, 2121) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5943) [M::mem_pestat] mean and std.dev: (1154.70, 1515.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7854) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (192, 552, 1025) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2691) [M::mem_pestat] mean and std.dev: (560.63, 465.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3524) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 282636, 44, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (216, 412, 700) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1668) [M::mem_pestat] mean and std.dev: (415.60, 272.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2152) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (144, 209, 301) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 615) [M::mem_pestat] mean and std.dev: (231.43, 113.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 772) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (388, 539, 1414) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3466) [M::mem_pestat] mean and std.dev: (679.67, 550.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4492) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (266, 402, 915) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2213) [M::mem_pestat] mean and std.dev: (533.59, 460.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2862) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 713196 reads in 275.118 CPU sec, 8.865 real sec [M::mem_process_seqs] Processed 710628 reads in 211.361 CPU sec, 6.856 real sec sorting block 0, #reads = 1072577 mem = 536884516 peak = 590307328 [M::mem_process_seqs] Processed 711412 reads in 239.837 CPU sec, 7.766 real sec [M::process] read 708820 sequences (100000081 bp) in 2.107 CPU sec, 2.226 real sec... sorting block 1, #reads = 1072627 mem = 536879247 peak = 822079488 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 282781, 40, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (273, 528, 1394) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3636) [M::mem_pestat] mean and std.dev: (803.09, 691.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4757) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 212, 309) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 637) [M::mem_pestat] mean and std.dev: (236.30, 116.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 801) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (271, 335, 849) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2005) [M::mem_pestat] mean and std.dev: (625.83, 546.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2813) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 446, 1377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3673) [M::mem_pestat] mean and std.dev: (658.12, 609.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4821) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 708106 sequences (100000176 bp) in 1.716 CPU sec, 1.735 real sec... [M::process] read 707686 sequences (100000269 bp) in 1.350 CPU sec, 1.353 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 282465, 36, 81) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 289, 1177) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3157) [M::mem_pestat] mean and std.dev: (499.52, 541.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4147) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 215, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 647) [M::mem_pestat] mean and std.dev: (239.43, 118.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 814) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (347, 495, 1787) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4667) [M::mem_pestat] mean and std.dev: (753.66, 717.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6107) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 366, 1156) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3028) [M::mem_pestat] mean and std.dev: (624.36, 647.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3964) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 710224 reads in 188.222 CPU sec, 5.975 real sec [M::mem_process_seqs] Processed 708820 reads in 129.177 CPU sec, 4.123 real sec sorting block 2, #reads = 1072086 mem = 536883953 peak = 822079488 [M::process] read 707100 sequences (100000186 bp) in 2.070 CPU sec, 2.155 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 281734, 44, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (247, 429, 1681) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4549) [M::mem_pestat] mean and std.dev: (642.80, 665.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5983) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 218, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 658) [M::mem_pestat] mean and std.dev: (242.54, 120.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 828) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (276, 1287, 1785) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4803) [M::mem_pestat] mean and std.dev: (1308.16, 1065.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6312) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (244, 409, 640) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1432) [M::mem_pestat] mean and std.dev: (430.80, 297.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1828) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706748 sequences (100000299 bp) in 1.445 CPU sec, 1.458 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 281596, 39, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (272, 373, 1105) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2771) [M::mem_pestat] mean and std.dev: (626.72, 504.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3604) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 217, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 649) [M::mem_pestat] mean and std.dev: (240.91, 119.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 816) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (427, 769, 1345) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3181) [M::mem_pestat] mean and std.dev: (801.71, 624.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4099) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 272, 829) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2061) [M::mem_pestat] mean and std.dev: (482.64, 429.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2677) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707686 reads in 178.165 CPU sec, 5.667 real sec sorting block 3, #reads = 1071219 mem = 536889660 peak = 822079488 [M::mem_process_seqs] Processed 708106 reads in 204.737 CPU sec, 6.525 real sec [M::process] read 705620 sequences (100000030 bp) in 2.031 CPU sec, 2.113 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 282047, 46, 89) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (222, 382, 732) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1752) [M::mem_pestat] mean and std.dev: (444.66, 386.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2262) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 219, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (244.06, 121.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 833) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (343, 876, 1325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3289) [M::mem_pestat] mean and std.dev: (816.12, 653.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4271) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (185, 520, 1392) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3806) [M::mem_pestat] mean and std.dev: (773.11, 745.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5013) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705002 sequences (100000209 bp) in 1.470 CPU sec, 1.466 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (100, 281419, 51, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (212, 360, 1261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3359) [M::mem_pestat] mean and std.dev: (638.82, 614.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4408) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 220, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (244.33, 121.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 833) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (342, 886, 1619) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4173) [M::mem_pestat] mean and std.dev: (1109.60, 1074.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5450) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (244, 404, 732) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1708) [M::mem_pestat] mean and std.dev: (418.98, 281.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2196) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707100 reads in 187.463 CPU sec, 5.962 real sec sorting block 4, #reads = 1072501 mem = 536886609 peak = 822079488 [M::mem_process_seqs] Processed 706748 reads in 216.700 CPU sec, 6.918 real sec sorting block 5, #reads = 1071402 mem = 536880880 peak = 822968320 [M::process] read 703904 sequences (100000168 bp) in 2.337 CPU sec, 2.402 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 280789, 48, 88) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 513, 763) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1931) [M::mem_pestat] mean and std.dev: (499.08, 365.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2515) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 222, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 669) [M::mem_pestat] mean and std.dev: (246.18, 121.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 842) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (129, 864, 1839) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5259) [M::mem_pestat] mean and std.dev: (942.07, 954.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6969) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (312, 543, 1308) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3300) [M::mem_pestat] mean and std.dev: (709.07, 550.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4296) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704576 sequences (100000111 bp) in 1.603 CPU sec, 1.611 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (73, 280167, 64, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (270, 510, 1372) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3576) [M::mem_pestat] mean and std.dev: (657.10, 608.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4678) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 226, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 669) [M::mem_pestat] mean and std.dev: (248.51, 121.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 841) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (328, 740, 1710) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4474) [M::mem_pestat] mean and std.dev: (1080.11, 923.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5856) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 441, 1386) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3734) [M::mem_pestat] mean and std.dev: (833.63, 919.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4908) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 280343, 47, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (307, 565, 1160) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2866) [M::mem_pestat] mean and std.dev: (725.17, 653.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3719) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (247.47, 122.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (205, 542, 1236) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3298) [M::mem_pestat] mean and std.dev: (601.93, 512.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4329) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (237, 306, 1113) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2865) [M::mem_pestat] mean and std.dev: (561.88, 492.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3741) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705620 reads in 281.544 CPU sec, 8.989 real sec [M::mem_process_seqs] Processed 703904 reads in 228.709 CPU sec, 7.342 real sec [M::mem_process_seqs] Processed 705002 reads in 259.014 CPU sec, 8.308 real sec sorting block 6, #reads = 1070668 mem = 536879213 peak = 822968320 [M::process] read 704318 sequences (100000064 bp) in 3.062 CPU sec, 3.217 real sec... sorting block 7, #reads = 1068376 mem = 536878571 peak = 822968320 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 280555, 36, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 641, 1249) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3341) [M::mem_pestat] mean and std.dev: (717.87, 638.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4387) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 225, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 668) [M::mem_pestat] mean and std.dev: (247.51, 121.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 840) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (306, 515, 1370) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3498) [M::mem_pestat] mean and std.dev: (702.33, 755.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4562) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (190, 343, 828) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2104) [M::mem_pestat] mean and std.dev: (512.32, 469.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2742) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704636 sequences (100000003 bp) in 2.373 CPU sec, 2.405 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (80, 280156, 55, 90) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (341, 607, 1657) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4289) [M::mem_pestat] mean and std.dev: (962.05, 894.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5605) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (246.08, 119.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 828) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (168, 514, 1007) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2685) [M::mem_pestat] mean and std.dev: (584.00, 489.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3524) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 386, 908) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2272) [M::mem_pestat] mean and std.dev: (535.71, 449.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2954) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704364 sequences (100000007 bp) in 2.110 CPU sec, 2.110 real sec... [M::mem_process_seqs] Processed 704576 reads in 210.749 CPU sec, 6.664 real sec [M::mem_process_seqs] Processed 704318 reads in 150.400 CPU sec, 4.742 real sec sorting block 8, #reads = 1066409 mem = 536881649 peak = 822968320 [M::process] read 704708 sequences (100000144 bp) in 2.952 CPU sec, 3.047 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (76, 280275, 34, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 359, 1298) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3500) [M::mem_pestat] mean and std.dev: (718.01, 797.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4601) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 656) [M::mem_pestat] mean and std.dev: (245.07, 118.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 824) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (388, 776, 2762) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7510) [M::mem_pestat] mean and std.dev: (1693.62, 2076.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9998) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 502, 1009) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2569) [M::mem_pestat] mean and std.dev: (635.03, 548.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3349) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 710270 sequences (100000122 bp) in 2.190 CPU sec, 2.189 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (78, 279779, 42, 87) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 465, 1245) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3337) [M::mem_pestat] mean and std.dev: (653.86, 622.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4383) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 668) [M::mem_pestat] mean and std.dev: (247.46, 121.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 840) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (170, 404, 1323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3629) [M::mem_pestat] mean and std.dev: (899.33, 1005.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4922) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 437, 965) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2431) [M::mem_pestat] mean and std.dev: (530.36, 417.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3164) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704636 reads in 209.347 CPU sec, 6.637 real sec sorting block 9, #reads = 1064812 mem = 536879739 peak = 822968320 [M::mem_process_seqs] Processed 704364 reads in 242.581 CPU sec, 7.710 real sec [M::process] read 710998 sequences (100000269 bp) in 2.587 CPU sec, 2.665 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 280624, 62, 89) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (145, 265, 962) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2596) [M::mem_pestat] mean and std.dev: (520.05, 562.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3413) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (246.85, 121.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 836) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (176, 799, 1406) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3866) [M::mem_pestat] mean and std.dev: (745.27, 731.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5096) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 400, 842) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2076) [M::mem_pestat] mean and std.dev: (530.49, 437.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2693) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 709588 sequences (100000048 bp) in 2.180 CPU sec, 2.182 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 281559, 41, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 429, 1146) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3076) [M::mem_pestat] mean and std.dev: (716.07, 705.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4041) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 211, 306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 628) [M::mem_pestat] mean and std.dev: (234.64, 115.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 789) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (399, 679, 1677) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4233) [M::mem_pestat] mean and std.dev: (967.34, 877.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5511) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 503, 1232) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3214) [M::mem_pestat] mean and std.dev: (714.47, 690.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4205) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704708 reads in 216.640 CPU sec, 6.864 real sec sorting block 10, #reads = 1065400 mem = 536881824 peak = 822968320 [M::mem_process_seqs] Processed 710270 reads in 252.322 CPU sec, 8.085 real sec sorting block 11, #reads = 1066214 mem = 536880357 peak = 822968320 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 282226, 29, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (204, 311, 706) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1710) [M::mem_pestat] mean and std.dev: (454.84, 382.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2212) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 213, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 638) [M::mem_pestat] mean and std.dev: (236.98, 117.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 802) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (160, 654, 2387) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6841) [M::mem_pestat] mean and std.dev: (1049.74, 1354.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9068) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 410, 1191) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3209) [M::mem_pestat] mean and std.dev: (550.03, 537.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4218) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 709636 sequences (100000008 bp) in 3.041 CPU sec, 3.143 real sec... [M::process] read 708756 sequences (100000297 bp) in 2.220 CPU sec, 2.215 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 282350, 65, 76) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 340, 1187) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3097) [M::mem_pestat] mean and std.dev: (574.47, 524.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4052) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (144, 209, 302) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 618) [M::mem_pestat] mean and std.dev: (232.48, 114.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 776) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (311, 706, 2235) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6083) [M::mem_pestat] mean and std.dev: (1258.98, 1380.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8007) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (204, 438, 1790) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4962) [M::mem_pestat] mean and std.dev: (830.07, 960.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6548) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 709588 reads in 210.440 CPU sec, 6.658 real sec [M::mem_process_seqs] Processed 710998 reads in 242.441 CPU sec, 7.694 real sec sorting block 12, #reads = 1072183 mem = 536884641 peak = 822968320 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (87, 282573, 40, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (211, 366, 873) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2197) [M::mem_pestat] mean and std.dev: (474.78, 424.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2859) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 213, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 638) [M::mem_pestat] mean and std.dev: (237.35, 117.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 802) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (355, 760, 1763) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4579) [M::mem_pestat] mean and std.dev: (932.34, 824.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5987) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 452, 1095) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2837) [M::mem_pestat] mean and std.dev: (609.49, 616.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3708) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 708586 sequences (100000178 bp) in 3.069 CPU sec, 3.173 real sec... [M::process] read 707546 sequences (100000169 bp) in 2.269 CPU sec, 2.274 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 282274, 45, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 331, 744) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1838) [M::mem_pestat] mean and std.dev: (428.21, 358.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2385) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 215, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 645) [M::mem_pestat] mean and std.dev: (239.34, 118.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 811) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (273, 424, 1149) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2901) [M::mem_pestat] mean and std.dev: (640.02, 636.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3777) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (265, 435, 1098) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2764) [M::mem_pestat] mean and std.dev: (617.15, 592.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3597) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 709636 reads in 202.783 CPU sec, 6.406 real sec sorting block 13, #reads = 1074016 mem = 536878977 peak = 822968320 [M::mem_process_seqs] Processed 708756 reads in 233.340 CPU sec, 7.401 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 282525, 48, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (157, 273, 730) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1876) [M::mem_pestat] mean and std.dev: (418.86, 389.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2449) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 215, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 648) [M::mem_pestat] mean and std.dev: (239.97, 119.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 815) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (320, 618, 1511) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3893) [M::mem_pestat] mean and std.dev: (731.12, 697.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5084) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 437, 1092) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2806) [M::mem_pestat] mean and std.dev: (691.50, 612.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3663) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706964 sequences (100000010 bp) in 3.274 CPU sec, 3.427 real sec... [M::process] read 706526 sequences (100000271 bp) in 2.210 CPU sec, 2.205 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (76, 281780, 55, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 512, 964) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2530) [M::mem_pestat] mean and std.dev: (584.90, 495.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3313) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 650) [M::mem_pestat] mean and std.dev: (241.91, 119.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 817) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (487, 800, 2193) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5605) [M::mem_pestat] mean and std.dev: (1358.19, 1273.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7311) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (235, 447, 1008) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2554) [M::mem_pestat] mean and std.dev: (569.43, 524.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3327) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 708586 reads in 203.733 CPU sec, 6.440 real sec sorting block 14, #reads = 1072495 mem = 536878942 peak = 822968320 [M::mem_process_seqs] Processed 707546 reads in 233.869 CPU sec, 7.427 real sec sorting block 15, #reads = 1072684 mem = 536882893 peak = 822968320 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 282170, 46, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 327, 727) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1825) [M::mem_pestat] mean and std.dev: (449.57, 379.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2374) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 219, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 656) [M::mem_pestat] mean and std.dev: (242.81, 120.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 825) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (171, 564, 2272) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6474) [M::mem_pestat] mean and std.dev: (1190.02, 1406.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8575) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (270, 473, 1009) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2487) [M::mem_pestat] mean and std.dev: (560.19, 464.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3226) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706638 sequences (100000224 bp) in 3.104 CPU sec, 3.177 real sec... [M::process] read 705958 sequences (100000208 bp) in 2.210 CPU sec, 2.217 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 281088, 65, 87) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 379, 978) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2522) [M::mem_pestat] mean and std.dev: (550.41, 515.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3294) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 220, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (244.57, 121.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 833) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (143, 555, 1067) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2915) [M::mem_pestat] mean and std.dev: (609.18, 593.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3839) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (271, 561, 1644) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4390) [M::mem_pestat] mean and std.dev: (869.49, 844.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5763) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706964 reads in 205.011 CPU sec, 6.480 real sec [M::mem_process_seqs] Processed 706526 reads in 236.921 CPU sec, 7.517 real sec sorting block 16, #reads = 1070972 mem = 536879323 peak = 822968320 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (86, 280796, 43, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 246, 827) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2165) [M::mem_pestat] mean and std.dev: (472.89, 467.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2834) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 221, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 663) [M::mem_pestat] mean and std.dev: (245.29, 120.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 834) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (314, 711, 1273) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3191) [M::mem_pestat] mean and std.dev: (787.62, 651.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4150) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (198, 817, 2260) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6384) [M::mem_pestat] mean and std.dev: (1147.60, 1368.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8446) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705120 sequences (100000190 bp) in 3.031 CPU sec, 3.100 real sec... [M::process] read 704672 sequences (100000162 bp) in 2.220 CPU sec, 2.217 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (79, 281272, 44, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (244, 488, 1505) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4027) [M::mem_pestat] mean and std.dev: (670.16, 685.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5288) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 220, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (243.92, 120.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 829) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (64, 325, 1152) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3328) [M::mem_pestat] mean and std.dev: (675.26, 816.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4416) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 316, 774) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1912) [M::mem_pestat] mean and std.dev: (431.86, 336.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2481) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705958 reads in 207.111 CPU sec, 6.550 real sec sorting block 17, #reads = 1069864 mem = 536881839 peak = 822968320 [M::mem_process_seqs] Processed 706638 reads in 239.392 CPU sec, 7.604 real sec [M::process] read 704994 sequences (100000136 bp) in 2.812 CPU sec, 2.906 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 280621, 56, 75) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (270, 419, 854) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2022) [M::mem_pestat] mean and std.dev: (561.71, 467.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2606) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (245.84, 120.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 828) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (336, 582, 1606) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4146) [M::mem_pestat] mean and std.dev: (965.65, 862.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5416) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (225, 346, 1306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3468) [M::mem_pestat] mean and std.dev: (710.58, 675.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4549) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705058 sequences (100000084 bp) in 2.268 CPU sec, 2.267 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 281113, 41, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 473, 1198) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3168) [M::mem_pestat] mean and std.dev: (692.40, 710.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4153) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (246.23, 120.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 832) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (277, 603, 2440) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6766) [M::mem_pestat] mean and std.dev: (1216.51, 1374.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8929) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 404, 739) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1705) [M::mem_pestat] mean and std.dev: (538.72, 426.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2246) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704672 reads in 208.355 CPU sec, 6.591 real sec sorting block 18, #reads = 1069487 mem = 536877763 peak = 822968320 [M::mem_process_seqs] Processed 705120 reads in 240.558 CPU sec, 7.639 real sec sorting block 19, #reads = 1068907 mem = 536885673 peak = 822968320 [M::process] read 704670 sequences (100000154 bp) in 2.944 CPU sec, 3.011 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 280891, 55, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (252, 819, 1294) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3378) [M::mem_pestat] mean and std.dev: (936.29, 854.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4420) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 221, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 655) [M::mem_pestat] mean and std.dev: (244.33, 119.27) [M::mem_pestat] low and high boundaries for proper pairs: (1, 823) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (218, 595, 2355) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6629) [M::mem_pestat] mean and std.dev: (1220.94, 1367.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8766) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (218, 413, 1068) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2768) [M::mem_pestat] mean and std.dev: (674.90, 654.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3618) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704672 sequences (100000170 bp) in 2.246 CPU sec, 2.256 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (80, 280542, 35, 79) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (210, 513, 966) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2478) [M::mem_pestat] mean and std.dev: (564.62, 471.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3234) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 655) [M::mem_pestat] mean and std.dev: (244.36, 119.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 823) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (221, 885, 1829) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5045) [M::mem_pestat] mean and std.dev: (1115.03, 1043.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6653) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 440, 822) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1990) [M::mem_pestat] mean and std.dev: (508.99, 399.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2574) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704994 reads in 210.990 CPU sec, 6.674 real sec [M::mem_process_seqs] Processed 705058 reads in 244.254 CPU sec, 7.752 real sec sorting block 20, #reads = 1067889 mem = 536889756 peak = 822968320 [M::process] read 706926 sequences (100000007 bp) in 2.537 CPU sec, 2.616 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (87, 280521, 50, 91) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (255, 621, 1071) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2703) [M::mem_pestat] mean and std.dev: (615.18, 425.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3519) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 658) [M::mem_pestat] mean and std.dev: (245.44, 119.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 827) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (317, 635, 1496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3854) [M::mem_pestat] mean and std.dev: (828.35, 700.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5033) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (209, 359, 988) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2546) [M::mem_pestat] mean and std.dev: (546.15, 477.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3325) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 712746 sequences (100000099 bp) in 2.240 CPU sec, 2.238 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 280553, 57, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 378, 1177) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3133) [M::mem_pestat] mean and std.dev: (651.76, 664.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4111) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (247.11, 121.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 836) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (184, 458, 1073) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2851) [M::mem_pestat] mean and std.dev: (561.94, 577.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3740) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (308, 684, 844) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1916) [M::mem_pestat] mean and std.dev: (577.02, 360.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2452) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704670 reads in 210.100 CPU sec, 6.652 real sec sorting block 21, #reads = 1067393 mem = 536881330 peak = 822968320 [M::mem_process_seqs] Processed 704672 reads in 243.335 CPU sec, 7.728 real sec [M::process] read 709890 sequences (100000088 bp) in 3.071 CPU sec, 3.157 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 282741, 47, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (158, 254, 496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1172) [M::mem_pestat] mean and std.dev: (341.13, 259.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1510) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (142, 206, 296) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 604) [M::mem_pestat] mean and std.dev: (228.04, 111.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 758) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (287, 568, 1401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3629) [M::mem_pestat] mean and std.dev: (779.89, 708.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4743) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 356, 1354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3576) [M::mem_pestat] mean and std.dev: (767.38, 791.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4687) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 708344 sequences (100000000 bp) in 2.220 CPU sec, 2.213 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 281025, 46, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (336, 641, 1795) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4713) [M::mem_pestat] mean and std.dev: (967.36, 864.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6172) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 653) [M::mem_pestat] mean and std.dev: (242.54, 120.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 821) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (502, 1079, 1970) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4906) [M::mem_pestat] mean and std.dev: (1220.98, 1015.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6374) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 413, 658) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1516) [M::mem_pestat] mean and std.dev: (442.11, 294.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1945) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 712746 reads in 214.772 CPU sec, 6.800 real sec sorting block 22, #reads = 1069430 mem = 536886086 peak = 822968320 [M::mem_process_seqs] Processed 706926 reads in 249.424 CPU sec, 7.937 real sec sorting block 23, #reads = 1069800 mem = 536881655 peak = 850358272 [M::process] read 707970 sequences (100000250 bp) in 2.658 CPU sec, 2.758 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 282309, 41, 79) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 335, 840) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2200) [M::mem_pestat] mean and std.dev: (462.44, 406.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2880) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 213, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 631) [M::mem_pestat] mean and std.dev: (235.42, 115.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 793) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (270, 581, 1856) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5028) [M::mem_pestat] mean and std.dev: (1230.88, 1429.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6949) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (202, 367, 884) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2248) [M::mem_pestat] mean and std.dev: (500.56, 417.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2930) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707724 sequences (100000281 bp) in 2.210 CPU sec, 2.203 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 282102, 58, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 502, 1465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3997) [M::mem_pestat] mean and std.dev: (674.24, 702.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5263) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 216, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 642) [M::mem_pestat] mean and std.dev: (238.97, 117.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 807) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (360, 559, 1377) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3411) [M::mem_pestat] mean and std.dev: (775.04, 641.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4428) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (257, 356, 1125) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2861) [M::mem_pestat] mean and std.dev: (618.29, 582.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3729) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 709890 reads in 206.862 CPU sec, 6.546 real sec [M::mem_process_seqs] Processed 708344 reads in 237.300 CPU sec, 7.537 real sec sorting block 24, #reads = 1072402 mem = 536878345 peak = 850358272 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (81, 281854, 32, 76) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 316, 1149) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3099) [M::mem_pestat] mean and std.dev: (583.34, 588.89) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4074) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 217, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 649) [M::mem_pestat] mean and std.dev: (240.79, 119.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 816) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (307, 691, 1474) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3808) [M::mem_pestat] mean and std.dev: (835.41, 669.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4975) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (194, 394, 892) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2288) [M::mem_pestat] mean and std.dev: (546.83, 509.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2986) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707472 sequences (100000204 bp) in 2.778 CPU sec, 2.848 real sec... [M::process] read 706508 sequences (100000067 bp) in 2.190 CPU sec, 2.187 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 281818, 46, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (309, 411, 1139) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2799) [M::mem_pestat] mean and std.dev: (699.83, 611.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3629) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 217, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 655) [M::mem_pestat] mean and std.dev: (242.05, 120.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 824) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (100, 310, 842) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2326) [M::mem_pestat] mean and std.dev: (446.02, 459.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3068) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 383, 1010) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2544) [M::mem_pestat] mean and std.dev: (534.59, 448.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3311) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707970 reads in 209.208 CPU sec, 6.658 real sec [M::mem_process_seqs] Processed 707724 reads in 146.934 CPU sec, 4.676 real sec sorting block 25, #reads = 1070619 mem = 536876690 peak = 850358272 [M::process] read 707296 sequences (100000082 bp) in 2.290 CPU sec, 2.368 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (92, 282163, 29, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (160, 340, 840) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2200) [M::mem_pestat] mean and std.dev: (455.32, 440.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2880) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 219, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 658) [M::mem_pestat] mean and std.dev: (243.11, 121.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 828) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (171, 574, 1493) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4137) [M::mem_pestat] mean and std.dev: (983.89, 1166.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5650) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (253, 416, 757) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1765) [M::mem_pestat] mean and std.dev: (534.36, 389.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2269) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705588 sequences (100000056 bp) in 2.150 CPU sec, 2.157 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 281911, 47, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (219, 534, 953) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2421) [M::mem_pestat] mean and std.dev: (642.39, 540.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3155) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 218, 316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (242.09, 120.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 820) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (595, 1369, 1767) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4111) [M::mem_pestat] mean and std.dev: (1128.43, 761.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5283) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (250, 611, 1333) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3499) [M::mem_pestat] mean and std.dev: (744.99, 640.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4582) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (99, 281231, 43, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 409, 1175) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3085) [M::mem_pestat] mean and std.dev: (677.80, 645.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4040) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 666) [M::mem_pestat] mean and std.dev: (245.38, 122.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 838) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (208, 712, 1497) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4075) [M::mem_pestat] mean and std.dev: (763.03, 834.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5364) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (182, 307, 1017) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2687) [M::mem_pestat] mean and std.dev: (479.37, 463.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3522) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707472 reads in 285.196 CPU sec, 9.099 real sec sorting block 26, #reads = 1071720 mem = 536877750 peak = 850358272 [M::mem_process_seqs] Processed 707296 reads in 229.257 CPU sec, 7.353 real sec [M::mem_process_seqs] Processed 706508 reads in 260.991 CPU sec, 8.369 real sec sorting block 27, #reads = 1070801 mem = 536881949 peak = 878850048 [M::process] read 704608 sequences (100000095 bp) in 2.608 CPU sec, 2.738 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (78, 280788, 50, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (228, 385, 765) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1839) [M::mem_pestat] mean and std.dev: (392.18, 263.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2376) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 222, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 669) [M::mem_pestat] mean and std.dev: (246.56, 122.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 842) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (215, 556, 1619) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4427) [M::mem_pestat] mean and std.dev: (1015.04, 1121.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5831) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (176, 404, 1257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3419) [M::mem_pestat] mean and std.dev: (689.71, 691.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4500) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703802 sequences (100000055 bp) in 2.465 CPU sec, 2.514 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (85, 280199, 49, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (198, 512, 1588) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4368) [M::mem_pestat] mean and std.dev: (949.27, 1054.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5758) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (247.23, 121.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 836) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (323, 536, 1180) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2894) [M::mem_pestat] mean and std.dev: (620.42, 571.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3751) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (234, 353, 1176) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3060) [M::mem_pestat] mean and std.dev: (624.54, 574.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4002) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704486 sequences (100000029 bp) in 2.090 CPU sec, 2.086 real sec... [M::mem_process_seqs] Processed 705588 reads in 204.306 CPU sec, 6.459 real sec sorting block 28, #reads = 1070890 mem = 536878453 peak = 878850048 [M::mem_process_seqs] Processed 704608 reads in 147.975 CPU sec, 4.671 real sec sorting block 29, #reads = 1068153 mem = 536879179 peak = 884187136 [M::process] read 705372 sequences (100000160 bp) in 2.690 CPU sec, 2.786 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (94, 279660, 52, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (170, 361, 857) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2231) [M::mem_pestat] mean and std.dev: (502.22, 461.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2918) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 224, 324) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 666) [M::mem_pestat] mean and std.dev: (247.66, 121.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 837) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (368, 737, 1127) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2645) [M::mem_pestat] mean and std.dev: (810.14, 651.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3416) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (269, 499, 991) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2435) [M::mem_pestat] mean and std.dev: (571.47, 490.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3157) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705092 sequences (100000165 bp) in 2.170 CPU sec, 2.167 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 281111, 52, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 362, 1783) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4935) [M::mem_pestat] mean and std.dev: (954.57, 1108.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6511) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 222, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (245.66, 120.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 828) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (349, 676, 1032) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2398) [M::mem_pestat] mean and std.dev: (740.59, 566.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3081) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (238, 280, 1127) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2905) [M::mem_pestat] mean and std.dev: (581.30, 565.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3794) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703802 reads in 199.672 CPU sec, 6.314 real sec [M::mem_process_seqs] Processed 704486 reads in 229.677 CPU sec, 7.289 real sec sorting block 30, #reads = 1067632 mem = 536878419 peak = 884187136 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 280536, 38, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (203, 556, 1354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3656) [M::mem_pestat] mean and std.dev: (801.06, 869.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4807) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 651) [M::mem_pestat] mean and std.dev: (243.33, 119.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 818) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (256, 1001, 1533) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4087) [M::mem_pestat] mean and std.dev: (1024.08, 808.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5364) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (219, 300, 728) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1746) [M::mem_pestat] mean and std.dev: (406.65, 293.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2255) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704566 sequences (100000141 bp) in 2.652 CPU sec, 2.714 real sec... [M::process] read 704568 sequences (100000079 bp) in 2.190 CPU sec, 2.186 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 280510, 29, 89) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (241, 334, 631) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1411) [M::mem_pestat] mean and std.dev: (362.06, 249.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1801) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 661) [M::mem_pestat] mean and std.dev: (245.24, 120.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 831) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (150, 605, 1627) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4581) [M::mem_pestat] mean and std.dev: (614.44, 695.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6058) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (265, 471, 1147) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2911) [M::mem_pestat] mean and std.dev: (662.19, 548.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3793) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705372 reads in 200.408 CPU sec, 6.340 real sec sorting block 31, #reads = 1067638 mem = 536883289 peak = 884187136 [M::mem_process_seqs] Processed 705092 reads in 146.133 CPU sec, 4.649 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (90, 279950, 36, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (189, 396, 740) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1842) [M::mem_pestat] mean and std.dev: (496.37, 423.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2393) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (246.73, 120.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 836) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (264, 1124, 3781) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 10815) [M::mem_pestat] mean and std.dev: (1928.86, 2273.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 14332) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 412, 1056) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2702) [M::mem_pestat] mean and std.dev: (632.88, 636.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3525) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707440 sequences (100000177 bp) in 2.679 CPU sec, 2.739 real sec... [M::process] read 713180 sequences (100000010 bp) in 2.190 CPU sec, 2.187 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (78, 280991, 41, 79) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 514, 1391) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3773) [M::mem_pestat] mean and std.dev: (732.78, 692.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4964) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (248.05, 122.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (273, 910, 1469) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3861) [M::mem_pestat] mean and std.dev: (1030.76, 1024.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5130) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 276, 887) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2235) [M::mem_pestat] mean and std.dev: (490.81, 459.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2909) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704566 reads in 197.683 CPU sec, 6.250 real sec sorting block 32, #reads = 1065598 mem = 536878486 peak = 884187136 [M::mem_process_seqs] Processed 704568 reads in 140.670 CPU sec, 4.473 real sec sorting block 33, #reads = 1066095 mem = 536878384 peak = 890564608 [M::process] read 709424 sequences (100000038 bp) in 2.949 CPU sec, 3.035 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 281084, 45, 76) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 360, 865) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2179) [M::mem_pestat] mean and std.dev: (509.76, 427.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2836) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 217, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 655) [M::mem_pestat] mean and std.dev: (242.21, 120.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 824) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (209, 787, 2240) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6302) [M::mem_pestat] mean and std.dev: (1404.23, 1750.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8404) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 325, 1107) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2909) [M::mem_pestat] mean and std.dev: (656.66, 697.67) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3810) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 708762 sequences (100000095 bp) in 2.220 CPU sec, 2.214 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (76, 282985, 38, 87) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (212, 484, 1168) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3080) [M::mem_pestat] mean and std.dev: (693.08, 592.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4036) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (142, 205, 295) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 601) [M::mem_pestat] mean and std.dev: (227.45, 111.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 754) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (139, 537, 1401) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3925) [M::mem_pestat] mean and std.dev: (610.31, 695.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5187) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (243, 427, 1216) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3162) [M::mem_pestat] mean and std.dev: (729.01, 687.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4135) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707440 reads in 206.233 CPU sec, 6.521 real sec [M::process] read 708212 sequences (100000208 bp) in 1.724 CPU sec, 1.726 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (88, 280812, 44, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (187, 382, 900) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2326) [M::mem_pestat] mean and std.dev: (501.55, 473.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3039) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 213, 308) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 632) [M::mem_pestat] mean and std.dev: (236.37, 116.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 794) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (450, 910, 1081) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2343) [M::mem_pestat] mean and std.dev: (807.12, 564.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3064) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (254, 379, 822) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1958) [M::mem_pestat] mean and std.dev: (479.73, 361.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2526) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 709424 reads in 111.030 CPU sec, 3.533 real sec sorting block 34, #reads = 1065603 mem = 536881233 peak = 890564608 [M::mem_process_seqs] Processed 713180 reads in 372.476 CPU sec, 11.841 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 281840, 40, 79) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 409, 1422) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3806) [M::mem_pestat] mean and std.dev: (719.15, 611.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4998) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 215, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 644) [M::mem_pestat] mean and std.dev: (238.95, 118.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 810) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (216, 920, 1748) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4812) [M::mem_pestat] mean and std.dev: (956.81, 804.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6344) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 334, 1189) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3109) [M::mem_pestat] mean and std.dev: (660.95, 618.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4069) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR sorting block 35, #reads = 1072640 mem = 536881926 peak = 890564608 [M::process] read 706842 sequences (100000000 bp) in 3.035 CPU sec, 3.137 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 281958, 57, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (262, 495, 1030) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2566) [M::mem_pestat] mean and std.dev: (573.61, 426.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3334) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 217, 316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (241.50, 120.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 823) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (439, 636, 1443) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3451) [M::mem_pestat] mean and std.dev: (849.49, 706.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4455) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (325, 705, 1835) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4855) [M::mem_pestat] mean and std.dev: (920.22, 940.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6365) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706236 sequences (100000204 bp) in 1.935 CPU sec, 1.935 real sec... [M::mem_process_seqs] Processed 708762 reads in 220.983 CPU sec, 7.015 real sec [M::mem_process_seqs] Processed 708212 reads in 138.456 CPU sec, 4.381 real sec sorting block 36, #reads = 1072348 mem = 536877659 peak = 890564608 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (65, 281650, 49, 77) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (184, 416, 981) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2575) [M::mem_pestat] mean and std.dev: (703.51, 666.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3372) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 219, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (243.89, 121.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 833) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (336, 669, 1535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3933) [M::mem_pestat] mean and std.dev: (830.16, 709.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5132) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 607, 1518) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4114) [M::mem_pestat] mean and std.dev: (1035.26, 1100.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5438) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705512 sequences (100000133 bp) in 2.704 CPU sec, 2.806 real sec... [M::process] read 706516 sequences (100000087 bp) in 1.989 CPU sec, 1.994 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (87, 281534, 29, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 571, 1255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3389) [M::mem_pestat] mean and std.dev: (830.64, 842.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4456) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 663) [M::mem_pestat] mean and std.dev: (245.15, 122.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 834) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (196, 242, 965) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2503) [M::mem_pestat] mean and std.dev: (508.88, 544.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3272) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (274, 602, 722) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1618) [M::mem_pestat] mean and std.dev: (529.76, 280.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2066) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706842 reads in 186.074 CPU sec, 5.887 real sec sorting block 37, #reads = 1072215 mem = 536878768 peak = 890564608 [M::mem_process_seqs] Processed 706236 reads in 134.441 CPU sec, 4.267 real sec [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (86, 281471, 35, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 405, 974) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2458) [M::mem_pestat] mean and std.dev: (457.97, 364.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3200) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 222, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 669) [M::mem_pestat] mean and std.dev: (247.00, 123.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 842) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (291, 399, 1161) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2901) [M::mem_pestat] mean and std.dev: (651.19, 624.70) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3771) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (208, 339, 888) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2248) [M::mem_pestat] mean and std.dev: (530.62, 488.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2928) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704698 sequences (100000129 bp) in 2.949 CPU sec, 3.018 real sec... [M::process] read 704178 sequences (100000023 bp) in 2.140 CPU sec, 2.146 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 281540, 60, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (164, 317, 554) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1334) [M::mem_pestat] mean and std.dev: (364.56, 283.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1724) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 656) [M::mem_pestat] mean and std.dev: (243.23, 120.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 825) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (322, 630, 1181) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2899) [M::mem_pestat] mean and std.dev: (805.11, 694.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3758) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 365, 741) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1769) [M::mem_pestat] mean and std.dev: (432.34, 333.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2283) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705512 reads in 192.497 CPU sec, 6.083 real sec sorting block 38, #reads = 1071174 mem = 536890347 peak = 890564608 [M::mem_process_seqs] Processed 706516 reads in 220.483 CPU sec, 6.998 real sec sorting block 39, #reads = 1069875 mem = 536878985 peak = 942247936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 281103, 49, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 339, 831) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2053) [M::mem_pestat] mean and std.dev: (441.16, 360.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2664) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (248.12, 122.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (231, 639, 2128) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5922) [M::mem_pestat] mean and std.dev: (780.90, 866.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7819) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 333, 1086) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2866) [M::mem_pestat] mean and std.dev: (539.81, 537.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3756) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 703904 sequences (100000260 bp) in 2.989 CPU sec, 3.063 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (86, 279888, 56, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (256, 871, 1863) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5077) [M::mem_pestat] mean and std.dev: (1235.38, 1311.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6684) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 225, 325) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 671) [M::mem_pestat] mean and std.dev: (248.23, 121.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 844) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (591, 1165, 1978) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4752) [M::mem_pestat] mean and std.dev: (1140.21, 852.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6139) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (256, 487, 909) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2215) [M::mem_pestat] mean and std.dev: (546.92, 384.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2868) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704148 sequences (100000136 bp) in 2.190 CPU sec, 2.188 real sec... [M::mem_process_seqs] Processed 704698 reads in 187.266 CPU sec, 5.920 real sec [M::mem_process_seqs] Processed 704178 reads in 217.866 CPU sec, 6.905 real sec sorting block 40, #reads = 1068510 mem = 536879122 peak = 942247936 [M::process] read 704446 sequences (100000023 bp) in 2.914 CPU sec, 2.965 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (79, 280462, 61, 81) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (224, 379, 1154) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3014) [M::mem_pestat] mean and std.dev: (637.12, 587.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3944) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (153, 225, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 660) [M::mem_pestat] mean and std.dev: (247.17, 120.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 829) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (230, 531, 1354) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3602) [M::mem_pestat] mean and std.dev: (744.98, 849.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4726) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (231, 360, 824) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2010) [M::mem_pestat] mean and std.dev: (470.41, 428.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2603) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704526 sequences (100000073 bp) in 2.190 CPU sec, 2.199 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 280254, 38, 79) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 393, 1823) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5051) [M::mem_pestat] mean and std.dev: (885.03, 1033.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6665) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (246.08, 119.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 828) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (304, 1218, 2326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6370) [M::mem_pestat] mean and std.dev: (1546.68, 1706.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8392) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (216, 406, 982) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2514) [M::mem_pestat] mean and std.dev: (527.92, 461.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3280) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 703904 reads in 194.743 CPU sec, 6.152 real sec [M::mem_process_seqs] Processed 704148 reads in 223.491 CPU sec, 7.088 real sec sorting block 41, #reads = 1066997 mem = 536881588 peak = 942247936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (82, 280481, 51, 45) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (190, 342, 816) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2068) [M::mem_pestat] mean and std.dev: (454.09, 398.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2694) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (246.03, 120.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 832) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (311, 765, 1902) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5084) [M::mem_pestat] mean and std.dev: (1080.81, 1036.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6675) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (224, 317, 670) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1562) [M::mem_pestat] mean and std.dev: (404.93, 225.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2008) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704252 sequences (100000214 bp) in 2.900 CPU sec, 3.025 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (85, 280725, 54, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (278, 498, 1156) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2912) [M::mem_pestat] mean and std.dev: (642.27, 495.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3790) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 223, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (245.53, 119.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 828) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (327, 1155, 1673) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4365) [M::mem_pestat] mean and std.dev: (1093.52, 779.45) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5711) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (196, 380, 1131) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3001) [M::mem_pestat] mean and std.dev: (590.77, 583.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3936) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704556 sequences (100000263 bp) in 2.150 CPU sec, 2.147 real sec... [M::mem_process_seqs] Processed 704446 reads in 192.264 CPU sec, 6.074 real sec sorting block 42, #reads = 1067116 mem = 536878756 peak = 942247936 [M::mem_process_seqs] Processed 704526 reads in 137.162 CPU sec, 4.356 real sec sorting block 43, #reads = 1068279 mem = 536887707 peak = 942247936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 280051, 55, 86) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (200, 486, 1323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3569) [M::mem_pestat] mean and std.dev: (526.19, 512.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4692) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 224, 323) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 665) [M::mem_pestat] mean and std.dev: (247.39, 121.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 836) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (273, 654, 2155) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5919) [M::mem_pestat] mean and std.dev: (1084.74, 1163.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7801) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 457, 1419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3803) [M::mem_pestat] mean and std.dev: (717.89, 720.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4995) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706424 sequences (100000259 bp) in 2.740 CPU sec, 2.805 real sec... [M::process] read 716440 sequences (100000206 bp) in 2.250 CPU sec, 2.245 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (73, 280546, 40, 60) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (255, 362, 856) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2058) [M::mem_pestat] mean and std.dev: (516.26, 465.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2659) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 225, 326) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 674) [M::mem_pestat] mean and std.dev: (248.61, 123.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 848) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (403, 1047, 1961) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5077) [M::mem_pestat] mean and std.dev: (1115.00, 1071.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6635) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (212, 323, 711) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1709) [M::mem_pestat] mean and std.dev: (369.00, 267.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2208) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704252 reads in 195.480 CPU sec, 6.176 real sec [M::mem_process_seqs] Processed 704556 reads in 140.348 CPU sec, 4.454 real sec sorting block 44, #reads = 1066104 mem = 536879509 peak = 942247936 [M::process] read 713632 sequences (100000199 bp) in 2.679 CPU sec, 2.720 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 281097, 43, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 287, 625) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1543) [M::mem_pestat] mean and std.dev: (401.04, 349.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2002) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 660) [M::mem_pestat] mean and std.dev: (244.56, 121.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 830) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (342, 662, 1605) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4131) [M::mem_pestat] mean and std.dev: (953.85, 878.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5394) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (286, 470, 1083) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2677) [M::mem_pestat] mean and std.dev: (601.98, 481.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3474) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 711784 sequences (100000016 bp) in 2.150 CPU sec, 2.151 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 283578, 38, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (192, 373, 682) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1662) [M::mem_pestat] mean and std.dev: (445.75, 349.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2152) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (141, 204, 295) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 603) [M::mem_pestat] mean and std.dev: (227.35, 111.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 757) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (407, 848, 2271) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5999) [M::mem_pestat] mean and std.dev: (1035.29, 906.56) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7863) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (189, 394, 1050) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2772) [M::mem_pestat] mean and std.dev: (644.31, 586.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3633) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 283912, 41, 52) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (178, 310, 809) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2071) [M::mem_pestat] mean and std.dev: (473.43, 436.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2702) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (138, 198, 283) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 573) [M::mem_pestat] mean and std.dev: (219.55, 106.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 718) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (262, 545, 1544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4108) [M::mem_pestat] mean and std.dev: (819.87, 792.88) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5390) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (178, 355, 1257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3415) [M::mem_pestat] mean and std.dev: (546.32, 538.68) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4494) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706424 reads in 296.614 CPU sec, 9.447 real sec sorting block 45, #reads = 1065635 mem = 536877790 peak = 942247936 [M::mem_process_seqs] Processed 713632 reads in 236.217 CPU sec, 7.558 real sec [M::mem_process_seqs] Processed 716440 reads in 269.505 CPU sec, 8.624 real sec [M::process] read 709824 sequences (100000151 bp) in 2.892 CPU sec, 2.999 real sec... sorting block 46, #reads = 1070321 mem = 536879153 peak = 942247936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (83, 283275, 38, 55) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (243, 498, 858) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2088) [M::mem_pestat] mean and std.dev: (510.18, 390.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2703) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (143, 208, 301) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 617) [M::mem_pestat] mean and std.dev: (231.55, 114.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 775) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (369, 784, 1799) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4659) [M::mem_pestat] mean and std.dev: (1280.58, 1167.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6089) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (227, 341, 939) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2363) [M::mem_pestat] mean and std.dev: (565.60, 565.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3075) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 709286 sequences (100000201 bp) in 2.010 CPU sec, 2.066 real sec... [M::process] read 708756 sequences (100000218 bp) in 1.590 CPU sec, 1.598 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (50, 283028, 30, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (183, 434, 1532) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4230) [M::mem_pestat] mean and std.dev: (875.34, 991.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5579) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 211, 308) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 634) [M::mem_pestat] mean and std.dev: (236.13, 117.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 797) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (322, 809, 1362) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3442) [M::mem_pestat] mean and std.dev: (620.44, 412.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4482) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (246, 490, 1749) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4755) [M::mem_pestat] mean and std.dev: (881.77, 1026.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6258) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 711784 reads in 197.442 CPU sec, 6.272 real sec [M::mem_process_seqs] Processed 709824 reads in 137.805 CPU sec, 4.373 real sec sorting block 47, #reads = 1069860 mem = 536879996 peak = 942247936 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (58, 282701, 39, 86) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (220, 361, 1119) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2917) [M::mem_pestat] mean and std.dev: (597.71, 523.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3816) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 212, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 640) [M::mem_pestat] mean and std.dev: (237.84, 118.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 805) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (266, 524, 1544) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4100) [M::mem_pestat] mean and std.dev: (827.33, 889.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5378) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 356, 1363) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3661) [M::mem_pestat] mean and std.dev: (681.64, 775.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4810) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 708862 sequences (100000131 bp) in 2.601 CPU sec, 2.694 real sec... [M::process] read 708712 sequences (100000301 bp) in 1.729 CPU sec, 1.737 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 282648, 49, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (219, 385, 1341) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3585) [M::mem_pestat] mean and std.dev: (791.44, 752.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4707) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 213, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 644) [M::mem_pestat] mean and std.dev: (239.19, 119.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 810) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (481, 958, 1785) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4393) [M::mem_pestat] mean and std.dev: (995.16, 828.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5697) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (254, 448, 876) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2120) [M::mem_pestat] mean and std.dev: (495.90, 352.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2742) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 709286 reads in 192.021 CPU sec, 6.089 real sec sorting block 48, #reads = 1070632 mem = 536880578 peak = 942247936 [M::mem_process_seqs] Processed 708756 reads in 135.853 CPU sec, 4.324 real sec sorting block 49, #reads = 1071039 mem = 536889739 peak = 960425984 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 282416, 41, 87) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 450, 629) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1505) [M::mem_pestat] mean and std.dev: (438.30, 330.77) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1943) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 214, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 647) [M::mem_pestat] mean and std.dev: (239.62, 119.66) [M::mem_pestat] low and high boundaries for proper pairs: (1, 814) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (135, 479, 1535) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4335) [M::mem_pestat] mean and std.dev: (789.37, 890.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5735) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (231, 410, 942) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2364) [M::mem_pestat] mean and std.dev: (531.91, 493.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3075) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 708330 sequences (100000222 bp) in 2.730 CPU sec, 2.788 real sec... [M::process] read 708238 sequences (100000178 bp) in 2.250 CPU sec, 2.243 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 282727, 54, 50) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (150, 334, 955) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2565) [M::mem_pestat] mean and std.dev: (559.20, 553.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3370) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 214, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 645) [M::mem_pestat] mean and std.dev: (239.74, 119.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 811) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (326, 1081, 1250) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3098) [M::mem_pestat] mean and std.dev: (828.82, 573.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4022) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (231, 717, 1754) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4800) [M::mem_pestat] mean and std.dev: (1007.75, 955.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6323) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 708712 reads in 186.877 CPU sec, 5.899 real sec [M::mem_process_seqs] Processed 708862 reads in 213.305 CPU sec, 6.757 real sec sorting block 50, #reads = 1069380 mem = 536880677 peak = 960425984 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (76, 282111, 60, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (254, 506, 1005) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2507) [M::mem_pestat] mean and std.dev: (612.68, 502.94) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3258) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 214, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 645) [M::mem_pestat] mean and std.dev: (239.68, 119.43) [M::mem_pestat] low and high boundaries for proper pairs: (1, 811) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (246, 499, 1752) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4764) [M::mem_pestat] mean and std.dev: (870.91, 947.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6270) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (206, 271, 712) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1724) [M::mem_pestat] mean and std.dev: (422.48, 339.11) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2230) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707448 sequences (100000254 bp) in 2.940 CPU sec, 3.012 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 281897, 41, 101) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 495, 688) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1682) [M::mem_pestat] mean and std.dev: (511.58, 406.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2179) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 215, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 645) [M::mem_pestat] mean and std.dev: (239.58, 119.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 811) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (289, 552, 1816) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4870) [M::mem_pestat] mean and std.dev: (1227.73, 1365.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6691) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (315, 518, 1014) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2412) [M::mem_pestat] mean and std.dev: (653.32, 471.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3111) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706114 sequences (100000282 bp) in 2.230 CPU sec, 2.234 real sec... [M::mem_process_seqs] Processed 708330 reads in 186.259 CPU sec, 5.876 real sec sorting block 51, #reads = 1070221 mem = 536880671 peak = 960425984 [M::mem_process_seqs] Processed 708238 reads in 213.772 CPU sec, 6.772 real sec [M::process] read 705888 sequences (100000070 bp) in 2.552 CPU sec, 2.625 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (80, 280597, 47, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (209, 357, 1063) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2771) [M::mem_pestat] mean and std.dev: (614.42, 599.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3625) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 650) [M::mem_pestat] mean and std.dev: (242.29, 119.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 817) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (130, 386, 1578) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4474) [M::mem_pestat] mean and std.dev: (794.35, 986.28) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5922) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (247, 337, 938) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2320) [M::mem_pestat] mean and std.dev: (549.52, 486.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3011) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705178 sequences (100000285 bp) in 1.700 CPU sec, 1.706 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (93, 281497, 45, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (176, 304, 1043) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2777) [M::mem_pestat] mean and std.dev: (615.82, 664.92) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3644) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 215, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 643) [M::mem_pestat] mean and std.dev: (240.40, 119.16) [M::mem_pestat] low and high boundaries for proper pairs: (1, 808) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (273, 650, 2941) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8277) [M::mem_pestat] mean and std.dev: (1532.95, 1676.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10945) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (233, 291, 997) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2525) [M::mem_pestat] mean and std.dev: (591.69, 516.47) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3289) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706114 reads in 197.439 CPU sec, 6.267 real sec sorting block 52, #reads = 1067105 mem = 536884993 peak = 960425984 [M::mem_process_seqs] Processed 707448 reads in 226.573 CPU sec, 7.212 real sec sorting block 53, #reads = 1066140 mem = 536886566 peak = 962011136 [M::process] read 705498 sequences (100000108 bp) in 2.649 CPU sec, 2.703 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (91, 280632, 49, 98) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (277, 517, 1069) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2653) [M::mem_pestat] mean and std.dev: (639.28, 502.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3445) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 221, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 661) [M::mem_pestat] mean and std.dev: (245.87, 121.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 831) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (166, 586, 3287) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9529) [M::mem_pestat] mean and std.dev: (1871.86, 2298.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12650) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (220, 339, 1379) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3697) [M::mem_pestat] mean and std.dev: (764.05, 871.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4856) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 710182 sequences (100000052 bp) in 1.730 CPU sec, 1.728 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (92, 280368, 57, 84) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 434, 974) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2496) [M::mem_pestat] mean and std.dev: (563.27, 540.52) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3257) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (243.89, 120.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 822) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (94, 381, 1074) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3034) [M::mem_pestat] mean and std.dev: (553.87, 600.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4014) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (195, 379, 929) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2397) [M::mem_pestat] mean and std.dev: (523.00, 470.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3131) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705178 reads in 190.797 CPU sec, 6.039 real sec [M::mem_process_seqs] Processed 705888 reads in 219.051 CPU sec, 6.956 real sec sorting block 54, #reads = 1062941 mem = 536878287 peak = 962011136 [M::process] read 721772 sequences (100000039 bp) in 2.736 CPU sec, 2.807 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (83, 282105, 49, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 333, 1008) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2662) [M::mem_pestat] mean and std.dev: (529.13, 552.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3489) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 210, 305) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 625) [M::mem_pestat] mean and std.dev: (234.42, 115.85) [M::mem_pestat] low and high boundaries for proper pairs: (1, 785) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (367, 611, 989) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2233) [M::mem_pestat] mean and std.dev: (642.70, 505.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2855) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 386, 1050) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2670) [M::mem_pestat] mean and std.dev: (670.60, 583.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3480) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 717880 sequences (100000035 bp) in 1.960 CPU sec, 1.959 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (74, 280564, 60, 76) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (179, 307, 851) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2195) [M::mem_pestat] mean and std.dev: (510.53, 506.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2867) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 221, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 663) [M::mem_pestat] mean and std.dev: (245.24, 121.40) [M::mem_pestat] low and high boundaries for proper pairs: (1, 834) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (170, 403, 1023) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2729) [M::mem_pestat] mean and std.dev: (596.69, 632.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3582) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (184, 357, 826) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2110) [M::mem_pestat] mean and std.dev: (523.11, 483.58) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2752) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 710182 reads in 215.404 CPU sec, 6.832 real sec sorting block 55, #reads = 1062398 mem = 536882223 peak = 962011136 [M::mem_process_seqs] Processed 705498 reads in 247.411 CPU sec, 7.864 real sec [M::process] read 715632 sequences (100000246 bp) in 2.846 CPU sec, 2.920 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 285761, 41, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 280, 710) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1818) [M::mem_pestat] mean and std.dev: (394.47, 333.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2372) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (134, 190, 270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 542) [M::mem_pestat] mean and std.dev: (210.28, 100.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 678) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (283, 873, 3495) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9919) [M::mem_pestat] mean and std.dev: (1771.83, 1988.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 13131) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (197, 372, 1141) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3029) [M::mem_pestat] mean and std.dev: (605.91, 616.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3973) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 713096 sequences (100000225 bp) in 2.080 CPU sec, 2.080 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (74, 285179, 47, 49) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (193, 341, 959) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2491) [M::mem_pestat] mean and std.dev: (462.62, 432.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3257) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (137, 196, 281) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 569) [M::mem_pestat] mean and std.dev: (218.23, 105.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 713) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (456, 860, 1475) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3513) [M::mem_pestat] mean and std.dev: (936.33, 753.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4532) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 516, 1866) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5146) [M::mem_pestat] mean and std.dev: (911.33, 812.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6786) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 721772 reads in 242.410 CPU sec, 7.698 real sec sorting block 56, #reads = 1061382 mem = 536879502 peak = 962011136 [M::mem_process_seqs] Processed 717880 reads in 277.475 CPU sec, 8.828 real sec sorting block 57, #reads = 1060563 mem = 536883650 peak = 989732864 [M::process] read 711312 sequences (100000199 bp) in 2.538 CPU sec, 2.610 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (64, 284387, 43, 73) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 282, 753) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1895) [M::mem_pestat] mean and std.dev: (443.61, 397.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2466) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (139, 200, 289) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 589) [M::mem_pestat] mean and std.dev: (223.60, 109.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 739) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (248, 623, 1316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3452) [M::mem_pestat] mean and std.dev: (741.55, 679.64) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4520) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 443, 1113) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2911) [M::mem_pestat] mean and std.dev: (620.09, 587.34) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3810) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 710142 sequences (100000111 bp) in 1.720 CPU sec, 1.722 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (76, 284521, 42, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (156, 230, 545) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1323) [M::mem_pestat] mean and std.dev: (344.19, 303.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1712) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (142, 204, 296) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 604) [M::mem_pestat] mean and std.dev: (228.42, 112.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 758) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (239, 1221, 2263) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6311) [M::mem_pestat] mean and std.dev: (1265.46, 1145.07) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8335) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (221, 434, 1403) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3767) [M::mem_pestat] mean and std.dev: (724.10, 678.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4949) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 715632 reads in 218.785 CPU sec, 6.955 real sec [M::mem_process_seqs] Processed 713096 reads in 250.469 CPU sec, 7.973 real sec sorting block 58, #reads = 1062443 mem = 536879711 peak = 989732864 [M::process] read 709362 sequences (100000258 bp) in 3.003 CPU sec, 3.054 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 283294, 57, 64) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (206, 359, 1086) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2846) [M::mem_pestat] mean and std.dev: (592.58, 541.02) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3726) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (144, 208, 302) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 618) [M::mem_pestat] mean and std.dev: (232.22, 114.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 776) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (363, 653, 1965) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5169) [M::mem_pestat] mean and std.dev: (1110.35, 1121.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6771) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (259, 439, 1100) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2782) [M::mem_pestat] mean and std.dev: (699.48, 653.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3623) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 709048 sequences (100000012 bp) in 2.270 CPU sec, 2.267 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (76, 283610, 38, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (186, 297, 941) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2451) [M::mem_pestat] mean and std.dev: (455.60, 443.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3206) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 210, 306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 628) [M::mem_pestat] mean and std.dev: (235.04, 116.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 789) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (306, 969, 2277) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6219) [M::mem_pestat] mean and std.dev: (1464.81, 1723.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8357) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (211, 379, 769) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1885) [M::mem_pestat] mean and std.dev: (502.01, 412.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2443) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 711312 reads in 210.687 CPU sec, 6.663 real sec sorting block 59, #reads = 1064116 mem = 536880186 peak = 989732864 [M::process] read 708286 sequences (100000276 bp) in 2.088 CPU sec, 2.097 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 282991, 47, 69) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (165, 250, 677) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1701) [M::mem_pestat] mean and std.dev: (387.33, 388.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2213) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 212, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 629) [M::mem_pestat] mean and std.dev: (235.91, 116.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 790) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (265, 578, 900) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2170) [M::mem_pestat] mean and std.dev: (571.84, 409.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2805) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (240, 324, 636) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1428) [M::mem_pestat] mean and std.dev: (401.69, 275.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1824) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 709048 reads in 121.367 CPU sec, 3.891 real sec [M::mem_process_seqs] Processed 710142 reads in 392.098 CPU sec, 12.491 real sec sorting block 60, #reads = 1066371 mem = 536884386 peak = 989732864 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 282719, 43, 94) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 379, 987) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2567) [M::mem_pestat] mean and std.dev: (514.73, 493.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3357) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 211, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 629) [M::mem_pestat] mean and std.dev: (235.80, 116.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 790) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (189, 579, 1496) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4110) [M::mem_pestat] mean and std.dev: (654.74, 633.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5417) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (201, 315, 943) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2427) [M::mem_pestat] mean and std.dev: (502.46, 539.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3169) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707190 sequences (100000205 bp) in 2.425 CPU sec, 2.566 real sec... [M::process] read 706156 sequences (100000118 bp) in 1.689 CPU sec, 1.698 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 281846, 45, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (213, 403, 917) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2325) [M::mem_pestat] mean and std.dev: (541.98, 462.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3029) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 214, 311) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 639) [M::mem_pestat] mean and std.dev: (238.98, 118.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 803) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (479, 1273, 3112) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 8378) [M::mem_pestat] mean and std.dev: (1665.64, 1543.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 11011) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (274, 394, 1149) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2899) [M::mem_pestat] mean and std.dev: (648.88, 591.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3774) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 709362 reads in 330.305 CPU sec, 10.524 real sec sorting block 61, #reads = 1066369 mem = 536889660 peak = 989732864 [M::mem_process_seqs] Processed 708286 reads in 148.513 CPU sec, 4.731 real sec [M::process] read 705446 sequences (100000201 bp) in 2.670 CPU sec, 2.763 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (79, 281095, 32, 67) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (240, 389, 1547) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4161) [M::mem_pestat] mean and std.dev: (722.04, 840.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5468) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 216, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 646) [M::mem_pestat] mean and std.dev: (241.07, 120.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 812) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (588, 861, 2998) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7818) [M::mem_pestat] mean and std.dev: (1870.48, 2273.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 10964) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (245, 358, 1140) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2930) [M::mem_pestat] mean and std.dev: (562.55, 544.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3825) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705358 sequences (100000275 bp) in 2.240 CPU sec, 2.247 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (98, 280509, 47, 76) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (191, 441, 749) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1865) [M::mem_pestat] mean and std.dev: (503.89, 396.41) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2423) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 653) [M::mem_pestat] mean and std.dev: (242.95, 120.61) [M::mem_pestat] low and high boundaries for proper pairs: (1, 821) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (468, 957, 1487) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3525) [M::mem_pestat] mean and std.dev: (954.62, 771.51) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4544) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 391, 1076) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2756) [M::mem_pestat] mean and std.dev: (643.76, 639.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3596) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707190 reads in 218.986 CPU sec, 6.944 real sec sorting block 62, #reads = 1066012 mem = 536877779 peak = 989732864 [M::mem_process_seqs] Processed 706156 reads in 251.730 CPU sec, 8.014 real sec sorting block 63, #reads = 1065437 mem = 536877181 peak = 1036845056 [M::process] read 708692 sequences (100000025 bp) in 2.816 CPU sec, 2.885 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (85, 280770, 44, 61) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (207, 386, 1553) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4245) [M::mem_pestat] mean and std.dev: (723.75, 890.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5591) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 219, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 657) [M::mem_pestat] mean and std.dev: (244.35, 121.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 826) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (380, 1438, 2353) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 6299) [M::mem_pestat] mean and std.dev: (1510.76, 1426.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 8272) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 364, 1074) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2764) [M::mem_pestat] mean and std.dev: (628.26, 624.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3609) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 715014 sequences (100000204 bp) in 2.340 CPU sec, 2.338 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (84, 280763, 50, 91) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (267, 435, 1465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3861) [M::mem_pestat] mean and std.dev: (789.96, 849.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5059) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 660) [M::mem_pestat] mean and std.dev: (245.16, 122.03) [M::mem_pestat] low and high boundaries for proper pairs: (1, 830) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (296, 613, 1118) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2762) [M::mem_pestat] mean and std.dev: (633.64, 506.18) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3584) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (247, 433, 984) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2458) [M::mem_pestat] mean and std.dev: (620.11, 593.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3195) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 280757, 64, 74) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (255, 433, 1255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3255) [M::mem_pestat] mean and std.dev: (690.04, 637.71) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4255) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 213, 309) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 635) [M::mem_pestat] mean and std.dev: (237.13, 117.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 798) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (112, 514, 1145) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3211) [M::mem_pestat] mean and std.dev: (650.21, 682.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4244) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 398, 907) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2249) [M::mem_pestat] mean and std.dev: (517.88, 416.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2920) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705446 reads in 316.848 CPU sec, 10.082 real sec [M::mem_process_seqs] Processed 705358 reads in 257.124 CPU sec, 8.219 real sec sorting block 64, #reads = 1066133 mem = 536877671 peak = 1036845056 [M::mem_process_seqs] Processed 708692 reads in 301.130 CPU sec, 9.620 real sec [M::process] read 711484 sequences (100000234 bp) in 3.206 CPU sec, 3.311 real sec... sorting block 65, #reads = 1060829 mem = 536877422 peak = 1036845056 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (59, 283691, 42, 62) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (182, 251, 685) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1691) [M::mem_pestat] mean and std.dev: (349.31, 293.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2194) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (140, 201, 289) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 587) [M::mem_pestat] mean and std.dev: (223.37, 108.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 736) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (298, 792, 1699) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4501) [M::mem_pestat] mean and std.dev: (872.00, 919.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5902) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 410, 846) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2082) [M::mem_pestat] mean and std.dev: (565.03, 447.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2700) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 710344 sequences (100000029 bp) in 2.481 CPU sec, 2.520 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 283397, 57, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (254, 470, 932) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2288) [M::mem_pestat] mean and std.dev: (579.79, 518.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2966) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (144, 208, 301) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 615) [M::mem_pestat] mean and std.dev: (231.65, 113.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 772) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (177, 636, 1414) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3888) [M::mem_pestat] mean and std.dev: (820.81, 836.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5125) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (257, 447, 894) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2168) [M::mem_pestat] mean and std.dev: (535.90, 429.99) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2805) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 709138 sequences (100000008 bp) in 2.180 CPU sec, 2.185 real sec... [M::mem_process_seqs] Processed 715014 reads in 222.728 CPU sec, 7.029 real sec [M::mem_process_seqs] Processed 711484 reads in 155.010 CPU sec, 4.901 real sec sorting block 66, #reads = 1064195 mem = 536879610 peak = 1036845056 [M::process] read 708136 sequences (100000011 bp) in 2.999 CPU sec, 3.096 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (63, 282595, 39, 79) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (232, 525, 1025) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2611) [M::mem_pestat] mean and std.dev: (595.15, 484.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3404) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (146, 213, 309) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 635) [M::mem_pestat] mean and std.dev: (237.33, 116.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 798) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (237, 534, 1024) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2598) [M::mem_pestat] mean and std.dev: (619.97, 586.39) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3385) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 368, 973) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2493) [M::mem_pestat] mean and std.dev: (604.61, 607.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3253) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707472 sequences (100000238 bp) in 2.210 CPU sec, 2.208 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (75, 282884, 49, 57) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (281, 448, 1315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3383) [M::mem_pestat] mean and std.dev: (778.99, 742.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4417) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (145, 211, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 631) [M::mem_pestat] mean and std.dev: (235.41, 116.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 793) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (220, 622, 1827) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5041) [M::mem_pestat] mean and std.dev: (1097.23, 1094.00) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6648) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (257, 363, 998) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2480) [M::mem_pestat] mean and std.dev: (604.51, 494.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3221) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 709138 reads in 209.250 CPU sec, 6.618 real sec sorting block 67, #reads = 1070187 mem = 536877565 peak = 1036845056 [M::mem_process_seqs] Processed 710344 reads in 241.138 CPU sec, 7.648 real sec [M::process] read 707712 sequences (100000274 bp) in 2.742 CPU sec, 2.837 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (90, 282459, 38, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (264, 659, 1585) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4227) [M::mem_pestat] mean and std.dev: (793.10, 747.60) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5548) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 215, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 642) [M::mem_pestat] mean and std.dev: (239.16, 118.04) [M::mem_pestat] low and high boundaries for proper pairs: (1, 807) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (440, 1066, 1477) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3551) [M::mem_pestat] mean and std.dev: (970.50, 737.57) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4588) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (278, 456, 853) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2003) [M::mem_pestat] mean and std.dev: (579.68, 383.09) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2578) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707808 sequences (100000032 bp) in 2.350 CPU sec, 2.353 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (71, 282438, 54, 72) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (236, 409, 818) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1982) [M::mem_pestat] mean and std.dev: (498.29, 413.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2564) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 217, 316) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (241.85, 119.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 820) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (428, 1195, 2802) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 7550) [M::mem_pestat] mean and std.dev: (1683.89, 1653.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 9924) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (205, 342, 1191) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3163) [M::mem_pestat] mean and std.dev: (724.38, 728.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4149) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 708136 reads in 201.109 CPU sec, 6.355 real sec sorting block 68, #reads = 1071209 mem = 536879874 peak = 1036845056 [M::mem_process_seqs] Processed 707472 reads in 230.693 CPU sec, 7.315 real sec sorting block 69, #reads = 1069899 mem = 536879493 peak = 1049694208 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (89, 282621, 38, 98) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (268, 598, 1281) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3307) [M::mem_pestat] mean and std.dev: (733.60, 623.75) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4320) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 216, 312) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 640) [M::mem_pestat] mean and std.dev: (239.58, 117.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 804) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (408, 987, 1743) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4413) [M::mem_pestat] mean and std.dev: (1130.97, 915.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5748) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (186, 292, 1138) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3042) [M::mem_pestat] mean and std.dev: (613.27, 683.62) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3994) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 707114 sequences (100000014 bp) in 3.037 CPU sec, 3.099 real sec... [M::process] read 706092 sequences (100000099 bp) in 2.270 CPU sec, 2.270 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 282211, 30, 68) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (195, 332, 1074) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2832) [M::mem_pestat] mean and std.dev: (560.34, 552.38) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3711) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 215, 311) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 639) [M::mem_pestat] mean and std.dev: (239.01, 117.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 803) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (425, 1011, 1871) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4763) [M::mem_pestat] mean and std.dev: (1178.97, 826.46) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6209) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (213, 383, 930) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2364) [M::mem_pestat] mean and std.dev: (476.98, 418.32) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3081) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707712 reads in 201.213 CPU sec, 6.353 real sec [M::mem_process_seqs] Processed 707808 reads in 233.567 CPU sec, 7.403 real sec sorting block 70, #reads = 1071619 mem = 536879122 peak = 1049694208 [M::process] read 706160 sequences (100000240 bp) in 2.769 CPU sec, 2.855 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 281798, 30, 79) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (151, 420, 1125) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3073) [M::mem_pestat] mean and std.dev: (652.98, 684.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4047) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 217, 314) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 646) [M::mem_pestat] mean and std.dev: (241.05, 119.49) [M::mem_pestat] low and high boundaries for proper pairs: (1, 812) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (588, 769, 4702) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 12930) [M::mem_pestat] mean and std.dev: (2430.30, 3075.72) [M::mem_pestat] low and high boundaries for proper pairs: (1, 17044) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (286, 472, 1279) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3265) [M::mem_pestat] mean and std.dev: (879.88, 881.29) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4405) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706036 sequences (100000078 bp) in 2.300 CPU sec, 2.297 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (69, 280907, 58, 85) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (314, 592, 1367) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3473) [M::mem_pestat] mean and std.dev: (764.77, 710.50) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4526) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 656) [M::mem_pestat] mean and std.dev: (243.67, 121.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 825) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (133, 521, 1465) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4129) [M::mem_pestat] mean and std.dev: (871.39, 810.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5461) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (266, 546, 1114) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2810) [M::mem_pestat] mean and std.dev: (693.84, 580.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3658) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (67, 280345, 48, 83) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 294, 729) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1841) [M::mem_pestat] mean and std.dev: (435.84, 356.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2397) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 653) [M::mem_pestat] mean and std.dev: (242.80, 120.36) [M::mem_pestat] low and high boundaries for proper pairs: (1, 821) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (422, 615, 1181) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2699) [M::mem_pestat] mean and std.dev: (750.39, 520.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3458) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (183, 376, 696) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1722) [M::mem_pestat] mean and std.dev: (449.20, 353.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2235) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 707114 reads in 300.226 CPU sec, 9.552 real sec sorting block 71, #reads = 1068163 mem = 536882577 peak = 1049694208 [M::mem_process_seqs] Processed 706092 reads in 239.098 CPU sec, 7.652 real sec [M::mem_process_seqs] Processed 706160 reads in 273.087 CPU sec, 8.742 real sec sorting block 72, #reads = 1066589 mem = 536881413 peak = 1049694208 [M::process] read 704856 sequences (100000217 bp) in 3.366 CPU sec, 3.496 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 280435, 51, 85) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (194, 313, 897) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2303) [M::mem_pestat] mean and std.dev: (459.44, 388.87) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3006) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (149, 218, 315) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 647) [M::mem_pestat] mean and std.dev: (242.18, 119.86) [M::mem_pestat] low and high boundaries for proper pairs: (1, 813) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (246, 818, 1720) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4668) [M::mem_pestat] mean and std.dev: (856.89, 839.10) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6142) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (228, 468, 1261) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3327) [M::mem_pestat] mean and std.dev: (695.21, 723.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4360) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705664 sequences (100000290 bp) in 2.519 CPU sec, 2.561 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 280328, 54, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (222, 535, 1269) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3363) [M::mem_pestat] mean and std.dev: (696.76, 645.48) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4410) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 220, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 658) [M::mem_pestat] mean and std.dev: (245.28, 121.37) [M::mem_pestat] low and high boundaries for proper pairs: (1, 827) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (155, 567, 972) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2606) [M::mem_pestat] mean and std.dev: (543.35, 512.97) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3423) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (292, 464, 1907) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5137) [M::mem_pestat] mean and std.dev: (953.62, 1106.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6752) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706036 reads in 221.745 CPU sec, 7.004 real sec [M::process] read 705174 sequences (100000118 bp) in 2.309 CPU sec, 2.305 real sec... sorting block 73, #reads = 1066125 mem = 536882062 peak = 1049694208 [M::mem_process_seqs] Processed 704856 reads in 158.052 CPU sec, 4.977 real sec [M::process] read 718770 sequences (100000042 bp) in 2.459 CPU sec, 2.560 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (88, 280326, 42, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (174, 344, 672) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1668) [M::mem_pestat] mean and std.dev: (416.75, 341.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2166) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 219, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 654) [M::mem_pestat] mean and std.dev: (243.78, 120.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 822) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (291, 672, 1466) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3816) [M::mem_pestat] mean and std.dev: (965.37, 970.90) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4991) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (241, 421, 1148) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2962) [M::mem_pestat] mean and std.dev: (712.52, 763.80) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3869) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 717666 sequences (100000076 bp) in 1.800 CPU sec, 1.802 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (99, 280169, 57, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (223, 397, 906) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2272) [M::mem_pestat] mean and std.dev: (514.78, 439.23) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2955) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 220, 319) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 657) [M::mem_pestat] mean and std.dev: (244.79, 121.53) [M::mem_pestat] low and high boundaries for proper pairs: (1, 826) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (358, 525, 1474) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3706) [M::mem_pestat] mean and std.dev: (655.80, 510.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4822) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (229, 451, 1257) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3313) [M::mem_pestat] mean and std.dev: (714.49, 675.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4341) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (57, 284129, 52, 80) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (199, 432, 916) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2350) [M::mem_pestat] mean and std.dev: (526.62, 501.14) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3067) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (136, 194, 277) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 559) [M::mem_pestat] mean and std.dev: (215.17, 103.54) [M::mem_pestat] low and high boundaries for proper pairs: (1, 700) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (333, 845, 1376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3462) [M::mem_pestat] mean and std.dev: (715.24, 618.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4505) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (222, 585, 1419) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3813) [M::mem_pestat] mean and std.dev: (758.03, 787.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5010) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705664 reads in 348.149 CPU sec, 11.122 real sec sorting block 74, #reads = 1064182 mem = 536883330 peak = 1049694208 [M::mem_process_seqs] Processed 705174 reads in 285.198 CPU sec, 9.165 real sec sorting block 75, #reads = 1061940 mem = 536880546 peak = 1094008832 [M::mem_process_seqs] Processed 718770 reads in 331.875 CPU sec, 10.650 real sec [M::process] read 714238 sequences (100000072 bp) in 2.715 CPU sec, 2.814 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (55, 284970, 33, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 445, 974) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2492) [M::mem_pestat] mean and std.dev: (635.36, 551.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3251) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (137, 197, 284) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 578) [M::mem_pestat] mean and std.dev: (219.67, 107.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 725) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (216, 676, 3203) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 9177) [M::mem_pestat] mean and std.dev: (1483.42, 1670.78) [M::mem_pestat] low and high boundaries for proper pairs: (1, 12164) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (232, 359, 1850) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5086) [M::mem_pestat] mean and std.dev: (1045.23, 1200.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6704) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 711964 sequences (100000012 bp) in 2.647 CPU sec, 2.686 real sec... [M::process] read 710598 sequences (100000296 bp) in 2.280 CPU sec, 2.282 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (72, 283938, 44, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (197, 398, 1590) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4376) [M::mem_pestat] mean and std.dev: (797.06, 915.98) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5769) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (140, 203, 294) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 602) [M::mem_pestat] mean and std.dev: (226.74, 111.91) [M::mem_pestat] low and high boundaries for proper pairs: (1, 756) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (381, 787, 1510) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3768) [M::mem_pestat] mean and std.dev: (932.61, 808.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4897) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (244, 397, 1492) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3988) [M::mem_pestat] mean and std.dev: (758.69, 793.84) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5236) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 717666 reads in 254.997 CPU sec, 8.060 real sec sorting block 76, #reads = 1054278 mem = 536880504 peak = 1094008832 [M::mem_process_seqs] Processed 714238 reads in 181.395 CPU sec, 5.766 real sec sorting block 77, #reads = 1060329 mem = 536884535 peak = 1097129984 [M::process] read 708504 sequences (100000226 bp) in 2.988 CPU sec, 3.068 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 282534, 26, 70) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 440, 1415) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3815) [M::mem_pestat] mean and std.dev: (742.35, 771.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5015) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (143, 208, 302) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 620) [M::mem_pestat] mean and std.dev: (232.38, 115.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 779) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (196, 895, 1243) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3337) [M::mem_pestat] mean and std.dev: (853.69, 671.96) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4384) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (300, 488, 743) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1629) [M::mem_pestat] mean and std.dev: (520.08, 343.83) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2072) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 708342 sequences (100000030 bp) in 2.320 CPU sec, 2.325 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (62, 282604, 42, 82) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (166, 368, 548) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1312) [M::mem_pestat] mean and std.dev: (357.18, 272.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1694) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (144, 210, 307) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 633) [M::mem_pestat] mean and std.dev: (235.36, 117.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 796) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (303, 893, 1253) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3153) [M::mem_pestat] mean and std.dev: (871.23, 775.26) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4103) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (226, 449, 724) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1720) [M::mem_pestat] mean and std.dev: (460.68, 320.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2218) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 711964 reads in 231.878 CPU sec, 7.342 real sec [M::mem_process_seqs] Processed 710598 reads in 266.890 CPU sec, 8.481 real sec sorting block 78, #reads = 1061590 mem = 536882134 peak = 1097129984 [M::process] read 707020 sequences (100000061 bp) in 2.670 CPU sec, 2.726 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (79, 281551, 55, 58) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (219, 364, 1270) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3372) [M::mem_pestat] mean and std.dev: (851.79, 906.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4479) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 214, 310) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 636) [M::mem_pestat] mean and std.dev: (238.47, 118.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 799) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (281, 738, 1437) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3749) [M::mem_pestat] mean and std.dev: (739.90, 620.59) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4905) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (230, 418, 894) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2222) [M::mem_pestat] mean and std.dev: (538.39, 455.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2886) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 706258 sequences (100000024 bp) in 2.270 CPU sec, 2.274 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (87, 282484, 53, 79) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (230, 491, 1065) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2735) [M::mem_pestat] mean and std.dev: (714.94, 694.81) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3570) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (147, 214, 313) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 645) [M::mem_pestat] mean and std.dev: (239.67, 119.24) [M::mem_pestat] low and high boundaries for proper pairs: (1, 811) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (201, 439, 1911) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5331) [M::mem_pestat] mean and std.dev: (835.60, 1077.01) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7041) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (255, 529, 1129) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2877) [M::mem_pestat] mean and std.dev: (625.99, 553.63) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3751) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 708342 reads in 226.110 CPU sec, 7.159 real sec sorting block 79, #reads = 1062482 mem = 536884913 peak = 1097129984 [M::mem_process_seqs] Processed 708504 reads in 261.318 CPU sec, 8.296 real sec [M::process] read 705768 sequences (100000123 bp) in 3.053 CPU sec, 3.126 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (68, 280605, 49, 66) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (208, 420, 1172) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3100) [M::mem_pestat] mean and std.dev: (662.30, 678.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4064) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 219, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 651) [M::mem_pestat] mean and std.dev: (243.09, 120.21) [M::mem_pestat] low and high boundaries for proper pairs: (1, 818) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (150, 337, 932) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2496) [M::mem_pestat] mean and std.dev: (364.76, 313.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3278) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (191, 311, 604) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1430) [M::mem_pestat] mean and std.dev: (341.54, 217.55) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1843) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 705066 sequences (100000186 bp) in 2.300 CPU sec, 2.299 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (61, 281618, 42, 78) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (185, 244, 957) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2501) [M::mem_pestat] mean and std.dev: (441.67, 491.13) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3273) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (148, 217, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 658) [M::mem_pestat] mean and std.dev: (243.17, 121.44) [M::mem_pestat] low and high boundaries for proper pairs: (1, 828) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (138, 456, 1398) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3918) [M::mem_pestat] mean and std.dev: (723.32, 876.08) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5178) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (236, 397, 1139) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2945) [M::mem_pestat] mean and std.dev: (638.59, 678.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3848) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 706258 reads in 223.889 CPU sec, 7.092 real sec sorting block 80, #reads = 1063977 mem = 536885199 peak = 1097129984 [M::mem_process_seqs] Processed 707020 reads in 258.272 CPU sec, 8.204 real sec sorting block 81, #reads = 1061849 mem = 536888185 peak = 1127165952 [M::process] read 704342 sequences (100000066 bp) in 2.160 CPU sec, 2.256 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (80, 280417, 36, 56) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (215, 407, 1376) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3698) [M::mem_pestat] mean and std.dev: (722.22, 797.73) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4859) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (150, 219, 317) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 651) [M::mem_pestat] mean and std.dev: (243.42, 120.30) [M::mem_pestat] low and high boundaries for proper pairs: (1, 818) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (142, 747, 1669) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4723) [M::mem_pestat] mean and std.dev: (676.43, 725.79) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6250) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (199, 293, 1170) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3112) [M::mem_pestat] mean and std.dev: (629.91, 604.05) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4083) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 704394 sequences (100000105 bp) in 1.750 CPU sec, 1.754 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (92, 279899, 48, 87) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (159, 392, 976) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2610) [M::mem_pestat] mean and std.dev: (592.88, 593.76) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3427) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 220, 318) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 652) [M::mem_pestat] mean and std.dev: (244.11, 120.15) [M::mem_pestat] low and high boundaries for proper pairs: (1, 819) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (247, 515, 1854) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5068) [M::mem_pestat] mean and std.dev: (979.85, 1029.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 6675) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (214, 309, 660) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1552) [M::mem_pestat] mean and std.dev: (390.49, 279.93) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1998) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 705768 reads in 192.773 CPU sec, 6.113 real sec sorting block 82, #reads = 1062797 mem = 536878295 peak = 1127165952 [M::mem_process_seqs] Processed 705066 reads in 220.268 CPU sec, 7.004 real sec [M::process] read 704548 sequences (100000014 bp) in 2.367 CPU sec, 2.435 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (54, 280211, 32, 76) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (140, 321, 890) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2390) [M::mem_pestat] mean and std.dev: (466.38, 445.20) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3140) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 222, 320) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 656) [M::mem_pestat] mean and std.dev: (245.61, 120.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 824) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (162, 362, 1255) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3441) [M::mem_pestat] mean and std.dev: (574.13, 563.33) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4534) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (169, 313, 606) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1480) [M::mem_pestat] mean and std.dev: (390.07, 311.69) [M::mem_pestat] low and high boundaries for proper pairs: (1, 1917) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::process] read 542836 sequences (77004503 bp) in 1.340 CPU sec, 1.345 real sec... [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (99, 280481, 31, 65) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (181, 379, 1167) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3139) [M::mem_pestat] mean and std.dev: (644.98, 625.42) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4125) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 222, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 659) [M::mem_pestat] mean and std.dev: (245.90, 121.12) [M::mem_pestat] low and high boundaries for proper pairs: (1, 828) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (103, 535, 1982) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 5740) [M::mem_pestat] mean and std.dev: (827.52, 1180.17) [M::mem_pestat] low and high boundaries for proper pairs: (1, 7619) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (181, 350, 717) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1789) [M::mem_pestat] mean and std.dev: (457.88, 394.06) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2325) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 704342 reads in 180.824 CPU sec, 5.746 real sec sorting block 83, #reads = 1063720 mem = 536878808 peak = 1127165952 [M::mem_process_seqs] Processed 704394 reads in 207.900 CPU sec, 6.628 real sec sorting block 84, #reads = 1063200 mem = 536880519 peak = 1127165952 [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (66, 215804, 32, 71) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (188, 454, 706) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 1742) [M::mem_pestat] mean and std.dev: (442.05, 289.95) [M::mem_pestat] low and high boundaries for proper pairs: (1, 2260) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (151, 222, 321) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 661) [M::mem_pestat] mean and std.dev: (246.26, 122.19) [M::mem_pestat] low and high boundaries for proper pairs: (1, 831) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (197, 398, 1170) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3116) [M::mem_pestat] mean and std.dev: (571.24, 459.82) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4089) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (278, 424, 998) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2438) [M::mem_pestat] mean and std.dev: (705.07, 649.35) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3302) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_pestat] # candidate unique pairs for (FF, FR, RF, RR): (95, 280393, 67, 63) [M::mem_pestat] analyzing insert size distribution for orientation FF... [M::mem_pestat] (25, 50, 75) percentile: (173, 271, 886) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 2312) [M::mem_pestat] mean and std.dev: (506.14, 542.31) [M::mem_pestat] low and high boundaries for proper pairs: (1, 3025) [M::mem_pestat] analyzing insert size distribution for orientation FR... [M::mem_pestat] (25, 50, 75) percentile: (152, 222, 322) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 662) [M::mem_pestat] mean and std.dev: (246.97, 122.25) [M::mem_pestat] low and high boundaries for proper pairs: (1, 832) [M::mem_pestat] analyzing insert size distribution for orientation RF... [M::mem_pestat] (25, 50, 75) percentile: (371, 968, 1713) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 4397) [M::mem_pestat] mean and std.dev: (1021.89, 843.22) [M::mem_pestat] low and high boundaries for proper pairs: (1, 5739) [M::mem_pestat] analyzing insert size distribution for orientation RR... [M::mem_pestat] (25, 50, 75) percentile: (207, 407, 1306) [M::mem_pestat] low and high boundaries for computing mean and std.dev: (1, 3504) [M::mem_pestat] mean and std.dev: (776.28, 781.74) [M::mem_pestat] low and high boundaries for proper pairs: (1, 4603) [M::mem_pestat] skip orientation FF [M::mem_pestat] skip orientation RF [M::mem_pestat] skip orientation RR [M::mem_process_seqs] Processed 542836 reads in 177.886 CPU sec, 5.746 real sec [M::mem_process_seqs] Processed 704548 reads in 207.654 CPU sec, 6.718 real sec sorting block 85, #reads = 1065635 mem = 536880034 peak = 1127165952 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000c06f2 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: INTEL(R) XEON(R) PLATINUM 8559C threads: 31 algo: bwa-mem license: sentieon:klib=31 reads: 91149976 overall: 71105843200 mem 16367.563 user 314.878 sys 544.283 real [main] Version: 0.7.17-r1188 [main] CMD: /opt/conda/share/sentieon-202308.03-3/libexec/bwa mem -K 100000000 -Y -R @RG\tID:A23MHWWLT4.1136_3WJ-T1-TDNA-1_A23MHWWLT4_1.L005\tPU:L005\tSM:1136_3WJ-T1-TDNA-1_A23MHWWLT4_1\tLB:1136_3WJ-T1-TDNA-1_A23MHWWLT4_1\tDS:s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta\tPL:ILLUMINA -t 31 ./BWAIndex/Homo_sapiens_assembly38.fasta.64 1136_3WJ-T1-TDNA-1_A23MHWWLT4_1_R1.fastq.gz 1136_3WJ-T1-TDNA-1_A23MHWWLT4_1_R2.fastq.gz [main] Real time: 544.324 sec; CPU: 16682.445 sec sorting block 86, #reads = 211265 mem = 106367283 peak = 1127165952 uniq header count 1 merging 87 blocks sw version: sentieon-genomics-202308.03 os version: Linux 6.12.88 cpu vendor: GenuineIntel signature: 000c06f2 features: bfebfbff 7ffefbff extended: f3bfb7ef fb417ffe amd bits: 2c100800 00000121 brand: INTEL(R) XEON(R) PLATINUM 8559C threads: 31 max 192 algo: util-sort license: sentieon:util=1 output file size: 5541661694 output reads: 92022377 bam_mem_sort: 87 calls 44.108 user 0.781 sys 45.036 real bam_write: 87 calls 26.659 user 1.584 sys 28.391 real execute: 1 calls 27.636 user 1.533 sys 583.424 real merge_files: 1 calls 27.625 user 1.492 sys 38.974 real parse_chunk: 1380 calls 73.654 user 16.761 sys 91.462 real read_chunk: 3740 calls 35.785 user 28.552 sys 498.725 real sort_block: 1 calls 25.822 user 28.111 sys 483.642 real write_chunk: 2358 calls 27.275 user 1.283 sys 38.096 real overall: 3351252992 mem 1515.954 user 60.055 sys 583.447 real ls: cannot access '*.cram': No such file or directory